Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 MIR6854-201ENST00000614935 69 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 U2.7-201ENST00000619197 100 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 AC093726.3-201ENST00000637588 150 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 RNY1P1-201ENST00000364372 112 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 MIR329-2-201ENST00000385029 84 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 SNORD22.1-201ENST00000516331 125 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 MIR5582-201ENST00000579697 68 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 MIR5588-201ENST00000581890 63 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 AL353803.5-201ENST00000599815 141 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 IGLL4P-201ENST00000614590 133 ntBASIC-0.23□□□□□ -2.45
CKAP4Q07065 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 RNU6-686P-201ENST00000364839 107 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 RNU6-294P-201ENST00000364999 102 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 MIR147A-201ENST00000385079 72 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 RNU6-129P-201ENST00000391022 107 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 SNORD75.1-201ENST00000408373 60 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 MIR1255B2-201ENST00000408618 67 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 AL445193.1-201ENST00000441183 141 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 AL500527.2-201ENST00000454105 95 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 AP002795.1-201ENST00000534879 84 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.24□□□□□ -2.45
CKAP4Q07065 SNORD115-22-201ENST00000364456 82 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 SNORD74.6-201ENST00000364796 70 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 SCARNA18B-201ENST00000458806 135 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 RNU7-171P-201ENST00000459581 62 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.25□□□□□ -2.45
CKAP4Q07065 RNU6-982P-201ENST00000516216 102 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 RNU7-174P-201ENST00000516248 59 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 RNU6-303P-201ENST00000517091 106 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 MIR548AZ-201ENST00000616567 95 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 U4.4-201ENST00000620626 117 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 MIR664A-201ENST00000626086 82 ntBASIC-0.25□□□□□ -2.45
CKAP4Q07065 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.25□□□□□ -2.45
CKAP4Q07065 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR489-201ENST00000384923 84 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR450A2-201ENST00000385022 100 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR518B-201ENST00000385127 83 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 SNORD19-201ENST00000391191 68 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 SNORA3B-201ENST00000391305 131 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR1197-201ENST00000408818 88 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 RNU7-154P-201ENST00000516194 62 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 RNA5SP395-201ENST00000516567 118 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR3179-1-201ENST00000578940 84 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR3179-2-201ENST00000579107 84 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR3179-3-201ENST00000579566 84 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 MIR3179-4-201ENST00000617599 84 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 U6.96-201ENST00000636425 70 ntBASIC-0.26□□□□□ -2.45
CKAP4Q07065 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CKAP4Q07065 RNU6-645P-201ENST00000364649 106 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 SNORD116-24-201ENST00000384549 92 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 SNORD64-201ENST00000386683 67 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 RNU6-587P-201ENST00000391282 106 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 SNORA13-201ENST00000458790 133 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 RNU6-523P-201ENST00000516304 54 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 MIR4645-201ENST00000583158 77 ntBASIC-0.27□□□□□ -2.45
CKAP4Q07065 RNU6-315P-201ENST00000362666 107 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 AP000533.3-201ENST00000447704 118 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 RNU7-134P-201ENST00000458997 64 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 RNA5SP470-201ENST00000516463 106 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 RNA5SP170-201ENST00000517150 101 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 MIR4666B-201ENST00000578142 81 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 MIR4712-201ENST00000583750 82 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 MIR382-201ENST00000637119 76 ntBASIC-0.28□□□□□ -2.45
CKAP4Q07065 RNA5SP26-201ENST00000362406 119 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 SNORD114-28-201ENST00000363610 72 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 SNORA62.4-201ENST00000365504 151 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 RNU6-901P-201ENST00000384593 106 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 MIR124-2-201ENST00000385081 109 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 MIR517B-201ENST00000385102 67 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 RNU6-604P-201ENST00000390917 100 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 AC022137.1-201ENST00000483735 151 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 SNORD63.1-201ENST00000516178 80 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 MIR3675-201ENST00000583661 73 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 AC062037.1-201ENST00000605302 128 ntBASIC-0.29□□□□□ -2.46
CKAP4Q07065 RNA5SP457-201ENST00000363657 124 ntBASIC-0.3□□□□□ -2.46
CKAP4Q07065 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.3□□□□□ -2.46
CKAP4Q07065 SNORA8.1-201ENST00000384250 140 ntBASIC-0.3□□□□□ -2.46
CKAP4Q07065 RNU6-518P-201ENST00000516056 96 ntBASIC-0.3□□□□□ -2.46
CKAP4Q07065 AC108676.2-201ENST00000605225 163 ntBASIC-0.3□□□□□ -2.46
CKAP4Q07065 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.3□□□□□ -2.46
CKAP4Q07065 MIR1297-201ENST00000637311 77 ntBASIC-0.3□□□□□ -2.46
CKAP4Q07065 MIR494-201ENST00000349529 81 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms