Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 SNORA2.1-201ENST00000363089 137 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 SNORD114-29-201ENST00000364819 70 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 SNORD45A-201ENST00000384512 84 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 RNU6-1241P-201ENST00000384536 107 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 RNU6-881P-201ENST00000516813 102 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 RNU6-1015P-201ENST00000517121 99 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 AC104408.1-201ENST00000605241 170 ntBASIC0.19□□□□□ -2.38
CDT1Q9H211 MIR593-201ENST00000384856 100 ntBASIC0.18□□□□□ -2.38
CDT1Q9H211 AC021146.9-201ENST00000512503 156 ntBASIC0.18□□□□□ -2.38
CDT1Q9H211 RNU6-656P-201ENST00000516785 107 ntBASIC0.18□□□□□ -2.38
CDT1Q9H211 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.18□□□□□ -2.38
CDT1Q9H211 MIR371B-201ENST00000638082 66 ntBASIC0.18□□□□□ -2.38
CDT1Q9H211 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
CDT1Q9H211 SNORA33.1-201ENST00000364957 130 ntBASIC0.17□□□□□ -2.38
CDT1Q9H211 RNU6-30P-201ENST00000384561 107 ntBASIC0.17□□□□□ -2.38
CDT1Q9H211 RNU6-337P-201ENST00000391243 106 ntBASIC0.17□□□□□ -2.38
CDT1Q9H211 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
CDT1Q9H211 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
CDT1Q9H211 SNORA63.6-201ENST00000364921 119 ntBASIC0.16□□□□□ -2.38
CDT1Q9H211 Y_RNA.565-201ENST00000384719 101 ntBASIC0.16□□□□□ -2.38
CDT1Q9H211 MIR6739-201ENST00000622461 75 ntBASIC0.16□□□□□ -2.38
CDT1Q9H211 MIR145-201ENST00000384967 88 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 RNU6-587P-201ENST00000391282 106 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 RNA5SP163-201ENST00000410304 99 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 RNA5SP25-201ENST00000410815 110 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 RNU6-180P-201ENST00000516697 61 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 MIR4802-201ENST00000581881 80 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 MIR4662A-201ENST00000637499 67 ntBASIC0.15□□□□□ -2.39
CDT1Q9H211 SNORD113.1-201ENST00000363280 73 ntBASIC0.14□□□□□ -2.39
CDT1Q9H211 RNU6-645P-201ENST00000364649 106 ntBASIC0.14□□□□□ -2.39
CDT1Q9H211 RNU6-411P-201ENST00000384451 107 ntBASIC0.14□□□□□ -2.39
CDT1Q9H211 SNORA75.1-201ENST00000391130 148 ntBASIC0.14□□□□□ -2.39
CDT1Q9H211 SNORD114-5-201ENST00000362928 70 ntBASIC0.13□□□□□ -2.39
CDT1Q9H211 RNU6-758P-201ENST00000516292 89 ntBASIC0.13□□□□□ -2.39
CDT1Q9H211 IGLVI-20-201ENST00000519296 130 ntBASIC0.13□□□□□ -2.39
CDT1Q9H211 MIR6507-201ENST00000613630 70 ntBASIC0.13□□□□□ -2.39
CDT1Q9H211 MIR6514-201ENST00000622549 70 ntBASIC0.13□□□□□ -2.39
CDT1Q9H211 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
CDT1Q9H211 SNORD116-24-201ENST00000384549 92 ntBASIC0.12□□□□□ -2.39
CDT1Q9H211 RNU6-540P-201ENST00000384622 101 ntBASIC0.12□□□□□ -2.39
CDT1Q9H211 MIR521-2-201ENST00000384818 87 ntBASIC0.12□□□□□ -2.39
CDT1Q9H211 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
CDT1Q9H211 RNU6-502P-201ENST00000362419 108 ntBASIC0.11□□□□□ -2.39
CDT1Q9H211 MIR154-201ENST00000385243 84 ntBASIC0.11□□□□□ -2.39
CDT1Q9H211 AP000676.1-201ENST00000533307 52 ntBASIC0.11□□□□□ -2.39
CDT1Q9H211 RNA5SP368-201ENST00000364298 116 ntBASIC0.1□□□□□ -2.39
CDT1Q9H211 SNORD114-15-201ENST00000364687 72 ntBASIC0.1□□□□□ -2.39
CDT1Q9H211 CYP3A54P-201ENST00000566950 75 ntBASIC0.1□□□□□ -2.39
CDT1Q9H211 MIR6773-201ENST00000612812 74 ntBASIC0.1□□□□□ -2.39
CDT1Q9H211 Y_RNA.250-201ENST00000364542 110 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 SNORA15B-2-201ENST00000384058 135 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 SNORA15B-1-201ENST00000384334 135 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 Y_RNA.545-201ENST00000384652 105 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 RNU7-165P-201ENST00000458864 60 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 RNU6-634P-201ENST00000459134 106 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 U6.96-201ENST00000636425 70 ntBASIC0.09□□□□□ -2.4
CDT1Q9H211 SNORD115-25-201ENST00000362619 82 ntBASIC0.08□□□□□ -2.4
CDT1Q9H211 SNORD114-31-201ENST00000363219 75 ntBASIC0.08□□□□□ -2.4
CDT1Q9H211 RNU6-1162P-201ENST00000384443 104 ntBASIC0.08□□□□□ -2.4
CDT1Q9H211 CR383656.4-201ENST00000546909 122 ntBASIC0.08□□□□□ -2.4
CDT1Q9H211 MIR8053-201ENST00000613344 75 ntBASIC0.08□□□□□ -2.4
CDT1Q9H211 RNU6-929P-201ENST00000384429 107 ntBASIC0.07□□□□□ -2.4
CDT1Q9H211 MIR655-201ENST00000362159 97 ntBASIC0.06□□□□□ -2.4
CDT1Q9H211 U2.7-201ENST00000619197 100 ntBASIC0.06□□□□□ -2.4
CDT1Q9H211 MIRLET7B-201ENST00000385140 83 ntBASIC0.05□□□□□ -2.4
CDT1Q9H211 MIR1255B2-201ENST00000408618 67 ntBASIC0.05□□□□□ -2.4
CDT1Q9H211 RNU6-1216P-201ENST00000362590 107 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 RNU6-1296P-201ENST00000383879 107 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 MIR9-2-201ENST00000384838 87 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 AC244250.2-201ENST00000418731 148 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 MIR548AG1-201ENST00000579932 66 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
CDT1Q9H211 RNU6-302P-201ENST00000365249 107 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 RNA5SP67-201ENST00000516422 131 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 RNU6-1089P-201ENST00000516473 104 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 uc_338.36-201ENST00000622331 158 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.03□□□□□ -2.4
CDT1Q9H211 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
CDT1Q9H211 RNU6-895P-201ENST00000384125 103 ntBASIC0.02□□□□□ -2.41
CDT1Q9H211 MIR519A2-201ENST00000384990 87 ntBASIC0.02□□□□□ -2.41
CDT1Q9H211 RNU7-159P-201ENST00000459284 62 ntBASIC0.02□□□□□ -2.41
CDT1Q9H211 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
CDT1Q9H211 RNU6-455P-201ENST00000384681 107 ntBASIC0.01□□□□□ -2.41
CDT1Q9H211 MIR548C-201ENST00000384815 97 ntBASIC0.01□□□□□ -2.41
CDT1Q9H211 RNU6-663P-201ENST00000391105 106 ntBASIC0.01□□□□□ -2.41
CDT1Q9H211 SNORD2-201ENST00000459163 69 ntBASIC0.01□□□□□ -2.41
CDT1Q9H211 MIR148A-201ENST00000362215 68 ntBASIC0□□□□□ -2.41
CDT1Q9H211 RNU6-668P-201ENST00000364180 107 ntBASIC0□□□□□ -2.41
CDT1Q9H211 MIR604-201ENST00000384880 94 ntBASIC0□□□□□ -2.41
CDT1Q9H211 RNU7-55P-201ENST00000459426 62 ntBASIC0□□□□□ -2.41
CDT1Q9H211 AP001180.6-201ENST00000584918 159 ntBASIC0□□□□□ -2.41
CDT1Q9H211 RNA5SP331-201ENST00000364986 107 ntBASIC-0.01□□□□□ -2.41
CDT1Q9H211 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.01□□□□□ -2.41
CDT1Q9H211 SNORD30.1-201ENST00000391309 70 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 297.9 ms