Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MIR519C-201ENST00000385053 87 ntBASIC-1.16□□□□□ -2.6
VMP1Q96GC9 AL500527.2-201ENST00000454105 95 ntBASIC-1.16□□□□□ -2.6
VMP1Q96GC9 RNU6-589P-201ENST00000516485 107 ntBASIC-1.16□□□□□ -2.6
VMP1Q96GC9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.16□□□□□ -2.6
VMP1Q96GC9 RNU6-834P-201ENST00000362367 110 ntBASIC-1.17□□□□□ -2.6
VMP1Q96GC9 RNU6-340P-201ENST00000364005 107 ntBASIC-1.17□□□□□ -2.6
VMP1Q96GC9 RNU6-681P-201ENST00000364012 104 ntBASIC-1.17□□□□□ -2.6
VMP1Q96GC9 SNORD115-27-201ENST00000364430 82 ntBASIC-1.17□□□□□ -2.6
VMP1Q96GC9 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.17□□□□□ -2.6
VMP1Q96GC9 RNU6-158P-201ENST00000517104 100 ntBASIC-1.17□□□□□ -2.6
VMP1Q96GC9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
VMP1Q96GC9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.17□□□□□ -2.6
VMP1Q96GC9 RNU6-924P-201ENST00000362926 108 ntBASIC-1.18□□□□□ -2.6
VMP1Q96GC9 SNORD77.2-201ENST00000391045 68 ntBASIC-1.18□□□□□ -2.6
VMP1Q96GC9 RNU7-154P-201ENST00000516194 62 ntBASIC-1.18□□□□□ -2.6
VMP1Q96GC9 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.19□□□□□ -2.6
VMP1Q96GC9 MTATP8P2-201ENST00000435212 202 ntBASIC-1.19□□□□□ -2.6
VMP1Q96GC9 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.19□□□□□ -2.6
VMP1Q96GC9 SNORD57-201ENST00000448188 72 ntBASIC-1.19□□□□□ -2.6
VMP1Q96GC9 AC140658.3-201ENST00000567603 271 ntBASIC-1.19□□□□□ -2.6
VMP1Q96GC9 MIR382-201ENST00000637119 76 ntBASIC-1.19□□□□□ -2.6
VMP1Q96GC9 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.2□□□□□ -2.6
VMP1Q96GC9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
VMP1Q96GC9 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.2□□□□□ -2.6
VMP1Q96GC9 RNY1P9-201ENST00000532431 109 ntBASIC-1.2□□□□□ -2.6
VMP1Q96GC9 uc_338.19-201ENST00000616808 99 ntBASIC-1.21□□□□□ -2.6
VMP1Q96GC9 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 RNU6-24P-201ENST00000384440 107 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 MIR519A2-201ENST00000384990 87 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 RNU6-518P-201ENST00000516056 96 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 MIR378F-201ENST00000578143 78 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 MIR2052-201ENST00000636055 55 ntBASIC-1.22□□□□□ -2.6
VMP1Q96GC9 RNU6-633P-201ENST00000362612 103 ntBASIC-1.23□□□□□ -2.61
VMP1Q96GC9 SNORD115-37-201ENST00000363768 82 ntBASIC-1.23□□□□□ -2.61
VMP1Q96GC9 RNU6-22P-201ENST00000384355 107 ntBASIC-1.23□□□□□ -2.61
VMP1Q96GC9 AL035461.1-201ENST00000421490 332 ntBASIC-1.23□□□□□ -2.61
VMP1Q96GC9 MT-TR-201ENST00000387439 65 ntBASIC-1.24□□□□□ -2.61
VMP1Q96GC9 AL021921.1-201ENST00000442774 93 ntBASIC-1.24□□□□□ -2.61
VMP1Q96GC9 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.24□□□□□ -2.61
VMP1Q96GC9 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.24□□□□□ -2.61
VMP1Q96GC9 MIR4499-201ENST00000584834 69 ntBASIC-1.24□□□□□ -2.61
VMP1Q96GC9 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.25□□□□□ -2.61
VMP1Q96GC9 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.25□□□□□ -2.61
VMP1Q96GC9 AL031737.1-201ENST00000450125 223 ntBASIC-1.25□□□□□ -2.61
VMP1Q96GC9 SCARNA18B-201ENST00000458806 135 ntBASIC-1.25□□□□□ -2.61
VMP1Q96GC9 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
VMP1Q96GC9 MIR4668-201ENST00000582284 70 ntBASIC-1.25□□□□□ -2.61
VMP1Q96GC9 MIR548M-201ENST00000408260 86 ntBASIC-1.26□□□□□ -2.61
VMP1Q96GC9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.27□□□□□ -2.61
VMP1Q96GC9 SNORA26.4-201ENST00000391188 123 ntBASIC-1.27□□□□□ -2.61
VMP1Q96GC9 SNORD115-33-201ENST00000363723 82 ntBASIC-1.28□□□□□ -2.61
VMP1Q96GC9 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.28□□□□□ -2.61
VMP1Q96GC9 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.28□□□□□ -2.61
VMP1Q96GC9 RNU6-479P-201ENST00000516348 105 ntBASIC-1.28□□□□□ -2.61
VMP1Q96GC9 RNU6-656P-201ENST00000516785 107 ntBASIC-1.28□□□□□ -2.61
VMP1Q96GC9 MIR4320-201ENST00000636981 65 ntBASIC-1.28□□□□□ -2.61
VMP1Q96GC9 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.29□□□□□ -2.62
VMP1Q96GC9 AC093729.1-201ENST00000513074 128 ntBASIC-1.29□□□□□ -2.62
VMP1Q96GC9 MIR450A1-201ENST00000362262 91 ntBASIC-1.3□□□□□ -2.62
VMP1Q96GC9 RNU6-624P-201ENST00000363411 107 ntBASIC-1.3□□□□□ -2.62
VMP1Q96GC9 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.3□□□□□ -2.62
VMP1Q96GC9 RNU6-313P-201ENST00000516317 112 ntBASIC-1.3□□□□□ -2.62
VMP1Q96GC9 SNORD63.1-201ENST00000516178 80 ntBASIC-1.31□□□□□ -2.62
VMP1Q96GC9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.31□□□□□ -2.62
VMP1Q96GC9 SNORD116-22-201ENST00000384430 92 ntBASIC-1.32□□□□□ -2.62
VMP1Q96GC9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.33□□□□□ -2.62
VMP1Q96GC9 SNORA40.13-201ENST00000516379 120 ntBASIC-1.33□□□□□ -2.62
VMP1Q96GC9 MIR3165-201ENST00000579874 75 ntBASIC-1.33□□□□□ -2.62
VMP1Q96GC9 AP001318.4-201ENST00000616637 121 ntBASIC-1.33□□□□□ -2.62
VMP1Q96GC9 U2.7-201ENST00000619197 100 ntBASIC-1.33□□□□□ -2.62
VMP1Q96GC9 MIR409-201ENST00000362237 79 ntBASIC-1.34□□□□□ -2.62
VMP1Q96GC9 RNU6-645P-201ENST00000364649 106 ntBASIC-1.34□□□□□ -2.62
VMP1Q96GC9 RNU6-807P-201ENST00000516805 107 ntBASIC-1.34□□□□□ -2.62
VMP1Q96GC9 MIR4306-201ENST00000583390 91 ntBASIC-1.34□□□□□ -2.62
VMP1Q96GC9 MALAT1.1-201ENST00000618249 95 ntBASIC-1.34□□□□□ -2.62
VMP1Q96GC9 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.35□□□□□ -2.63
VMP1Q96GC9 RNU6-219P-201ENST00000364728 107 ntBASIC-1.35□□□□□ -2.63
VMP1Q96GC9 RNY4P18-201ENST00000391107 89 ntBASIC-1.35□□□□□ -2.63
VMP1Q96GC9 RNU6-557P-201ENST00000516842 110 ntBASIC-1.35□□□□□ -2.63
VMP1Q96GC9 SNORD115-22-201ENST00000364456 82 ntBASIC-1.36□□□□□ -2.63
VMP1Q96GC9 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.36□□□□□ -2.63
VMP1Q96GC9 RNA5SP266-201ENST00000410273 108 ntBASIC-1.36□□□□□ -2.63
VMP1Q96GC9 AC132825.6-201ENST00000638861 357 ntBASIC-1.36□□□□□ -2.63
VMP1Q96GC9 RNU6-497P-201ENST00000365316 104 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 MIR29B1-201ENST00000385015 81 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 RNU6-402P-201ENST00000410678 103 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 RNU2-51P-201ENST00000410708 197 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 AL353691.2-201ENST00000443795 59 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 RNU6-303P-201ENST00000517091 106 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.37□□□□□ -2.63
VMP1Q96GC9 RNU6-732P-201ENST00000516033 103 ntBASIC-1.38□□□□□ -2.63
VMP1Q96GC9 RNA5SP461-201ENST00000516451 104 ntBASIC-1.38□□□□□ -2.63
VMP1Q96GC9 MIR548AG1-201ENST00000579932 66 ntBASIC-1.38□□□□□ -2.63
VMP1Q96GC9 MIR3910-1-201ENST00000580936 111 ntBASIC-1.38□□□□□ -2.63
VMP1Q96GC9 MIR3675-201ENST00000583661 73 ntBASIC-1.38□□□□□ -2.63
VMP1Q96GC9 MIR548BB-201ENST00000626714 66 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms