Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SNORA26.2-201ENST00000390922 122 ntBASIC-0.35□□□□□ -2.47
MKS1Q9NXB0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.35□□□□□ -2.47
MKS1Q9NXB0 MIR521-2-201ENST00000384818 87 ntBASIC-0.36□□□□□ -2.47
MKS1Q9NXB0 MIRLET7B-201ENST00000385140 83 ntBASIC-0.36□□□□□ -2.47
MKS1Q9NXB0 RNY4P29-201ENST00000410801 97 ntBASIC-0.36□□□□□ -2.47
MKS1Q9NXB0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.36□□□□□ -2.47
MKS1Q9NXB0 MIR4484-201ENST00000582855 83 ntBASIC-0.36□□□□□ -2.47
MKS1Q9NXB0 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.37□□□□□ -2.47
MKS1Q9NXB0 RNU6-787P-201ENST00000384032 107 ntBASIC-0.37□□□□□ -2.47
MKS1Q9NXB0 AL590491.3-201ENST00000610731 82 ntBASIC-0.38□□□□□ -2.47
MKS1Q9NXB0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.39□□□□□ -2.47
MKS1Q9NXB0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.39□□□□□ -2.47
MKS1Q9NXB0 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.4□□□□□ -2.47
MKS1Q9NXB0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.4□□□□□ -2.47
MKS1Q9NXB0 AC090617.8-201ENST00000623339 167 ntBASIC-0.4□□□□□ -2.47
MKS1Q9NXB0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 RNU6-901P-201ENST00000384593 106 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 uc_338.36-201ENST00000622331 158 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 AL391099.1-201ENST00000624635 187 ntBASIC-0.41□□□□□ -2.48
MKS1Q9NXB0 MIR1302-4-201ENST00000408701 150 ntBASIC-0.42□□□□□ -2.48
MKS1Q9NXB0 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.42□□□□□ -2.48
MKS1Q9NXB0 RNA5SP285-201ENST00000516619 119 ntBASIC-0.42□□□□□ -2.48
MKS1Q9NXB0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.42□□□□□ -2.48
MKS1Q9NXB0 MIR6759-201ENST00000638110 65 ntBASIC-0.42□□□□□ -2.48
MKS1Q9NXB0 RNA5SP173-201ENST00000364857 136 ntBASIC-0.43□□□□□ -2.48
MKS1Q9NXB0 SNORD56B-201ENST00000384713 71 ntBASIC-0.43□□□□□ -2.48
MKS1Q9NXB0 MIR4679-1-201ENST00000637619 75 ntBASIC-0.43□□□□□ -2.48
MKS1Q9NXB0 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
MKS1Q9NXB0 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.44□□□□□ -2.48
MKS1Q9NXB0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
MKS1Q9NXB0 RNA5SP66-201ENST00000517178 101 ntBASIC-0.44□□□□□ -2.48
MKS1Q9NXB0 snoR1.1-201ENST00000628177 80 ntBASIC-0.44□□□□□ -2.48
MKS1Q9NXB0 MIR3202-2-201ENST00000635980 79 ntBASIC-0.44□□□□□ -2.48
MKS1Q9NXB0 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.45□□□□□ -2.48
MKS1Q9NXB0 SNORD45.1-201ENST00000363181 77 ntBASIC-0.45□□□□□ -2.48
MKS1Q9NXB0 SNORD115-23-201ENST00000364461 82 ntBASIC-0.45□□□□□ -2.48
MKS1Q9NXB0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
MKS1Q9NXB0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
MKS1Q9NXB0 CYP3A54P-201ENST00000566950 75 ntBASIC-0.45□□□□□ -2.48
MKS1Q9NXB0 RNU6-573P-201ENST00000383938 106 ntBASIC-0.46□□□□□ -2.48
MKS1Q9NXB0 AC096531.1-201ENST00000419107 107 ntBASIC-0.46□□□□□ -2.48
MKS1Q9NXB0 SCARNA18B-201ENST00000458806 135 ntBASIC-0.46□□□□□ -2.48
MKS1Q9NXB0 RNU6-656P-201ENST00000516785 107 ntBASIC-0.46□□□□□ -2.48
MKS1Q9NXB0 RNU6-604P-201ENST00000390917 100 ntBASIC-0.47□□□□□ -2.48
MKS1Q9NXB0 AL445193.1-201ENST00000441183 141 ntBASIC-0.47□□□□□ -2.48
MKS1Q9NXB0 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
MKS1Q9NXB0 MIR4645-201ENST00000583158 77 ntBASIC-0.47□□□□□ -2.48
MKS1Q9NXB0 RNU6-645P-201ENST00000364649 106 ntBASIC-0.48□□□□□ -2.49
MKS1Q9NXB0 MIR1255B2-201ENST00000408618 67 ntBASIC-0.49□□□□□ -2.49
MKS1Q9NXB0 MIR4280-201ENST00000582178 76 ntBASIC-0.49□□□□□ -2.49
MKS1Q9NXB0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.5□□□□□ -2.49
MKS1Q9NXB0 RNA5SP470-201ENST00000516463 106 ntBASIC-0.5□□□□□ -2.49
MKS1Q9NXB0 MIR8064-201ENST00000612863 90 ntBASIC-0.5□□□□□ -2.49
MKS1Q9NXB0 AC093726.3-201ENST00000637588 150 ntBASIC-0.5□□□□□ -2.49
MKS1Q9NXB0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.51□□□□□ -2.49
MKS1Q9NXB0 MIR664A-201ENST00000626086 82 ntBASIC-0.52□□□□□ -2.49
MKS1Q9NXB0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.53□□□□□ -2.49
MKS1Q9NXB0 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.53□□□□□ -2.49
MKS1Q9NXB0 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.53□□□□□ -2.49
MKS1Q9NXB0 MIR5704-201ENST00000584029 77 ntBASIC-0.53□□□□□ -2.49
MKS1Q9NXB0 MIR8053-201ENST00000613344 75 ntBASIC-0.53□□□□□ -2.49
MKS1Q9NXB0 MIR6851-201ENST00000617060 67 ntBASIC-0.54□□□□□ -2.5
MKS1Q9NXB0 SNORD115-22-201ENST00000364456 82 ntBASIC-0.55□□□□□ -2.5
MKS1Q9NXB0 RNU6-982P-201ENST00000516216 102 ntBASIC-0.55□□□□□ -2.5
MKS1Q9NXB0 MIR6854-201ENST00000614935 69 ntBASIC-0.55□□□□□ -2.5
MKS1Q9NXB0 RNU6-228P-201ENST00000362700 106 ntBASIC-0.56□□□□□ -2.5
MKS1Q9NXB0 SNORD14C-201ENST00000365382 88 ntBASIC-0.56□□□□□ -2.5
MKS1Q9NXB0 RNU6-70P-201ENST00000516438 60 ntBASIC-0.56□□□□□ -2.5
MKS1Q9NXB0 RNU6-881P-201ENST00000516813 102 ntBASIC-0.56□□□□□ -2.5
MKS1Q9NXB0 AL353803.5-201ENST00000599815 141 ntBASIC-0.56□□□□□ -2.5
MKS1Q9NXB0 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.57□□□□□ -2.5
MKS1Q9NXB0 SNORA62.4-201ENST00000365504 151 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 MIR1255A-201ENST00000408338 113 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 AL021921.1-201ENST00000442774 93 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 AC114755.3-201ENST00000481111 251 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 AP001180.6-201ENST00000584918 159 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 U2.7-201ENST00000619197 100 ntBASIC-0.58□□□□□ -2.5
MKS1Q9NXB0 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.59□□□□□ -2.5
MKS1Q9NXB0 SNORD126-201ENST00000459475 77 ntBASIC-0.59□□□□□ -2.5
MKS1Q9NXB0 RNU7-154P-201ENST00000516194 62 ntBASIC-0.59□□□□□ -2.5
MKS1Q9NXB0 MIR5589-201ENST00000579442 60 ntBASIC-0.59□□□□□ -2.5
MKS1Q9NXB0 MIR4802-201ENST00000581881 80 ntBASIC-0.59□□□□□ -2.5
MKS1Q9NXB0 MIR8068-201ENST00000618032 68 ntBASIC-0.59□□□□□ -2.5
MKS1Q9NXB0 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 MIR196A2-201ENST00000385189 110 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 SNORD78.1-201ENST00000390866 65 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 RNU6-518P-201ENST00000516056 96 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 MIR3134-201ENST00000579433 74 ntBASIC-0.6□□□□□ -2.51
MKS1Q9NXB0 SNORD113.1-201ENST00000363280 73 ntBASIC-0.61□□□□□ -2.51
MKS1Q9NXB0 SNORD45A-201ENST00000384512 84 ntBASIC-0.61□□□□□ -2.51
MKS1Q9NXB0 MIR519A2-201ENST00000384990 87 ntBASIC-0.61□□□□□ -2.51
MKS1Q9NXB0 U7.4-201ENST00000614961 63 ntBASIC-0.61□□□□□ -2.51
MKS1Q9NXB0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms