Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR1255B2-201ENST00000408618 67 ntBASIC0.73□□□□□ -2.29
EPHA4P54764 MIR499B-201ENST00000636498 73 ntBASIC0.73□□□□□ -2.29
EPHA4P54764 MIR6773-201ENST00000612812 74 ntBASIC0.72□□□□□ -2.29
EPHA4P54764 U4.4-201ENST00000620626 117 ntBASIC0.72□□□□□ -2.29
EPHA4P54764 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
EPHA4P54764 SNORD60.1-201ENST00000362451 73 ntBASIC0.71□□□□□ -2.3
EPHA4P54764 RNA5SP470-201ENST00000516463 106 ntBASIC0.71□□□□□ -2.3
EPHA4P54764 RNU6-175P-201ENST00000516896 107 ntBASIC0.71□□□□□ -2.3
EPHA4P54764 SNORD115-25-201ENST00000362619 82 ntBASIC0.7□□□□□ -2.3
EPHA4P54764 MIR876-201ENST00000401147 81 ntBASIC0.7□□□□□ -2.3
EPHA4P54764 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
EPHA4P54764 RNU6-1079P-201ENST00000362861 110 ntBASIC0.69□□□□□ -2.3
EPHA4P54764 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
EPHA4P54764 AC079150.2-201ENST00000443733 78 ntBASIC0.69□□□□□ -2.3
EPHA4P54764 MIR3938-201ENST00000582157 103 ntBASIC0.69□□□□□ -2.3
EPHA4P54764 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
EPHA4P54764 SCARNA11.2-201ENST00000517183 154 ntBASIC0.68□□□□□ -2.3
EPHA4P54764 AC090617.8-201ENST00000623339 167 ntBASIC0.68□□□□□ -2.3
EPHA4P54764 SNORA49-201ENST00000386157 136 ntBASIC0.67□□□□□ -2.3
EPHA4P54764 SNORA68.3-201ENST00000515906 83 ntBASIC0.67□□□□□ -2.3
EPHA4P54764 RNA5SP436-201ENST00000516020 115 ntBASIC0.67□□□□□ -2.3
EPHA4P54764 RNU7-154P-201ENST00000516194 62 ntBASIC0.67□□□□□ -2.3
EPHA4P54764 MIR3925-201ENST00000584674 77 ntBASIC0.67□□□□□ -2.3
EPHA4P54764 RNU6-614P-201ENST00000384369 107 ntBASIC0.66□□□□□ -2.3
EPHA4P54764 RN7SL660P-201ENST00000614852 299 ntBASIC0.66□□□□□ -2.3
EPHA4P54764 U6.59-201ENST00000615686 107 ntBASIC0.66□□□□□ -2.3
EPHA4P54764 Y_RNA.325-201ENST00000365171 122 ntBASIC0.65□□□□□ -2.31
EPHA4P54764 MIRLET7B-201ENST00000385140 83 ntBASIC0.65□□□□□ -2.31
EPHA4P54764 RNU6-337P-201ENST00000391243 106 ntBASIC0.65□□□□□ -2.31
EPHA4P54764 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
EPHA4P54764 MIRLET7D-201ENST00000362263 87 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 Y_RNA.74-201ENST00000362911 99 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 MIR106A-201ENST00000384870 81 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 MIR519A2-201ENST00000384990 87 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.64□□□□□ -2.31
EPHA4P54764 RNU6-782P-201ENST00000516852 104 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
EPHA4P54764 MIR429-201ENST00000362106 83 ntBASIC0.63□□□□□ -2.31
EPHA4P54764 MIR527-201ENST00000385244 85 ntBASIC0.63□□□□□ -2.31
EPHA4P54764 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
EPHA4P54764 MIR103A1-201ENST00000362165 78 ntBASIC0.62□□□□□ -2.31
EPHA4P54764 RNU6-502P-201ENST00000362419 108 ntBASIC0.62□□□□□ -2.31
EPHA4P54764 RNA5SP98-201ENST00000363158 137 ntBASIC0.62□□□□□ -2.31
EPHA4P54764 AP000676.1-201ENST00000533307 52 ntBASIC0.62□□□□□ -2.31
EPHA4P54764 RNA5SP62-201ENST00000363457 110 ntBASIC0.61□□□□□ -2.31
EPHA4P54764 RNU6-987P-201ENST00000384759 104 ntBASIC0.61□□□□□ -2.31
EPHA4P54764 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.61□□□□□ -2.31
EPHA4P54764 AC108740.1-201ENST00000498629 225 ntBASIC0.61□□□□□ -2.31
EPHA4P54764 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
EPHA4P54764 MIR216A-201ENST00000385063 110 ntBASIC0.6□□□□□ -2.31
