Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR513C-201ENST00000401352 84 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 RNU7-153P-201ENST00000516455 62 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 RNU6-340P-201ENST00000364005 107 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 RNU6-861P-201ENST00000516745 106 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.74-201ENST00000362911 99 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.272-201ENST00000364696 102 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 MIR548A3-201ENST00000385297 97 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 AL450471.1-201ENST00000447509 127 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.668-201ENST00000516233 93 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 RNU7-174P-201ENST00000516248 59 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 RNU6-752P-201ENST00000516376 102 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 RNU6-1061P-201ENST00000516530 99 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 AP001340.1-201ENST00000624405 217 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 MIR3170-201ENST00000582699 77 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 AC008737.2-201ENST00000599446 118 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 SNORD58C-201ENST00000365223 64 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 SNORD115-31-201ENST00000365318 82 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 SNORD58A-201ENST00000383875 65 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 AC013734.1-201ENST00000619329 111 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 RNU6-766P-201ENST00000362478 107 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 RNU6-682P-201ENST00000363843 106 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 AC062037.2-201ENST00000610137 73 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 RNU6-587P-201ENST00000391282 106 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 SNORA81.3-201ENST00000517283 198 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 MIR3144-201ENST00000579460 79 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 MIR23C-201ENST00000579846 100 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 U6.97-201ENST00000636904 101 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 MIR4723-201ENST00000585070 81 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 U4.4-201ENST00000620626 117 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 MIR5009-201ENST00000578736 100 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 U7.2-201ENST00000607576 63 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.07□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.07□□□□□ -2.74
VAPAQ9P0L0 RNU6-118P-201ENST00000516552 102 ntBASIC-2.07□□□□□ -2.74
VAPAQ9P0L0 MIR606-201ENST00000384851 96 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR1302-3-201ENST00000408128 138 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR1236-201ENST00000408340 102 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 snoU13.10-201ENST00000459301 103 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 RNU6-982P-201ENST00000516216 102 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR4679-2-201ENST00000578358 77 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR548W-201ENST00000581970 74 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 AC005520.4-201ENST00000604337 90 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 RNU6-330P-201ENST00000363015 107 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-681P-201ENST00000364012 104 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-247P-201ENST00000362636 107 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 RNU6-880P-201ENST00000384526 107 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 MIR1207-201ENST00000408249 87 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 MIR3139-201ENST00000579145 76 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 MIR548V-201ENST00000584165 80 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 RNY4P27-201ENST00000363341 96 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 RNU6-887P-201ENST00000410660 100 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 MTCYBP9-201ENST00000431021 303 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 MIR429-201ENST00000362106 83 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 SNORD77.2-201ENST00000391045 68 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 RNU6-972P-201ENST00000391208 107 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 MIR548X2-201ENST00000579776 100 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 SNORD116-18-201ENST00000383961 92 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 MIR630-201ENST00000384957 97 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 MIR548AA1-201ENST00000384971 97 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 MIR568-201ENST00000385036 95 ntBASIC-2.14□□□□□ -2.75
VAPAQ9P0L0 RNY3P8-201ENST00000411366 126 ntBASIC-2.14□□□□□ -2.75
VAPAQ9P0L0 RNU6-698P-201ENST00000363523 107 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 RNU6-34P-201ENST00000364874 107 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 MIR579-201ENST00000385221 98 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 290.6 ms