Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.07□□□□□ -2.58
CCL28Q9NRJ3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.07□□□□□ -2.58
CCL28Q9NRJ3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.07□□□□□ -2.58
CCL28Q9NRJ3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.07□□□□□ -2.58
CCL28Q9NRJ3 MIR6739-201ENST00000622461 75 ntBASIC-1.07□□□□□ -2.58
CCL28Q9NRJ3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.08□□□□□ -2.58
CCL28Q9NRJ3 SNORD64-201ENST00000386683 67 ntBASIC-1.08□□□□□ -2.58
CCL28Q9NRJ3 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.08□□□□□ -2.58
CCL28Q9NRJ3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.08□□□□□ -2.58
CCL28Q9NRJ3 RNU7-154P-201ENST00000516194 62 ntBASIC-1.08□□□□□ -2.58
CCL28Q9NRJ3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
CCL28Q9NRJ3 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.09□□□□□ -2.58
CCL28Q9NRJ3 RNU6-22P-201ENST00000384355 107 ntBASIC-1.1□□□□□ -2.59
CCL28Q9NRJ3 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.1□□□□□ -2.59
CCL28Q9NRJ3 MT-TR-201ENST00000387439 65 ntBASIC-1.1□□□□□ -2.59
CCL28Q9NRJ3 RNA5SP476-201ENST00000516613 103 ntBASIC-1.1□□□□□ -2.59
CCL28Q9NRJ3 MIR378F-201ENST00000578143 78 ntBASIC-1.1□□□□□ -2.59
CCL28Q9NRJ3 MIR2052-201ENST00000636055 55 ntBASIC-1.1□□□□□ -2.59
CCL28Q9NRJ3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.11□□□□□ -2.59
CCL28Q9NRJ3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.11□□□□□ -2.59
CCL28Q9NRJ3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CCL28Q9NRJ3 MIR548M-201ENST00000408260 86 ntBASIC-1.11□□□□□ -2.59
CCL28Q9NRJ3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.11□□□□□ -2.59
CCL28Q9NRJ3 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.11□□□□□ -2.59
CCL28Q9NRJ3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.12□□□□□ -2.59
CCL28Q9NRJ3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.12□□□□□ -2.59
CCL28Q9NRJ3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.12□□□□□ -2.59
CCL28Q9NRJ3 AC140658.3-201ENST00000567603 271 ntBASIC-1.12□□□□□ -2.59
CCL28Q9NRJ3 AL035461.1-201ENST00000421490 332 ntBASIC-1.13□□□□□ -2.59
CCL28Q9NRJ3 AL031737.1-201ENST00000450125 223 ntBASIC-1.13□□□□□ -2.59
CCL28Q9NRJ3 RNU6-518P-201ENST00000516056 96 ntBASIC-1.13□□□□□ -2.59
CCL28Q9NRJ3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.13□□□□□ -2.59
CCL28Q9NRJ3 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.13□□□□□ -2.59
CCL28Q9NRJ3 MIR382-201ENST00000637119 76 ntBASIC-1.13□□□□□ -2.59
CCL28Q9NRJ3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.14□□□□□ -2.59
CCL28Q9NRJ3 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.14□□□□□ -2.59
CCL28Q9NRJ3 MIR4668-201ENST00000582284 70 ntBASIC-1.14□□□□□ -2.59
CCL28Q9NRJ3 MIR519A2-201ENST00000384990 87 ntBASIC-1.15□□□□□ -2.59
CCL28Q9NRJ3 AL021921.1-201ENST00000442774 93 ntBASIC-1.15□□□□□ -2.59
CCL28Q9NRJ3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.15□□□□□ -2.59
CCL28Q9NRJ3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.15□□□□□ -2.59
CCL28Q9NRJ3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.15□□□□□ -2.59
CCL28Q9NRJ3 MIR6738-201ENST00000619620 64 ntBASIC-1.15□□□□□ -2.59
CCL28Q9NRJ3 MIR587-201ENST00000384845 96 ntBASIC-1.16□□□□□ -2.6
CCL28Q9NRJ3 RNU6-313P-201ENST00000516317 112 ntBASIC-1.16□□□□□ -2.6
CCL28Q9NRJ3 MIR4324-201ENST00000584846 72 ntBASIC-1.16□□□□□ -2.6
CCL28Q9NRJ3 MIR450A1-201ENST00000362262 91 ntBASIC-1.17□□□□□ -2.6
CCL28Q9NRJ3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.17□□□□□ -2.6