EPHA4P54764 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.6□□□□□ -2.31
EPHA4P54764 snoR1.1-201ENST00000628177 80 ntBASIC0.6□□□□□ -2.31
EPHA4P54764 AC090625.1-201ENST00000357130 210 ntBASIC0.59□□□□□ -2.31
EPHA4P54764 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
EPHA4P54764 RNU6-829P-201ENST00000363700 112 ntBASIC0.59□□□□□ -2.31
EPHA4P54764 RNU6-127P-201ENST00000390897 107 ntBASIC0.59□□□□□ -2.31
EPHA4P54764 RNU6-1246P-201ENST00000391064 107 ntBASIC0.59□□□□□ -2.31
EPHA4P54764 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.59□□□□□ -2.31
EPHA4P54764 RNU4-37P-201ENST00000410214 84 ntBASIC0.58□□□□□ -2.32
EPHA4P54764 RNU7-119P-201ENST00000459279 63 ntBASIC0.57□□□□□ -2.32
EPHA4P54764 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.57□□□□□ -2.32
EPHA4P54764 RNA5SP325-201ENST00000363756 130 ntBASIC0.56□□□□□ -2.32
EPHA4P54764 RNU6-815P-201ENST00000384080 113 ntBASIC0.56□□□□□ -2.32
EPHA4P54764 SNORD116-16-201ENST00000384533 92 ntBASIC0.56□□□□□ -2.32
EPHA4P54764 RNU6-520P-201ENST00000384717 104 ntBASIC0.56□□□□□ -2.32
EPHA4P54764 MIR892B-201ENST00000401279 77 ntBASIC0.56□□□□□ -2.32
EPHA4P54764 SNORA41B-201ENST00000384785 128 ntBASIC0.55□□□□□ -2.32
EPHA4P54764 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
EPHA4P54764 AC069113.3-201ENST00000521019 150 ntBASIC0.55□□□□□ -2.32
EPHA4P54764 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
EPHA4P54764 Y_RNA.282-201ENST00000364793 102 ntBASIC0.53□□□□□ -2.32
EPHA4P54764 RNU6-1327P-201ENST00000365302 105 ntBASIC0.53□□□□□ -2.32
EPHA4P54764 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
EPHA4P54764 MIR643-201ENST00000385267 97 ntBASIC0.53□□□□□ -2.32
EPHA4P54764 MIR6514-201ENST00000622549 70 ntBASIC0.53□□□□□ -2.32
EPHA4P54764 MIR4711-201ENST00000578274 70 ntBASIC0.52□□□□□ -2.33
EPHA4P54764 Y_RNA.236-201ENST00000364427 111 ntBASIC0.51□□□□□ -2.33
EPHA4P54764 AL353803.5-201ENST00000599815 141 ntBASIC0.51□□□□□ -2.33
EPHA4P54764 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
EPHA4P54764 RNU6-246P-201ENST00000384702 107 ntBASIC0.5□□□□□ -2.33
EPHA4P54764 RNU6-1133P-201ENST00000410963 100 ntBASIC0.5□□□□□ -2.33
EPHA4P54764 MIR610-201ENST00000385139 96 ntBASIC0.49□□□□□ -2.33
EPHA4P54764 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
EPHA4P54764 CR383656.4-201ENST00000546909 122 ntBASIC0.49□□□□□ -2.33
EPHA4P54764 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
EPHA4P54764 AC010487.4-201ENST00000637027 61 ntBASIC0.49□□□□□ -2.33
EPHA4P54764 SNORD114-23-201ENST00000363536 72 ntBASIC0.48□□□□□ -2.33
EPHA4P54764 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
EPHA4P54764 MIR1273G-201ENST00000577677 100 ntBASIC0.48□□□□□ -2.33
EPHA4P54764 MIR4432-201ENST00000581823 84 ntBASIC0.48□□□□□ -2.33
EPHA4P54764 MIR4315-1-201ENST00000636800 73 ntBASIC0.48□□□□□ -2.33
EPHA4P54764 MIR4315-2-201ENST00000640925 73 ntBASIC0.48□□□□□ -2.33
EPHA4P54764 MIR148A-201ENST00000362215 68 ntBASIC0.47□□□□□ -2.33
EPHA4P54764 SNORD115-23-201ENST00000364461 82 ntBASIC0.47□□□□□ -2.33
EPHA4P54764 RNA5SP163-201ENST00000410304 99 ntBASIC0.47□□□□□ -2.33
EPHA4P54764 RNU6-141P-201ENST00000410499 105 ntBASIC0.47□□□□□ -2.33
EPHA4P54764 RNU6-446P-201ENST00000362827 106 ntBASIC0.46□□□□□ -2.34
EPHA4P54764 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
EPHA4P54764 RNU6-231P-201ENST00000517122 103 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms