Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-663P-201ENST00000391105 106 ntBASIC0.27□□□□□ -2.37
NCKIPSDQ9NZQ3 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
NCKIPSDQ9NZQ3 SNORD30.1-201ENST00000391309 70 ntBASIC0.26□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6-656P-201ENST00000516785 107 ntBASIC0.26□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6-175P-201ENST00000516896 107 ntBASIC0.26□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6-668P-201ENST00000364180 107 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR106A-201ENST00000384870 81 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR892B-201ENST00000401279 77 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 snoU13.13-201ENST00000458842 104 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6-982P-201ENST00000516216 102 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR4315-1-201ENST00000636800 73 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR4315-2-201ENST00000640925 73 ntBASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6-35P-201ENST00000384530 107 ntBASIC0.24□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
NCKIPSDQ9NZQ3 RNA5SP285-201ENST00000516619 119 ntBASIC0.24□□□□□ -2.37
NCKIPSDQ9NZQ3 SNORD116-24-201ENST00000384549 92 ntBASIC0.23□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.23□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR4743-201ENST00000584576 69 ntBASIC0.23□□□□□ -2.37
NCKIPSDQ9NZQ3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
NCKIPSDQ9NZQ3 RN7SL660P-201ENST00000614852 299 ntBASIC0.23□□□□□ -2.37
NCKIPSDQ9NZQ3 U6.111-201ENST00000636093 83 ntBASIC0.23□□□□□ -2.37
NCKIPSDQ9NZQ3 RNA5SP215-201ENST00000363440 122 ntBASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 SNORA33.1-201ENST00000364957 130 ntBASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6-590P-201ENST00000365039 107 ntBASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 MIR643-201ENST00000385267 97 ntBASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 U6.96-201ENST00000636425 70 ntBASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.22□□□□□ -2.37
NCKIPSDQ9NZQ3 SNORA25.4-201ENST00000363666 124 ntBASIC0.21□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.21□□□□□ -2.38
NCKIPSDQ9NZQ3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.21□□□□□ -2.38
NCKIPSDQ9NZQ3 AC139453.2-201ENST00000487255 133 ntBASIC0.21□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.21□□□□□ -2.38
NCKIPSDQ9NZQ3 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
NCKIPSDQ9NZQ3 SNORA49-201ENST00000386157 136 ntBASIC0.2□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-630P-201ENST00000391258 106 ntBASIC0.2□□□□□ -2.38
NCKIPSDQ9NZQ3 MIR6086-201ENST00000638065 55 ntBASIC0.2□□□□□ -2.38
NCKIPSDQ9NZQ3 RNA5SP98-201ENST00000363158 137 ntBASIC0.19□□□□□ -2.38
NCKIPSDQ9NZQ3 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-800P-201ENST00000384473 103 ntBASIC0.19□□□□□ -2.38
NCKIPSDQ9NZQ3 MIR329-2-201ENST00000385029 84 ntBASIC0.19□□□□□ -2.38
NCKIPSDQ9NZQ3 HAR1A.1-201ENST00000459583 118 ntBASIC0.19□□□□□ -2.38
NCKIPSDQ9NZQ3 CR383656.4-201ENST00000546909 122 ntBASIC0.19□□□□□ -2.38
NCKIPSDQ9NZQ3 SNORD115-25-201ENST00000362619 82 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 RNA5SP299-201ENST00000391203 116 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-542P-201ENST00000516405 103 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-180P-201ENST00000516697 61 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 CYP3A54P-201ENST00000566950 75 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 MIR6773-201ENST00000612812 74 ntBASIC0.18□□□□□ -2.38
NCKIPSDQ9NZQ3 RNA5SP476-201ENST00000516613 103 ntBASIC0.17□□□□□ -2.38
NCKIPSDQ9NZQ3 AC005520.4-201ENST00000604337 90 ntBASIC0.17□□□□□ -2.38
NCKIPSDQ9NZQ3 AC104408.1-201ENST00000605241 170 ntBASIC0.17□□□□□ -2.38
NCKIPSDQ9NZQ3 MIR148A-201ENST00000362215 68 ntBASIC0.16□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-502P-201ENST00000362419 108 ntBASIC0.16□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-302P-201ENST00000365249 107 ntBASIC0.16□□□□□ -2.38
NCKIPSDQ9NZQ3 MIR1265-201ENST00000408444 86 ntBASIC0.16□□□□□ -2.38
NCKIPSDQ9NZQ3 RNA5SP470-201ENST00000516463 106 ntBASIC0.16□□□□□ -2.38
NCKIPSDQ9NZQ3 U2.7-201ENST00000619197 100 ntBASIC0.16□□□□□ -2.38
NCKIPSDQ9NZQ3 RNU6-337P-201ENST00000391243 106 ntBASIC0.15□□□□□ -2.39
NCKIPSDQ9NZQ3 RNA5SP163-201ENST00000410304 99 ntBASIC0.15□□□□□ -2.39
NCKIPSDQ9NZQ3 AL021921.1-201ENST00000442774 93 ntBASIC0.15□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR6514-201ENST00000622549 70 ntBASIC0.15□□□□□ -2.39
NCKIPSDQ9NZQ3 AC103706.3-201ENST00000636297 85 ntBASIC0.15□□□□□ -2.39
NCKIPSDQ9NZQ3 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6-471P-201ENST00000383944 106 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR548C-201ENST00000384815 97 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR517B-201ENST00000385102 67 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 MIRLET7B-201ENST00000385140 83 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6-788P-201ENST00000390967 104 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR371B-201ENST00000638082 66 ntBASIC0.14□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6-698P-201ENST00000363523 107 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6-34P-201ENST00000364874 107 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU7-165P-201ENST00000458864 60 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU7-174P-201ENST00000516248 59 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR4511-201ENST00000582784 87 ntBASIC0.13□□□□□ -2.39
NCKIPSDQ9NZQ3 SNORD114-5-201ENST00000362928 70 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 Y_RNA.185-201ENST00000363894 100 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR593-201ENST00000384856 100 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR1255B2-201ENST00000408618 67 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU7-159P-201ENST00000459284 62 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 AC125388.1-201ENST00000459631 156 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 AP000676.1-201ENST00000533307 52 ntBASIC0.12□□□□□ -2.39
NCKIPSDQ9NZQ3 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU7-154P-201ENST00000516194 62 ntBASIC0.11□□□□□ -2.39
NCKIPSDQ9NZQ3 AC090617.8-201ENST00000623339 167 ntBASIC0.11□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6-900P-201ENST00000384498 102 ntBASIC0.1□□□□□ -2.39
NCKIPSDQ9NZQ3 SNORD113-2-201ENST00000391082 72 ntBASIC0.1□□□□□ -2.39
NCKIPSDQ9NZQ3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.1□□□□□ -2.39
NCKIPSDQ9NZQ3 RNU6-518P-201ENST00000516056 96 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 324.6 ms