CCL28Q9NRJ3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.17□□□□□ -2.6
CCL28Q9NRJ3 HAR1A.1-201ENST00000459583 118 ntBASIC-1.17□□□□□ -2.6
CCL28Q9NRJ3 AC093729.1-201ENST00000513074 128 ntBASIC-1.18□□□□□ -2.6
CCL28Q9NRJ3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.19□□□□□ -2.6
CCL28Q9NRJ3 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.19□□□□□ -2.6
CCL28Q9NRJ3 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.19□□□□□ -2.6
CCL28Q9NRJ3 MIR4306-201ENST00000583390 91 ntBASIC-1.19□□□□□ -2.6
CCL28Q9NRJ3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.2□□□□□ -2.6
CCL28Q9NRJ3 SNORD115-33-201ENST00000363723 82 ntBASIC-1.2□□□□□ -2.6
CCL28Q9NRJ3 SNORD116-22-201ENST00000384430 92 ntBASIC-1.2□□□□□ -2.6
CCL28Q9NRJ3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.2□□□□□ -2.6
CCL28Q9NRJ3 SNORA40.13-201ENST00000516379 120 ntBASIC-1.2□□□□□ -2.6
CCL28Q9NRJ3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.2□□□□□ -2.6
CCL28Q9NRJ3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.21□□□□□ -2.6
CCL28Q9NRJ3 AP001318.4-201ENST00000616637 121 ntBASIC-1.21□□□□□ -2.6
CCL28Q9NRJ3 MALAT1.1-201ENST00000618249 95 ntBASIC-1.21□□□□□ -2.6
CCL28Q9NRJ3 AC132825.6-201ENST00000638861 357 ntBASIC-1.21□□□□□ -2.6
CCL28Q9NRJ3 RNY4P18-201ENST00000391107 89 ntBASIC-1.22□□□□□ -2.6
CCL28Q9NRJ3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.22□□□□□ -2.6
CCL28Q9NRJ3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.22□□□□□ -2.6
CCL28Q9NRJ3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.22□□□□□ -2.6
CCL28Q9NRJ3 RNY1P9-201ENST00000532431 109 ntBASIC-1.22□□□□□ -2.6
CCL28Q9NRJ3 MIR409-201ENST00000362237 79 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 RNU6-219P-201ENST00000364728 107 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 RNU6-557P-201ENST00000516842 110 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 U2.7-201ENST00000619197 100 ntBASIC-1.23□□□□□ -2.61
CCL28Q9NRJ3 MIR3910-1-201ENST00000580936 111 ntBASIC-1.24□□□□□ -2.61
CCL28Q9NRJ3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.25□□□□□ -2.61
CCL28Q9NRJ3 RNU6-497P-201ENST00000365316 104 ntBASIC-1.25□□□□□ -2.61
CCL28Q9NRJ3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.25□□□□□ -2.61
CCL28Q9NRJ3 RNU6-402P-201ENST00000410678 103 ntBASIC-1.25□□□□□ -2.61
CCL28Q9NRJ3 RNU6-303P-201ENST00000517091 106 ntBASIC-1.25□□□□□ -2.61
CCL28Q9NRJ3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.26□□□□□ -2.61
CCL28Q9NRJ3 RNU6-755P-201ENST00000364400 103 ntBASIC-1.27□□□□□ -2.61
CCL28Q9NRJ3 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.27□□□□□ -2.61
CCL28Q9NRJ3 AL353691.2-201ENST00000443795 59 ntBASIC-1.27□□□□□ -2.61
CCL28Q9NRJ3 MIR3115-201ENST00000577915 68 ntBASIC-1.27□□□□□ -2.61
CCL28Q9NRJ3 MIR548BB-201ENST00000626714 66 ntBASIC-1.27□□□□□ -2.61
CCL28Q9NRJ3 SNORD115-22-201ENST00000364456 82 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 SNORD113-1-201ENST00000365321 69 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 SNORA8.1-201ENST00000384250 140 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 MIR29B1-201ENST00000385015 81 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 RNU6-267P-201ENST00000516714 103 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 MIR3675-201ENST00000583661 73 ntBASIC-1.28□□□□□ -2.61
CCL28Q9NRJ3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.29□□□□□ -2.62
CCL28Q9NRJ3 RNU6-686P-201ENST00000364839 107 ntBASIC-1.29□□□□□ -2.62
CCL28Q9NRJ3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms