Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 AC090617.8-201ENST00000623339 167 ntBASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 SNORA2.1-201ENST00000363089 137 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 RNU6-153P-201ENST00000364422 104 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 RNU6-675P-201ENST00000384236 104 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 RNU6-49P-201ENST00000384256 107 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 SNORA32.3-201ENST00000384772 121 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
ZNF541Q9H0D2 RNU6-844P-201ENST00000517175 102 ntBASIC-0.48□□□□□ -2.49
ZNF541Q9H0D2 U6.96-201ENST00000636425 70 ntBASIC-0.48□□□□□ -2.49
ZNF541Q9H0D2 AC093726.3-201ENST00000637588 150 ntBASIC-0.48□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 YWHAEP3-201ENST00000582767 121 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 MIR5704-201ENST00000584029 77 ntBASIC-0.49□□□□□ -2.49
ZNF541Q9H0D2 SNORD115-23-201ENST00000364461 82 ntBASIC-0.5□□□□□ -2.49
ZNF541Q9H0D2 SNORA33.1-201ENST00000364957 130 ntBASIC-0.5□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.5□□□□□ -2.49
ZNF541Q9H0D2 RNU4-63P-201ENST00000411313 118 ntBASIC-0.5□□□□□ -2.49
ZNF541Q9H0D2 SNORD38.3-201ENST00000516599 73 ntBASIC-0.5□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.51□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.51□□□□□ -2.49
ZNF541Q9H0D2 MT-TQ-201ENST00000387372 72 ntBASIC-0.51□□□□□ -2.49
ZNF541Q9H0D2 RNU6-752P-201ENST00000516376 102 ntBASIC-0.51□□□□□ -2.49
ZNF541Q9H0D2 MIR4432-201ENST00000581823 84 ntBASIC-0.51□□□□□ -2.49
ZNF541Q9H0D2 MIR6851-201ENST00000617060 67 ntBASIC-0.51□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 AC114755.3-201ENST00000481111 251 ntBASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 MIR8068-201ENST00000618032 68 ntBASIC-0.52□□□□□ -2.49
ZNF541Q9H0D2 RNU6-681P-201ENST00000364012 104 ntBASIC-0.53□□□□□ -2.49
ZNF541Q9H0D2 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.53□□□□□ -2.49
ZNF541Q9H0D2 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.54□□□□□ -2.5
ZNF541Q9H0D2 RNU6-557P-201ENST00000516842 110 ntBASIC-0.54□□□□□ -2.5
ZNF541Q9H0D2 snoR1.1-201ENST00000628177 80 ntBASIC-0.54□□□□□ -2.5
ZNF541Q9H0D2 RNU6-478P-201ENST00000363904 110 ntBASIC-0.55□□□□□ -2.5
ZNF541Q9H0D2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.55□□□□□ -2.5
ZNF541Q9H0D2 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.55□□□□□ -2.5
ZNF541Q9H0D2 MIR6854-201ENST00000614935 69 ntBASIC-0.55□□□□□ -2.5
ZNF541Q9H0D2 MIR6739-201ENST00000622461 75 ntBASIC-0.55□□□□□ -2.5
ZNF541Q9H0D2 AC006160.2-201ENST00000637708 154 ntBASIC-0.55□□□□□ -2.5
ZNF541Q9H0D2 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.56□□□□□ -2.5
ZNF541Q9H0D2 MIR521-2-201ENST00000384818 87 ntBASIC-0.56□□□□□ -2.5
ZNF541Q9H0D2 RNY4P30-201ENST00000410216 95 ntBASIC-0.56□□□□□ -2.5
ZNF541Q9H0D2 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.57□□□□□ -2.5
ZNF541Q9H0D2 MIR204-201ENST00000385200 110 ntBASIC-0.57□□□□□ -2.5
ZNF541Q9H0D2 CYP3A54P-201ENST00000566950 75 ntBASIC-0.57□□□□□ -2.5
ZNF541Q9H0D2 RNU6-330P-201ENST00000363015 107 ntBASIC-0.59□□□□□ -2.5
ZNF541Q9H0D2 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.59□□□□□ -2.5
ZNF541Q9H0D2 MIR1255B2-201ENST00000408618 67 ntBASIC-0.59□□□□□ -2.5
ZNF541Q9H0D2 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.6□□□□□ -2.5
ZNF541Q9H0D2 RNU6-686P-201ENST00000364839 107 ntBASIC-0.6□□□□□ -2.5
ZNF541Q9H0D2 RNU6-129P-201ENST00000391022 107 ntBASIC-0.6□□□□□ -2.5
ZNF541Q9H0D2 RNU6-303P-201ENST00000517091 106 ntBASIC-0.6□□□□□ -2.5
ZNF541Q9H0D2 IGLL4P-201ENST00000614590 133 ntBASIC-0.6□□□□□ -2.5
ZNF541Q9H0D2 RNY1P1-201ENST00000364372 112 ntBASIC-0.61□□□□□ -2.51
ZNF541Q9H0D2 AC074348.1-201ENST00000426503 132 ntBASIC-0.61□□□□□ -2.51
ZNF541Q9H0D2 AL353803.5-201ENST00000599815 141 ntBASIC-0.61□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.62□□□□□ -2.51
ZNF541Q9H0D2 MIR518B-201ENST00000385127 83 ntBASIC-0.62□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.62□□□□□ -2.51
ZNF541Q9H0D2 MIR4436A-201ENST00000585278 85 ntBASIC-0.62□□□□□ -2.51
ZNF541Q9H0D2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 RNU6-979P-201ENST00000383896 107 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 SNORA3B-201ENST00000391305 131 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 SNORD22.1-201ENST00000516331 125 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 RNU6-656P-201ENST00000516785 107 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 MIR4464-201ENST00000580818 92 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 MIR5588-201ENST00000581890 63 ntBASIC-0.63□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 MIR601-201ENST00000385256 79 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 MIR3675-201ENST00000583661 73 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 MIR198-201ENST00000637333 62 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 RNU6-721P-201ENST00000410155 105 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 RNA5SP470-201ENST00000516463 106 ntBASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.64□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 SNORA8.1-201ENST00000384250 140 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.65□□□□□ -2.51
ZNF541Q9H0D2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms