Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNU7-151P-201ENST00000516930 53 ntBASIC1.47□□□□□ -2.17
NKX2-3Q8TAU0 RNA5SP404-201ENST00000517118 132 ntBASIC1.47□□□□□ -2.17
NKX2-3Q8TAU0 RNU1-29P-201ENST00000606574 126 ntBASIC1.47□□□□□ -2.17
NKX2-3Q8TAU0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
NKX2-3Q8TAU0 RNU6-598P-201ENST00000364017 105 ntBASIC1.46□□□□□ -2.18
NKX2-3Q8TAU0 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
NKX2-3Q8TAU0 SNORA49-201ENST00000386157 136 ntBASIC1.46□□□□□ -2.18
NKX2-3Q8TAU0 RNU6-986P-201ENST00000363133 102 ntBASIC1.45□□□□□ -2.18
NKX2-3Q8TAU0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.45□□□□□ -2.18
NKX2-3Q8TAU0 AL451105.1-201ENST00000450005 189 ntBASIC1.45□□□□□ -2.18
NKX2-3Q8TAU0 AC011195.1-201ENST00000578177 177 ntBASIC1.45□□□□□ -2.18
NKX2-3Q8TAU0 RN7SL793P-201ENST00000583259 296 ntBASIC1.45□□□□□ -2.18
NKX2-3Q8TAU0 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 RNU6-828P-201ENST00000364876 107 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 RNY1P8-201ENST00000383970 114 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 MIR329-2-201ENST00000385029 84 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 MIR579-201ENST00000385221 98 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 MIR4752-201ENST00000579672 72 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 U7.6-201ENST00000610841 64 ntBASIC1.44□□□□□ -2.18
NKX2-3Q8TAU0 RNU6-502P-201ENST00000362419 108 ntBASIC1.43□□□□□ -2.18
NKX2-3Q8TAU0 SNORD99-201ENST00000408612 74 ntBASIC1.43□□□□□ -2.18
NKX2-3Q8TAU0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
NKX2-3Q8TAU0 MIR548AA1-201ENST00000384971 97 ntBASIC1.42□□□□□ -2.18
NKX2-3Q8TAU0 MIR125B1-201ENST00000385236 88 ntBASIC1.42□□□□□ -2.18
NKX2-3Q8TAU0 MIR6767-201ENST00000637302 66 ntBASIC1.42□□□□□ -2.18
NKX2-3Q8TAU0 RNU6-1204P-201ENST00000363948 107 ntBASIC1.41□□□□□ -2.18
NKX2-3Q8TAU0 AC087343.1-201ENST00000477341 475 ntBASIC1.41□□□□□ -2.18
NKX2-3Q8TAU0 RNA5SP476-201ENST00000516613 103 ntBASIC1.41□□□□□ -2.18
NKX2-3Q8TAU0 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
NKX2-3Q8TAU0 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-175P-201ENST00000516896 107 ntBASIC1.4□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-995P-201ENST00000391244 107 ntBASIC1.39□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-782P-201ENST00000516852 104 ntBASIC1.39□□□□□ -2.19
NKX2-3Q8TAU0 MIR5000-201ENST00000577717 103 ntBASIC1.39□□□□□ -2.19
NKX2-3Q8TAU0 U2.18-201ENST00000622185 84 ntBASIC1.39□□□□□ -2.19
NKX2-3Q8TAU0 MIR216A-201ENST00000385063 110 ntBASIC1.38□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
NKX2-3Q8TAU0 RNU7-188P-201ENST00000517063 64 ntBASIC1.38□□□□□ -2.19
NKX2-3Q8TAU0 SNORD45.2-201ENST00000363552 72 ntBASIC1.37□□□□□ -2.19
NKX2-3Q8TAU0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.37□□□□□ -2.19
NKX2-3Q8TAU0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-1262P-201ENST00000516217 96 ntBASIC1.36□□□□□ -2.19
NKX2-3Q8TAU0 AL353803.5-201ENST00000599815 141 ntBASIC1.36□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-945P-201ENST00000383947 107 ntBASIC1.35□□□□□ -2.19
NKX2-3Q8TAU0 RNA5SP436-201ENST00000516020 115 ntBASIC1.35□□□□□ -2.19
NKX2-3Q8TAU0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.35□□□□□ -2.19
NKX2-3Q8TAU0 RNA5SP457-201ENST00000363657 124 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 SNORA2A-201ENST00000383885 135 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 AC098934.3-201ENST00000430450 190 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 AC069271.1-201ENST00000445577 156 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-848P-201ENST00000515948 107 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-617P-201ENST00000516147 107 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-473P-201ENST00000516164 107 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 U6.103-201ENST00000637085 61 ntBASIC1.34□□□□□ -2.19
NKX2-3Q8TAU0 SNORD115-23-201ENST00000364461 82 ntBASIC1.33□□□□□ -2.2
NKX2-3Q8TAU0 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
NKX2-3Q8TAU0 AC211469.2-201ENST00000605461 205 ntBASIC1.33□□□□□ -2.2
NKX2-3Q8TAU0 RNU6-822P-201ENST00000362707 106 ntBASIC1.32□□□□□ -2.2
NKX2-3Q8TAU0 RNA5SP62-201ENST00000363457 110 ntBASIC1.32□□□□□ -2.2
NKX2-3Q8TAU0 RNA5SP517-201ENST00000364724 117 ntBASIC1.31□□□□□ -2.2
NKX2-3Q8TAU0 RNU6-742P-201ENST00000365289 107 ntBASIC1.31□□□□□ -2.2
NKX2-3Q8TAU0 RNA5SP222-201ENST00000411039 105 ntBASIC1.31□□□□□ -2.2
NKX2-3Q8TAU0 AC108676.2-201ENST00000605225 163 ntBASIC1.31□□□□□ -2.2
NKX2-3Q8TAU0 AL627230.5-201ENST00000619807 58 ntBASIC1.31□□□□□ -2.2
NKX2-3Q8TAU0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.3□□□□□ -2.2
NKX2-3Q8TAU0 MIR4677-201ENST00000584153 80 ntBASIC1.3□□□□□ -2.2
NKX2-3Q8TAU0 SNORD114-21-201ENST00000606412 72 ntBASIC1.3□□□□□ -2.2
NKX2-3Q8TAU0 RNU6-229P-201ENST00000516614 102 ntBASIC1.29□□□□□ -2.2
NKX2-3Q8TAU0 MIR4661-201ENST00000582720 75 ntBASIC1.29□□□□□ -2.2
NKX2-3Q8TAU0 SNORD118-201ENST00000363593 134 ntBASIC1.28□□□□□ -2.2
NKX2-3Q8TAU0 SNORD57-201ENST00000448188 72 ntBASIC1.28□□□□□ -2.2
NKX2-3Q8TAU0 AL353765.1-201ENST00000605514 183 ntBASIC1.28□□□□□ -2.2
NKX2-3Q8TAU0 Y_RNA.139-201ENST00000363464 102 ntBASIC1.27□□□□□ -2.21
NKX2-3Q8TAU0 RNU6-1267P-201ENST00000410747 107 ntBASIC1.27□□□□□ -2.21
NKX2-3Q8TAU0 MIR193B-201ENST00000384907 83 ntBASIC1.26□□□□□ -2.21
NKX2-3Q8TAU0 RNU6-721P-201ENST00000410155 105 ntBASIC1.26□□□□□ -2.21
NKX2-3Q8TAU0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.26□□□□□ -2.21
NKX2-3Q8TAU0 AC084368.1-201ENST00000620935 65 ntBASIC1.26□□□□□ -2.21
NKX2-3Q8TAU0 CYP3A137P-201ENST00000562436 69 ntBASIC1.25□□□□□ -2.21
NKX2-3Q8TAU0 MIR1273G-201ENST00000577677 100 ntBASIC1.25□□□□□ -2.21
NKX2-3Q8TAU0 MIR6857-201ENST00000613267 93 ntBASIC1.25□□□□□ -2.21
NKX2-3Q8TAU0 MIR6086-201ENST00000638065 55 ntBASIC1.25□□□□□ -2.21
NKX2-3Q8TAU0 MIR373-201ENST00000362273 69 ntBASIC1.24□□□□□ -2.21
NKX2-3Q8TAU0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.24□□□□□ -2.21
NKX2-3Q8TAU0 MIR29B1-201ENST00000385015 81 ntBASIC1.24□□□□□ -2.21
NKX2-3Q8TAU0 MIR4432-201ENST00000581823 84 ntBASIC1.24□□□□□ -2.21
NKX2-3Q8TAU0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 MIR140-201ENST00000385282 100 ntBASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 MIR501-201ENST00000390204 84 ntBASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 SNORA40.8-201ENST00000411034 126 ntBASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.23□□□□□ -2.21
NKX2-3Q8TAU0 MIR106A-201ENST00000384870 81 ntBASIC1.22□□□□□ -2.21
NKX2-3Q8TAU0 AL590095.2-201ENST00000604136 117 ntBASIC1.22□□□□□ -2.21
NKX2-3Q8TAU0 SNORA25.18-201ENST00000607153 114 ntBASIC1.22□□□□□ -2.21
NKX2-3Q8TAU0 RN7SL660P-201ENST00000614852 299 ntBASIC1.22□□□□□ -2.21
NKX2-3Q8TAU0 RNU6-59P-201ENST00000384787 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms