Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RNU6-246P-201ENST00000384702 107 ntBASIC1.03□□□□□ -2.24
GRIK1P39086 MIR579-201ENST00000385221 98 ntBASIC1.03□□□□□ -2.24
GRIK1P39086 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
GRIK1P39086 SNORA36.2-201ENST00000384004 127 ntBASIC1.01□□□□□ -2.25
GRIK1P39086 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.01□□□□□ -2.25
GRIK1P39086 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
GRIK1P39086 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
GRIK1P39086 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
GRIK1P39086 MIR373-201ENST00000362273 69 ntBASIC1□□□□□ -2.25
GRIK1P39086 RNU6-924P-201ENST00000362926 108 ntBASIC1□□□□□ -2.25
GRIK1P39086 RNU6-458P-201ENST00000384179 107 ntBASIC1□□□□□ -2.25
GRIK1P39086 MIR545-201ENST00000385085 106 ntBASIC1□□□□□ -2.25
GRIK1P39086 U6.58-201ENST00000613107 107 ntBASIC1□□□□□ -2.25
GRIK1P39086 MIR6779-201ENST00000617283 64 ntBASIC1□□□□□ -2.25
GRIK1P39086 U2.18-201ENST00000622185 84 ntBASIC1□□□□□ -2.25
GRIK1P39086 RNU4-45P-201ENST00000365469 141 ntBASIC0.99□□□□□ -2.25
GRIK1P39086 Y_RNA.423-201ENST00000384057 113 ntBASIC0.99□□□□□ -2.25
GRIK1P39086 MIRLET7B-201ENST00000385140 83 ntBASIC0.99□□□□□ -2.25
GRIK1P39086 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
GRIK1P39086 RNU6-502P-201ENST00000362419 108 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 RNU6-598P-201ENST00000364017 105 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 RNU6-1036P-201ENST00000383959 104 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 RNU7-154P-201ENST00000516194 62 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 RNU6-782P-201ENST00000516852 104 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
GRIK1P39086 MIR6755-201ENST00000619993 66 ntBASIC0.97□□□□□ -2.25
GRIK1P39086 MIR501-201ENST00000390204 84 ntBASIC0.96□□□□□ -2.26
GRIK1P39086 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
GRIK1P39086 MIR5706-201ENST00000579841 80 ntBASIC0.96□□□□□ -2.26
GRIK1P39086 RN7SL660P-201ENST00000614852 299 ntBASIC0.96□□□□□ -2.26
GRIK1P39086 SNORD114-29-201ENST00000364819 70 ntBASIC0.95□□□□□ -2.26
GRIK1P39086 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
GRIK1P39086 MIR140-201ENST00000385282 100 ntBASIC0.95□□□□□ -2.26
GRIK1P39086 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
GRIK1P39086 MIR4677-201ENST00000584153 80 ntBASIC0.95□□□□□ -2.26
GRIK1P39086 SNORD118-201ENST00000363593 134 ntBASIC0.94□□□□□ -2.26
GRIK1P39086 RNU6-229P-201ENST00000516614 102 ntBASIC0.94□□□□□ -2.26
GRIK1P39086 RNU6-419P-201ENST00000517030 63 ntBASIC0.94□□□□□ -2.26
GRIK1P39086 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
GRIK1P39086 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
GRIK1P39086 RNU6-838P-201ENST00000363399 108 ntBASIC0.93□□□□□ -2.26
GRIK1P39086 SNORA2A-201ENST00000383885 135 ntBASIC0.93□□□□□ -2.26
GRIK1P39086 RNU7-151P-201ENST00000516930 53 ntBASIC0.93□□□□□ -2.26
GRIK1P39086 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
GRIK1P39086 RNU6-986P-201ENST00000363133 102 ntBASIC0.91□□□□□ -2.26
GRIK1P39086 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
GRIK1P39086 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
GRIK1P39086 AL353803.5-201ENST00000599815 141 ntBASIC0.91□□□□□ -2.26
GRIK1P39086 RNA5SP325-201ENST00000363756 130 ntBASIC0.9□□□□□ -2.27
GRIK1P39086 RNA5SP436-201ENST00000516020 115 ntBASIC0.9□□□□□ -2.27
GRIK1P39086 Y_RNA.698-201ENST00000516798 118 ntBASIC0.9□□□□□ -2.27
GRIK1P39086 MIR3925-201ENST00000584674 77 ntBASIC0.9□□□□□ -2.27
GRIK1P39086 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
GRIK1P39086 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
GRIK1P39086 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
GRIK1P39086 Y_RNA.69-201ENST00000362885 109 ntBASIC0.89□□□□□ -2.27
GRIK1P39086 RNA5SP470-201ENST00000516463 106 ntBASIC0.89□□□□□ -2.27
GRIK1P39086 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
GRIK1P39086 AC084368.1-201ENST00000620935 65 ntBASIC0.89□□□□□ -2.27
GRIK1P39086 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
GRIK1P39086 SNORA40.8-201ENST00000411034 126 ntBASIC0.88□□□□□ -2.27
GRIK1P39086 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.88□□□□□ -2.27
GRIK1P39086 MIR499B-201ENST00000636498 73 ntBASIC0.88□□□□□ -2.27
GRIK1P39086 MIR760-201ENST00000390220 80 ntBASIC0.87□□□□□ -2.27
GRIK1P39086 MIR4432-201ENST00000581823 84 ntBASIC0.87□□□□□ -2.27
GRIK1P39086 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
GRIK1P39086 SNORD115-23-201ENST00000364461 82 ntBASIC0.86□□□□□ -2.27
GRIK1P39086 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
GRIK1P39086 SNORD2-201ENST00000459163 69 ntBASIC0.86□□□□□ -2.27
GRIK1P39086 RNU6-1262P-201ENST00000516217 96 ntBASIC0.86□□□□□ -2.27
GRIK1P39086 RNU6-1206P-201ENST00000516339 103 ntBASIC0.86□□□□□ -2.27
GRIK1P39086 AP000676.1-201ENST00000533307 52 ntBASIC0.86□□□□□ -2.27
GRIK1P39086 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
GRIK1P39086 RNU6-974P-201ENST00000384099 108 ntBASIC0.85□□□□□ -2.27
GRIK1P39086 RNU7-88P-201ENST00000458752 63 ntBASIC0.85□□□□□ -2.27
GRIK1P39086 MIR429-201ENST00000362106 83 ntBASIC0.84□□□□□ -2.27
GRIK1P39086 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
GRIK1P39086 RNU6-1267P-201ENST00000410747 107 ntBASIC0.84□□□□□ -2.27
GRIK1P39086 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
GRIK1P39086 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
GRIK1P39086 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
GRIK1P39086 RNU7-129P-201ENST00000516128 62 ntBASIC0.83□□□□□ -2.28
GRIK1P39086 U7.6-201ENST00000610841 64 ntBASIC0.83□□□□□ -2.28
GRIK1P39086 RNU6-247P-201ENST00000362636 107 ntBASIC0.82□□□□□ -2.28
GRIK1P39086 U7.5-201ENST00000517224 61 ntBASIC0.82□□□□□ -2.28
GRIK1P39086 MIR4464-201ENST00000580818 92 ntBASIC0.82□□□□□ -2.28
GRIK1P39086 AC108676.2-201ENST00000605225 163 ntBASIC0.82□□□□□ -2.28
GRIK1P39086 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
GRIK1P39086 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
GRIK1P39086 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.81□□□□□ -2.28
GRIK1P39086 MIR4714-201ENST00000580728 77 ntBASIC0.81□□□□□ -2.28
GRIK1P39086 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
GRIK1P39086 MIR6888-201ENST00000621977 67 ntBASIC0.81□□□□□ -2.28
GRIK1P39086 uc_338.36-201ENST00000622331 158 ntBASIC0.81□□□□□ -2.28
GRIK1P39086 MIR125B1-201ENST00000385236 88 ntBASIC0.8□□□□□ -2.28
GRIK1P39086 MIR876-201ENST00000401147 81 ntBASIC0.8□□□□□ -2.28
GRIK1P39086 SNORD71-201ENST00000411292 86 ntBASIC0.8□□□□□ -2.28
GRIK1P39086 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
GRIK1P39086 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms