Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU7-188P-201ENST00000517063 64 ntBASIC1.05□□□□□ -2.24
ZC3H4Q9UPT8 AC243829.6-201ENST00000612652 106 ntBASIC1.05□□□□□ -2.24
ZC3H4Q9UPT8 MIR6086-201ENST00000638065 55 ntBASIC1.05□□□□□ -2.24
ZC3H4Q9UPT8 RNU6-987P-201ENST00000384759 104 ntBASIC1.04□□□□□ -2.24
ZC3H4Q9UPT8 RNU7-129P-201ENST00000516128 62 ntBASIC1.04□□□□□ -2.24
ZC3H4Q9UPT8 RNU6-614P-201ENST00000384369 107 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 RNU6-1232P-201ENST00000516299 86 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 CYP3A54P-201ENST00000566950 75 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 U6.59-201ENST00000615686 107 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 MIR760-201ENST00000390220 80 ntBASIC1.02□□□□□ -2.25
ZC3H4Q9UPT8 MIR4711-201ENST00000578274 70 ntBASIC1.02□□□□□ -2.25
ZC3H4Q9UPT8 SNORD60.1-201ENST00000362451 73 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 RNU4-37P-201ENST00000410214 84 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 RNU6-122P-201ENST00000516818 107 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 U4.4-201ENST00000620626 117 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 MIR1197-201ENST00000408818 88 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 RNA5SP193-201ENST00000410353 107 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 RNU6-518P-201ENST00000516056 96 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 AC084368.1-201ENST00000620935 65 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 SNORA9.1-201ENST00000362412 131 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 Y_RNA.246-201ENST00000364495 108 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 MIR6755-201ENST00000619993 66 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 AC090617.8-201ENST00000623339 167 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 RNU6-829P-201ENST00000363700 112 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 MIR501-201ENST00000390204 84 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 SNORD2-201ENST00000459163 69 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 MIR4677-201ENST00000584153 80 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 MIR1255B2-201ENST00000408618 67 ntBASIC0.96□□□□□ -2.26
ZC3H4Q9UPT8 MIR6835-201ENST00000621552 64 ntBASIC0.96□□□□□ -2.26
ZC3H4Q9UPT8 AL021921.1-201ENST00000442774 93 ntBASIC0.95□□□□□ -2.26
ZC3H4Q9UPT8 MIR3938-201ENST00000582157 103 ntBASIC0.95□□□□□ -2.26
ZC3H4Q9UPT8 RNA5SP347-201ENST00000362445 119 ntBASIC0.94□□□□□ -2.26
ZC3H4Q9UPT8 MIR508-201ENST00000384857 115 ntBASIC0.94□□□□□ -2.26
ZC3H4Q9UPT8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-1036P-201ENST00000383959 104 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-1246P-201ENST00000391064 107 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 MIR2909-201ENST00000617113 69 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 Y_RNA.325-201ENST00000365171 122 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-945P-201ENST00000383947 107 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 MIR499B-201ENST00000636498 73 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
ZC3H4Q9UPT8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
ZC3H4Q9UPT8 RNA5SP128-201ENST00000365305 116 ntBASIC0.9□□□□□ -2.26
ZC3H4Q9UPT8 MIR6773-201ENST00000612812 74 ntBASIC0.9□□□□□ -2.26
ZC3H4Q9UPT8 AC243829.3-201ENST00000622177 108 ntBASIC0.9□□□□□ -2.26
ZC3H4Q9UPT8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-175P-201ENST00000516896 107 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 Y_RNA.236-201ENST00000364427 111 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 SNORA49-201ENST00000386157 136 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR548AD-201ENST00000584780 82 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR519A2-201ENST00000384990 87 ntBASIC0.87□□□□□ -2.27
ZC3H4Q9UPT8 MIR527-201ENST00000385244 85 ntBASIC0.87□□□□□ -2.27
ZC3H4Q9UPT8 SNORA41B-201ENST00000384785 128 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-337P-201ENST00000391243 106 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-848P-201ENST00000515948 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-617P-201ENST00000516147 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-473P-201ENST00000516164 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-141P-201ENST00000410499 105 ntBASIC0.85□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-446P-201ENST00000362827 106 ntBASIC0.84□□□□□ -2.28
ZC3H4Q9UPT8 RN7SL660P-201ENST00000614852 299 ntBASIC0.84□□□□□ -2.28
ZC3H4Q9UPT8 SNORD115-25-201ENST00000362619 82 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-30P-201ENST00000384561 107 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-782P-201ENST00000516852 104 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 MIR3925-201ENST00000584674 77 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-863P-201ENST00000515989 104 ntBASIC0.82□□□□□ -2.28
ZC3H4Q9UPT8 SCARNA11.2-201ENST00000517183 154 ntBASIC0.82□□□□□ -2.28
ZC3H4Q9UPT8 AP000676.1-201ENST00000533307 52 ntBASIC0.82□□□□□ -2.28
ZC3H4Q9UPT8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
ZC3H4Q9UPT8 SNORD44.1-201ENST00000363202 61 ntBASIC0.81□□□□□ -2.28
ZC3H4Q9UPT8 MIRLET7B-201ENST00000385140 83 ntBASIC0.81□□□□□ -2.28
ZC3H4Q9UPT8 Y_RNA.74-201ENST00000362911 99 ntBASIC0.8□□□□□ -2.28
ZC3H4Q9UPT8 SNORA68.3-201ENST00000515906 83 ntBASIC0.8□□□□□ -2.28
ZC3H4Q9UPT8 RNA5SP285-201ENST00000516619 119 ntBASIC0.8□□□□□ -2.28
ZC3H4Q9UPT8 MIR103A1-201ENST00000362165 78 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-502P-201ENST00000362419 108 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 RNU7-154P-201ENST00000516194 62 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 MIR876-201ENST00000401147 81 ntBASIC0.77□□□□□ -2.29
ZC3H4Q9UPT8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.77□□□□□ -2.29
ZC3H4Q9UPT8 RNA5SP470-201ENST00000516463 106 ntBASIC0.77□□□□□ -2.29
ZC3H4Q9UPT8 RNU6-1312P-201ENST00000362425 108 ntBASIC0.76□□□□□ -2.29
ZC3H4Q9UPT8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.76□□□□□ -2.29
ZC3H4Q9UPT8 MIR5087-201ENST00000635826 76 ntBASIC0.76□□□□□ -2.29
ZC3H4Q9UPT8 Y_RNA.282-201ENST00000364793 102 ntBASIC0.75□□□□□ -2.29
ZC3H4Q9UPT8 SNORD116-16-201ENST00000384533 92 ntBASIC0.75□□□□□ -2.29
ZC3H4Q9UPT8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.75□□□□□ -2.29
ZC3H4Q9UPT8 RNU7-119P-201ENST00000459279 63 ntBASIC0.74□□□□□ -2.29
ZC3H4Q9UPT8 SNORD113-4-201ENST00000364802 75 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 RNA5SP331-201ENST00000364986 107 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 RNU6-520P-201ENST00000384717 104 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 SNORD116.2-201ENST00000391251 93 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 snoR1.1-201ENST00000628177 80 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 MIR643-201ENST00000385267 97 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 404.3 ms