Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
MRE11P49959 RNU6-895P-201ENST00000384125 103 ntBASIC0.5□□□□□ -2.33
MRE11P49959 AC021146.9-201ENST00000512503 156 ntBASIC0.5□□□□□ -2.33
MRE11P49959 MIR6739-201ENST00000622461 75 ntBASIC0.5□□□□□ -2.33
MRE11P49959 MIR20A-201ENST00000362279 71 ntBASIC0.49□□□□□ -2.33
MRE11P49959 SNORA63.6-201ENST00000364921 119 ntBASIC0.49□□□□□ -2.33
MRE11P49959 AC244090.1-201ENST00000441884 93 ntBASIC0.49□□□□□ -2.33
MRE11P49959 MIR499B-201ENST00000636498 73 ntBASIC0.49□□□□□ -2.33
MRE11P49959 RNU6-645P-201ENST00000364649 106 ntBASIC0.48□□□□□ -2.33
MRE11P49959 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
MRE11P49959 RNU6-663P-201ENST00000391105 106 ntBASIC0.48□□□□□ -2.33
MRE11P49959 Y_RNA.633-201ENST00000459107 95 ntBASIC0.48□□□□□ -2.33
MRE11P49959 RNU7-129P-201ENST00000516128 62 ntBASIC0.48□□□□□ -2.33
MRE11P49959 MIR4493-201ENST00000584016 73 ntBASIC0.48□□□□□ -2.33
MRE11P49959 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.48□□□□□ -2.33
MRE11P49959 AC090625.1-201ENST00000357130 210 ntBASIC0.47□□□□□ -2.33
MRE11P49959 RNU6-1216P-201ENST00000362590 107 ntBASIC0.47□□□□□ -2.33
MRE11P49959 SNORD114-29-201ENST00000364819 70 ntBASIC0.47□□□□□ -2.33
MRE11P49959 RNU6-649P-201ENST00000384463 107 ntBASIC0.47□□□□□ -2.33
MRE11P49959 SNORD30.1-201ENST00000391309 70 ntBASIC0.47□□□□□ -2.33
MRE11P49959 SNX3P1X-201ENST00000414887 175 ntBASIC0.47□□□□□ -2.33
MRE11P49959 RNU7-188P-201ENST00000517063 64 ntBASIC0.47□□□□□ -2.33
MRE11P49959 MIR5190-201ENST00000581537 80 ntBASIC0.47□□□□□ -2.33
MRE11P49959 AC108676.2-201ENST00000605225 163 ntBASIC0.47□□□□□ -2.33
MRE11P49959 MIR6718-201ENST00000616153 80 ntBASIC0.47□□□□□ -2.33
MRE11P49959 SNORD116-24-201ENST00000384549 92 ntBASIC0.46□□□□□ -2.34
MRE11P49959 MIR604-201ENST00000384880 94 ntBASIC0.46□□□□□ -2.34
MRE11P49959 AC104692.1-201ENST00000472406 90 ntBASIC0.46□□□□□ -2.34
MRE11P49959 AC139453.2-201ENST00000487255 133 ntBASIC0.46□□□□□ -2.34
MRE11P49959 RNU6-539P-201ENST00000516665 103 ntBASIC0.46□□□□□ -2.34
MRE11P49959 AC084368.1-201ENST00000620935 65 ntBASIC0.46□□□□□ -2.34
MRE11P49959 RNU6-1162P-201ENST00000384443 104 ntBASIC0.45□□□□□ -2.34
MRE11P49959 RNU6-656P-201ENST00000516785 107 ntBASIC0.45□□□□□ -2.34
MRE11P49959 MIR3925-201ENST00000584674 77 ntBASIC0.45□□□□□ -2.34
MRE11P49959 SNORA15B-2-201ENST00000384058 135 ntBASIC0.44□□□□□ -2.34
MRE11P49959 SNORA15B-1-201ENST00000384334 135 ntBASIC0.44□□□□□ -2.34
MRE11P49959 MIR521-2-201ENST00000384818 87 ntBASIC0.44□□□□□ -2.34
MRE11P49959 MTND4LP1-201ENST00000446263 157 ntBASIC0.44□□□□□ -2.34
MRE11P49959 SNORD95.1-201ENST00000364099 68 ntBASIC0.43□□□□□ -2.34
MRE11P49959 RNU6-815P-201ENST00000384080 113 ntBASIC0.43□□□□□ -2.34
MRE11P49959 SNORD57-201ENST00000448188 72 ntBASIC0.43□□□□□ -2.34
MRE11P49959 RNU6-175P-201ENST00000516896 107 ntBASIC0.43□□□□□ -2.34
MRE11P49959 MIR876-201ENST00000401147 81 ntBASIC0.42□□□□□ -2.34
MRE11P49959 Y_RNA.610-201ENST00000410681 103 ntBASIC0.42□□□□□ -2.34
MRE11P49959 U6.111-201ENST00000636093 83 ntBASIC0.42□□□□□ -2.34
MRE11P49959 SNORA33.1-201ENST00000364957 130 ntBASIC0.41□□□□□ -2.34
MRE11P49959 RNU6-127P-201ENST00000390897 107 ntBASIC0.41□□□□□ -2.34
MRE11P49959 AP001180.6-201ENST00000584918 159 ntBASIC0.41□□□□□ -2.34
MRE11P49959 SNORD114-31-201ENST00000363219 75 ntBASIC0.4□□□□□ -2.35
MRE11P49959 RNU6-668P-201ENST00000364180 107 ntBASIC0.4□□□□□ -2.35
MRE11P49959 Y_RNA.443-201ENST00000384135 111 ntBASIC0.4□□□□□ -2.35
MRE11P49959 RN7SL660P-201ENST00000614852 299 ntBASIC0.4□□□□□ -2.35
MRE11P49959 SNORA49-201ENST00000386157 136 ntBASIC0.39□□□□□ -2.35
MRE11P49959 RNU6-630P-201ENST00000391258 106 ntBASIC0.39□□□□□ -2.35
MRE11P49959 SNORD2-201ENST00000459163 69 ntBASIC0.39□□□□□ -2.35
MRE11P49959 SCARNA11.2-201ENST00000517183 154 ntBASIC0.39□□□□□ -2.35
MRE11P49959 AC069113.3-201ENST00000521019 150 ntBASIC0.39□□□□□ -2.35
MRE11P49959 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
MRE11P49959 SNORA75.1-201ENST00000391130 148 ntBASIC0.38□□□□□ -2.35
MRE11P49959 RNU6-782P-201ENST00000516852 104 ntBASIC0.38□□□□□ -2.35
MRE11P49959 RNU6-800P-201ENST00000384473 103 ntBASIC0.37□□□□□ -2.35
MRE11P49959 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
MRE11P49959 AC005520.4-201ENST00000604337 90 ntBASIC0.37□□□□□ -2.35
MRE11P49959 SNORA25.4-201ENST00000363666 124 ntBASIC0.36□□□□□ -2.35
MRE11P49959 RNU6-590P-201ENST00000365039 107 ntBASIC0.36□□□□□ -2.35
MRE11P49959 Y_RNA.386-201ENST00000383913 105 ntBASIC0.36□□□□□ -2.35
MRE11P49959 RNU6-1036P-201ENST00000383959 104 ntBASIC0.36□□□□□ -2.35
MRE11P49959 AC108740.1-201ENST00000498629 225 ntBASIC0.36□□□□□ -2.35
MRE11P49959 U6.96-201ENST00000636425 70 ntBASIC0.36□□□□□ -2.35
MRE11P49959 RNU6-1089P-201ENST00000516473 104 ntBASIC0.35□□□□□ -2.35
MRE11P49959 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
MRE11P49959 MIR106A-201ENST00000384870 81 ntBASIC0.33□□□□□ -2.36
MRE11P49959 Y_RNA.375-201ENST00000365625 101 ntBASIC0.32□□□□□ -2.36
MRE11P49959 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
MRE11P49959 U2.7-201ENST00000619197 100 ntBASIC0.32□□□□□ -2.36
MRE11P49959 AC090617.8-201ENST00000623339 167 ntBASIC0.32□□□□□ -2.36
MRE11P49959 MIR548C-201ENST00000384815 97 ntBASIC0.31□□□□□ -2.36
MRE11P49959 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
MRE11P49959 CYP3A54P-201ENST00000566950 75 ntBASIC0.31□□□□□ -2.36
MRE11P49959 MIR6773-201ENST00000612812 74 ntBASIC0.31□□□□□ -2.36
MRE11P49959 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
MRE11P49959 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
MRE11P49959 SNORD115-25-201ENST00000362619 82 ntBASIC0.3□□□□□ -2.36
MRE11P49959 RNA5SP215-201ENST00000363440 122 ntBASIC0.3□□□□□ -2.36
MRE11P49959 RNU6-337P-201ENST00000391243 106 ntBASIC0.3□□□□□ -2.36
MRE11P49959 RNY1P9-201ENST00000532431 109 ntBASIC0.3□□□□□ -2.36
MRE11P49959 RNU6-788P-201ENST00000390967 104 ntBASIC0.29□□□□□ -2.36
MRE11P49959 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
MRE11P49959 RNU6-502P-201ENST00000362419 108 ntBASIC0.28□□□□□ -2.36
MRE11P49959 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
MRE11P49959 MIR101-1-201ENST00000362265 75 ntBASIC0.27□□□□□ -2.37
MRE11P49959 SNORD49B-201ENST00000365172 72 ntBASIC0.27□□□□□ -2.37
MRE11P49959 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
MRE11P49959 RNU6-542P-201ENST00000516405 103 ntBASIC0.27□□□□□ -2.37
MRE11P49959 RNU6-471P-201ENST00000383944 106 ntBASIC0.26□□□□□ -2.37
MRE11P49959 MIRLET7B-201ENST00000385140 83 ntBASIC0.26□□□□□ -2.37
MRE11P49959 RPS29P8-201ENST00000445109 171 ntBASIC0.26□□□□□ -2.37
MRE11P49959 RNU7-174P-201ENST00000516248 59 ntBASIC0.26□□□□□ -2.37
MRE11P49959 MIR4768-201ENST00000585270 74 ntBASIC0.26□□□□□ -2.37
MRE11P49959 MIR6514-201ENST00000622549 70 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 385.3 ms