Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.33□□□□□ -2.46
NDE1Q9NXR1 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.33□□□□□ -2.46
NDE1Q9NXR1 MIR5582-201ENST00000579697 68 ntBASIC-0.33□□□□□ -2.46
NDE1Q9NXR1 AC090617.8-201ENST00000623339 167 ntBASIC-0.33□□□□□ -2.46
NDE1Q9NXR1 U6.96-201ENST00000636425 70 ntBASIC-0.33□□□□□ -2.46
NDE1Q9NXR1 RNU6-478P-201ENST00000363904 110 ntBASIC-0.34□□□□□ -2.46
NDE1Q9NXR1 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.34□□□□□ -2.46
NDE1Q9NXR1 RNA5SP266-201ENST00000410273 108 ntBASIC-0.34□□□□□ -2.46
NDE1Q9NXR1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.34□□□□□ -2.46
NDE1Q9NXR1 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.34□□□□□ -2.46
NDE1Q9NXR1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.34□□□□□ -2.46
NDE1Q9NXR1 MIR494-201ENST00000349529 81 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 RNU6-681P-201ENST00000364012 104 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 SNORA33.1-201ENST00000364957 130 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 RNU6-294P-201ENST00000364999 102 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 MIRLET7B-201ENST00000385140 83 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 MIR5588-201ENST00000581890 63 ntBASIC-0.35□□□□□ -2.47
NDE1Q9NXR1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
NDE1Q9NXR1 RNU6-129P-201ENST00000391022 107 ntBASIC-0.36□□□□□ -2.47
NDE1Q9NXR1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.36□□□□□ -2.47
NDE1Q9NXR1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.36□□□□□ -2.47
NDE1Q9NXR1 MIR5704-201ENST00000584029 77 ntBASIC-0.36□□□□□ -2.47
NDE1Q9NXR1 RNU6-330P-201ENST00000363015 107 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 RNU6-686P-201ENST00000364839 107 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 AC096531.1-201ENST00000419107 107 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 AC022137.1-201ENST00000483735 151 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 RNU6-752P-201ENST00000516376 102 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 RNU6-557P-201ENST00000516842 110 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 AL391099.1-201ENST00000624635 187 ntBASIC-0.37□□□□□ -2.47
NDE1Q9NXR1 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.38□□□□□ -2.47
NDE1Q9NXR1 MIR548AX-201ENST00000580117 73 ntBASIC-0.38□□□□□ -2.47
NDE1Q9NXR1 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 RNU6-973P-201ENST00000364690 107 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 RNU6-979P-201ENST00000383896 107 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 SNORD57-201ENST00000448188 72 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 MIR4484-201ENST00000582855 83 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 snoR1.1-201ENST00000628177 80 ntBASIC-0.39□□□□□ -2.47
NDE1Q9NXR1 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 RNU6-303P-201ENST00000517091 106 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 MIR4280-201ENST00000582178 76 ntBASIC-0.4□□□□□ -2.47
NDE1Q9NXR1 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 SNORA8.1-201ENST00000384250 140 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 MIR8068-201ENST00000618032 68 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 AC093726.3-201ENST00000637588 150 ntBASIC-0.41□□□□□ -2.48
NDE1Q9NXR1 SNORD115-23-201ENST00000364461 82 ntBASIC-0.42□□□□□ -2.48
NDE1Q9NXR1 RNA5SP170-201ENST00000517150 101 ntBASIC-0.42□□□□□ -2.48
NDE1Q9NXR1 MIR4432-201ENST00000581823 84 ntBASIC-0.42□□□□□ -2.48
NDE1Q9NXR1 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.43□□□□□ -2.48
NDE1Q9NXR1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.43□□□□□ -2.48
NDE1Q9NXR1 MIR450A2-201ENST00000385022 100 ntBASIC-0.43□□□□□ -2.48
NDE1Q9NXR1 MIR1255B2-201ENST00000408618 67 ntBASIC-0.43□□□□□ -2.48
NDE1Q9NXR1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.43□□□□□ -2.48
NDE1Q9NXR1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.43□□□□□ -2.48
NDE1Q9NXR1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 MIR521-2-201ENST00000384818 87 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 AC074348.1-201ENST00000426503 132 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 AC114755.3-201ENST00000481111 251 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 RNY1P9-201ENST00000532431 109 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 CYP3A54P-201ENST00000566950 75 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 MIR6739-201ENST00000622461 75 ntBASIC-0.44□□□□□ -2.48
NDE1Q9NXR1 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
NDE1Q9NXR1 RNU7-171P-201ENST00000459581 62 ntBASIC-0.45□□□□□ -2.48
NDE1Q9NXR1 MIR3675-201ENST00000583661 73 ntBASIC-0.45□□□□□ -2.48
NDE1Q9NXR1 AC062037.1-201ENST00000605302 128 ntBASIC-0.45□□□□□ -2.48
NDE1Q9NXR1 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
NDE1Q9NXR1 RNU6-604P-201ENST00000390917 100 ntBASIC-0.46□□□□□ -2.48
NDE1Q9NXR1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.46□□□□□ -2.48
NDE1Q9NXR1 MIR6854-201ENST00000614935 69 ntBASIC-0.46□□□□□ -2.48
NDE1Q9NXR1 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.47□□□□□ -2.48
NDE1Q9NXR1 RNU6-242P-201ENST00000384359 107 ntBASIC-0.47□□□□□ -2.48
NDE1Q9NXR1 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
NDE1Q9NXR1 MIR204-201ENST00000385200 110 ntBASIC-0.47□□□□□ -2.48
NDE1Q9NXR1 AL353803.5-201ENST00000599815 141 ntBASIC-0.47□□□□□ -2.48
NDE1Q9NXR1 RNU6-656P-201ENST00000516785 107 ntBASIC-0.48□□□□□ -2.49
NDE1Q9NXR1 RNU6-315P-201ENST00000362666 107 ntBASIC-0.49□□□□□ -2.49
NDE1Q9NXR1 SNORD45.1-201ENST00000363181 77 ntBASIC-0.49□□□□□ -2.49
NDE1Q9NXR1 RNU6-645P-201ENST00000364649 106 ntBASIC-0.49□□□□□ -2.49
NDE1Q9NXR1 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
NDE1Q9NXR1 MT-TQ-201ENST00000387372 72 ntBASIC-0.49□□□□□ -2.49
NDE1Q9NXR1 MIR664A-201ENST00000626086 82 ntBASIC-0.49□□□□□ -2.49
NDE1Q9NXR1 RNU6-380P-201ENST00000410207 107 ntBASIC-0.5□□□□□ -2.49
NDE1Q9NXR1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
NDE1Q9NXR1 RNU6-807P-201ENST00000516805 107 ntBASIC-0.5□□□□□ -2.49
NDE1Q9NXR1 MIR4712-201ENST00000583750 82 ntBASIC-0.5□□□□□ -2.49
NDE1Q9NXR1 MIR1468-201ENST00000410600 86 ntBASIC-0.51□□□□□ -2.49
NDE1Q9NXR1 RNU6-518P-201ENST00000516056 96 ntBASIC-0.51□□□□□ -2.49
NDE1Q9NXR1 RNU6-982P-201ENST00000516216 102 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 347.7 ms