Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.45□□□□□ -2.48
CDH11P55287 MIR5588-201ENST00000581890 63 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 U6.96-201ENST00000636425 70 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 RNY1P1-201ENST00000364372 112 ntBASIC-0.46□□□□□ -2.48
CDH11P55287 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
CDH11P55287 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.46□□□□□ -2.48
CDH11P55287 RNU6-129P-201ENST00000391022 107 ntBASIC-0.46□□□□□ -2.48
CDH11P55287 AC074348.1-201ENST00000426503 132 ntBASIC-0.46□□□□□ -2.48
CDH11P55287 MIR101-1-201ENST00000362265 75 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 RNA5SP368-201ENST00000364298 116 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 MIR521-2-201ENST00000384818 87 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 RNA5SP476-201ENST00000516613 103 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 RNU6-303P-201ENST00000517091 106 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 MIR5582-201ENST00000579697 68 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 IGLL4P-201ENST00000614590 133 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 MIR6851-201ENST00000617060 67 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 AC093726.3-201ENST00000637588 150 ntBASIC-0.47□□□□□ -2.48
CDH11P55287 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
CDH11P55287 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.48□□□□□ -2.49
CDH11P55287 RNU6-901P-201ENST00000384593 106 ntBASIC-0.48□□□□□ -2.49
CDH11P55287 Z95118.1-201ENST00000421372 247 ntBASIC-0.48□□□□□ -2.49
CDH11P55287 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
CDH11P55287 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.48□□□□□ -2.49
CDH11P55287 RNU6-758P-201ENST00000516292 89 ntBASIC-0.48□□□□□ -2.49
CDH11P55287 RNU6-294P-201ENST00000364999 102 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 RNU7-171P-201ENST00000459581 62 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 AC114755.3-201ENST00000481111 251 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 MIR4432-201ENST00000581823 84 ntBASIC-0.49□□□□□ -2.49
CDH11P55287 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.5□□□□□ -2.49
CDH11P55287 RNU6-330P-201ENST00000363015 107 ntBASIC-0.5□□□□□ -2.49
CDH11P55287 MIR604-201ENST00000384880 94 ntBASIC-0.5□□□□□ -2.49
CDH11P55287 AL445193.1-201ENST00000441183 141 ntBASIC-0.5□□□□□ -2.49
CDH11P55287 MIR5704-201ENST00000584029 77 ntBASIC-0.5□□□□□ -2.49
CDH11P55287 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
CDH11P55287 MIR196A2-201ENST00000385189 110 ntBASIC-0.51□□□□□ -2.49
CDH11P55287 RNA5SP451-201ENST00000410588 110 ntBASIC-0.52□□□□□ -2.49
CDH11P55287 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
CDH11P55287 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
CDH11P55287 CYP3A54P-201ENST00000566950 75 ntBASIC-0.52□□□□□ -2.49
CDH11P55287 MIR8068-201ENST00000618032 68 ntBASIC-0.52□□□□□ -2.49
CDH11P55287 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.53□□□□□ -2.49
CDH11P55287 MIR450A2-201ENST00000385022 100 ntBASIC-0.53□□□□□ -2.49
CDH11P55287 MIR6854-201ENST00000614935 69 ntBASIC-0.53□□□□□ -2.49
CDH11P55287 RNU6-315P-201ENST00000362666 107 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 AC022137.1-201ENST00000483735 151 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 RNU6-656P-201ENST00000516785 107 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 MIR3675-201ENST00000583661 73 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 MIR548AZ-201ENST00000616567 95 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 snoR1.1-201ENST00000628177 80 ntBASIC-0.54□□□□□ -2.5
CDH11P55287 RNA5SP25-201ENST00000410815 110 ntBASIC-0.55□□□□□ -2.5
CDH11P55287 MIR494-201ENST00000349529 81 ntBASIC-0.56□□□□□ -2.5
CDH11P55287 MIR1255B2-201ENST00000408618 67 ntBASIC-0.56□□□□□ -2.5
CDH11P55287 AC108676.2-201ENST00000605225 163 ntBASIC-0.56□□□□□ -2.5
CDH11P55287 MIR1297-201ENST00000637311 77 ntBASIC-0.56□□□□□ -2.5
CDH11P55287 SNORA8.1-201ENST00000384250 140 ntBASIC-0.57□□□□□ -2.5
CDH11P55287 MIR224-201ENST00000384889 81 ntBASIC-0.57□□□□□ -2.5
CDH11P55287 RNA5SP470-201ENST00000516463 106 ntBASIC-0.57□□□□□ -2.5
CDH11P55287 MIR4464-201ENST00000580818 92 ntBASIC-0.57□□□□□ -2.5
CDH11P55287 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.58□□□□□ -2.5
CDH11P55287 RNA5SP170-201ENST00000517150 101 ntBASIC-0.58□□□□□ -2.5
CDH11P55287 AL353803.5-201ENST00000599815 141 ntBASIC-0.58□□□□□ -2.5
CDH11P55287 SNORA62.4-201ENST00000365504 151 ntBASIC-0.59□□□□□ -2.5
CDH11P55287 HAR1A.1-201ENST00000459583 118 ntBASIC-0.59□□□□□ -2.5
CDH11P55287 MIR1245B-201ENST00000636115 69 ntBASIC-0.59□□□□□ -2.5
CDH11P55287 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 RNU6-820P-201ENST00000384273 107 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 SNORA13-201ENST00000458790 133 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 RNU6-807P-201ENST00000516805 107 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 MIR4666B-201ENST00000578142 81 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 MIR4712-201ENST00000583750 82 ntBASIC-0.6□□□□□ -2.51
CDH11P55287 SNORD114-14-201ENST00000362723 75 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 RNU6-645P-201ENST00000364649 106 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 SNORD74.6-201ENST00000364796 70 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 RNU6-787P-201ENST00000384032 107 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 MIR518B-201ENST00000385127 83 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 RNU6-881P-201ENST00000516813 102 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 MIR4484-201ENST00000582855 83 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 AC062037.1-201ENST00000605302 128 ntBASIC-0.61□□□□□ -2.51
CDH11P55287 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 RNU6-30P-201ENST00000384561 107 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 MIR519A2-201ENST00000384990 87 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 RNU6-380P-201ENST00000410207 107 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 RNU7-154P-201ENST00000516194 62 ntBASIC-0.62□□□□□ -2.51
CDH11P55287 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.63□□□□□ -2.51
CDH11P55287 SNORA3B-201ENST00000391305 131 ntBASIC-0.63□□□□□ -2.51
CDH11P55287 RNU4-63P-201ENST00000411313 118 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 298.3 ms