Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL445584.3-201ENST00000617173 78 ntBASIC-0.34□□□□□ -2.46
HDAC3O15379 MIR124-2-201ENST00000385081 109 ntBASIC-0.35□□□□□ -2.47
HDAC3O15379 RNU7-174P-201ENST00000516248 59 ntBASIC-0.35□□□□□ -2.47
HDAC3O15379 SNORD22.1-201ENST00000516331 125 ntBASIC-0.35□□□□□ -2.47
HDAC3O15379 SNORD14C-201ENST00000365382 88 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 SNORA62.4-201ENST00000365504 151 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 SNORD116-24-201ENST00000384549 92 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 MIR154-201ENST00000385243 84 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 MIR889-201ENST00000401280 79 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 IGLVI-20-201ENST00000519296 130 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 U7.4-201ENST00000614961 63 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.36□□□□□ -2.47
HDAC3O15379 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 RNU6-24P-201ENST00000384440 107 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 MIR518B-201ENST00000385127 83 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 MIR204-201ENST00000385200 110 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 RNU6-721P-201ENST00000410155 105 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 RNU6-284P-201ENST00000411105 106 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 RNU6-523P-201ENST00000516304 54 ntBASIC-0.37□□□□□ -2.47
HDAC3O15379 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.38□□□□□ -2.47
HDAC3O15379 MTND4LP1-201ENST00000446263 157 ntBASIC-0.38□□□□□ -2.47
HDAC3O15379 MIR4436A-201ENST00000585278 85 ntBASIC-0.38□□□□□ -2.47
HDAC3O15379 AC108676.2-201ENST00000605225 163 ntBASIC-0.38□□□□□ -2.47
HDAC3O15379 U4.4-201ENST00000620626 117 ntBASIC-0.38□□□□□ -2.47
HDAC3O15379 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 RNU6-668P-201ENST00000364180 107 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 RNU6-411P-201ENST00000384451 107 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 MIR3179-1-201ENST00000578940 84 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 MIR3179-2-201ENST00000579107 84 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 MIR3179-3-201ENST00000579566 84 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 MIR548V-201ENST00000584165 80 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 MIR3179-4-201ENST00000617599 84 ntBASIC-0.39□□□□□ -2.47
HDAC3O15379 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.4□□□□□ -2.47
HDAC3O15379 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.4□□□□□ -2.47
HDAC3O15379 MIR517B-201ENST00000385102 67 ntBASIC-0.4□□□□□ -2.47
HDAC3O15379 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.4□□□□□ -2.47
HDAC3O15379 SNORA3B-201ENST00000391305 131 ntBASIC-0.4□□□□□ -2.47
HDAC3O15379 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.41□□□□□ -2.48
HDAC3O15379 RNU6-895P-201ENST00000384125 103 ntBASIC-0.41□□□□□ -2.48
HDAC3O15379 MIR630-201ENST00000384957 97 ntBASIC-0.41□□□□□ -2.48
HDAC3O15379 SNORD75.1-201ENST00000408373 60 ntBASIC-0.41□□□□□ -2.48
HDAC3O15379 AP000533.3-201ENST00000447704 118 ntBASIC-0.41□□□□□ -2.48
HDAC3O15379 MIR4802-201ENST00000581881 80 ntBASIC-0.41□□□□□ -2.48
HDAC3O15379 RNU6-698P-201ENST00000363523 107 ntBASIC-0.42□□□□□ -2.48
HDAC3O15379 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.42□□□□□ -2.48
HDAC3O15379 RNU6-34P-201ENST00000364874 107 ntBASIC-0.42□□□□□ -2.48
HDAC3O15379 RNU6-246P-201ENST00000384702 107 ntBASIC-0.42□□□□□ -2.48
HDAC3O15379 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
HDAC3O15379 SNORD74.6-201ENST00000364796 70 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 RNU6-540P-201ENST00000384622 101 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 RNU6-634P-201ENST00000459134 106 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 SNORD18.2-201ENST00000459604 70 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 MIR4645-201ENST00000583158 77 ntBASIC-0.43□□□□□ -2.48
HDAC3O15379 SNORD114-14-201ENST00000362723 75 ntBASIC-0.44□□□□□ -2.48
HDAC3O15379 RNA5SP215-201ENST00000363440 122 ntBASIC-0.44□□□□□ -2.48
HDAC3O15379 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
HDAC3O15379 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.44□□□□□ -2.48
HDAC3O15379 SNORA13-201ENST00000458790 133 ntBASIC-0.44□□□□□ -2.48
HDAC3O15379 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.44□□□□□ -2.48
HDAC3O15379 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.45□□□□□ -2.48
HDAC3O15379 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.45□□□□□ -2.48
HDAC3O15379 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.45□□□□□ -2.48
HDAC3O15379 SNORD113-2-201ENST00000391082 72 ntBASIC-0.46□□□□□ -2.48
HDAC3O15379 RNU7-88P-201ENST00000458752 63 ntBASIC-0.46□□□□□ -2.48
HDAC3O15379 AC021146.6-201ENST00000514659 117 ntBASIC-0.46□□□□□ -2.48
HDAC3O15379 SNORA72.7-201ENST00000516349 94 ntBASIC-0.46□□□□□ -2.48
HDAC3O15379 RNU6-924P-201ENST00000362926 108 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 SNORD114-17-201ENST00000364699 75 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 RNU6-458P-201ENST00000384179 107 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 RNU6-663P-201ENST00000391105 106 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 U7.5-201ENST00000517224 61 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 MIR5589-201ENST00000579442 60 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 U6.58-201ENST00000613107 107 ntBASIC-0.47□□□□□ -2.48
HDAC3O15379 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.48□□□□□ -2.49
HDAC3O15379 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.48□□□□□ -2.49
HDAC3O15379 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.48□□□□□ -2.49
HDAC3O15379 MIR527-201ENST00000385244 85 ntBASIC-0.48□□□□□ -2.49
HDAC3O15379 MIR4636-201ENST00000582271 80 ntBASIC-0.48□□□□□ -2.49
HDAC3O15379 RNU6-776P-201ENST00000364403 104 ntBASIC-0.49□□□□□ -2.49
HDAC3O15379 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.49□□□□□ -2.49
HDAC3O15379 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.49□□□□□ -2.49
HDAC3O15379 SNORA41B-201ENST00000384785 128 ntBASIC-0.49□□□□□ -2.49
HDAC3O15379 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.49□□□□□ -2.49
HDAC3O15379 AP001180.6-201ENST00000584918 159 ntBASIC-0.49□□□□□ -2.49
HDAC3O15379 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.5□□□□□ -2.49
HDAC3O15379 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
HDAC3O15379 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
HDAC3O15379 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
HDAC3O15379 RNU6-630P-201ENST00000391258 106 ntBASIC-0.51□□□□□ -2.49
HDAC3O15379 SNORD30.1-201ENST00000391309 70 ntBASIC-0.51□□□□□ -2.49
HDAC3O15379 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.51□□□□□ -2.49
HDAC3O15379 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.52□□□□□ -2.49
HDAC3O15379 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 296.6 ms