Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.08□□□□□ -2.42
HOXD12P35452 Z95118.1-201ENST00000421372 247 ntBASIC-0.08□□□□□ -2.42
HOXD12P35452 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.08□□□□□ -2.42
HOXD12P35452 MIR3675-201ENST00000583661 73 ntBASIC-0.08□□□□□ -2.42
HOXD12P35452 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
HOXD12P35452 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.09□□□□□ -2.42
HOXD12P35452 AC244250.2-201ENST00000418731 148 ntBASIC-0.09□□□□□ -2.42
HOXD12P35452 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
HOXD12P35452 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
HOXD12P35452 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
HOXD12P35452 SNORA8.1-201ENST00000384250 140 ntBASIC-0.1□□□□□ -2.43
HOXD12P35452 MIR3202-2-201ENST00000635980 79 ntBASIC-0.1□□□□□ -2.43
HOXD12P35452 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.11□□□□□ -2.43
HOXD12P35452 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.11□□□□□ -2.43
HOXD12P35452 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.11□□□□□ -2.43
HOXD12P35452 U6.96-201ENST00000636425 70 ntBASIC-0.11□□□□□ -2.43
HOXD12P35452 RNU6-502P-201ENST00000362419 108 ntBASIC-0.12□□□□□ -2.43
HOXD12P35452 RNU6-337P-201ENST00000391243 106 ntBASIC-0.12□□□□□ -2.43
HOXD12P35452 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
HOXD12P35452 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.13□□□□□ -2.43
HOXD12P35452 RNU6-455P-201ENST00000384681 107 ntBASIC-0.13□□□□□ -2.43
HOXD12P35452 MIR9-2-201ENST00000384838 87 ntBASIC-0.13□□□□□ -2.43
HOXD12P35452 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.14□□□□□ -2.43
HOXD12P35452 MIR4802-201ENST00000581881 80 ntBASIC-0.14□□□□□ -2.43
HOXD12P35452 MIR6773-201ENST00000612812 74 ntBASIC-0.14□□□□□ -2.43
HOXD12P35452 SNORD49B-201ENST00000365172 72 ntBASIC-0.15□□□□□ -2.43
HOXD12P35452 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
HOXD12P35452 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
HOXD12P35452 SCARNA18B-201ENST00000458806 135 ntBASIC-0.15□□□□□ -2.43
HOXD12P35452 RNU7-55P-201ENST00000459426 62 ntBASIC-0.15□□□□□ -2.43
HOXD12P35452 MIR6739-201ENST00000622461 75 ntBASIC-0.15□□□□□ -2.43
HOXD12P35452 AC090617.8-201ENST00000623339 167 ntBASIC-0.15□□□□□ -2.43
HOXD12P35452 RNU6-228P-201ENST00000362700 106 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 SNORD45.1-201ENST00000363181 77 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 SNORD114-31-201ENST00000363219 75 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 SNORA18.1-201ENST00000363418 128 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 SNORA33.1-201ENST00000364957 130 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 MIR521-2-201ENST00000384818 87 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 MIR1255A-201ENST00000408338 113 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 RNA5SP25-201ENST00000410815 110 ntBASIC-0.16□□□□□ -2.44
HOXD12P35452 RNU6-900P-201ENST00000384498 102 ntBASIC-0.17□□□□□ -2.44
HOXD12P35452 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
HOXD12P35452 SNORD78.1-201ENST00000390866 65 ntBASIC-0.18□□□□□ -2.44
HOXD12P35452 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.18□□□□□ -2.44
HOXD12P35452 AL590491.3-201ENST00000610731 82 ntBASIC-0.18□□□□□ -2.44
HOXD12P35452 MIRLET7B-201ENST00000385140 83 ntBASIC-0.19□□□□□ -2.44
HOXD12P35452 RNU6-604P-201ENST00000390917 100 ntBASIC-0.19□□□□□ -2.44
HOXD12P35452 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
HOXD12P35452 RNU6-758P-201ENST00000516292 89 ntBASIC-0.19□□□□□ -2.44
HOXD12P35452 MIR664A-201ENST00000626086 82 ntBASIC-0.19□□□□□ -2.44
HOXD12P35452 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
HOXD12P35452 SNORD56B-201ENST00000384713 71 ntBASIC-0.21□□□□□ -2.44
HOXD12P35452 RNU6-70P-201ENST00000516438 60 ntBASIC-0.21□□□□□ -2.44
HOXD12P35452 uc_338.36-201ENST00000622331 158 ntBASIC-0.21□□□□□ -2.44
HOXD12P35452 SNORD115-23-201ENST00000364461 82 ntBASIC-0.22□□□□□ -2.44
HOXD12P35452 RNU6-656P-201ENST00000516785 107 ntBASIC-0.22□□□□□ -2.44
HOXD12P35452 CYP3A54P-201ENST00000566950 75 ntBASIC-0.22□□□□□ -2.44
HOXD12P35452 MIR3666-201ENST00000607845 111 ntBASIC-0.22□□□□□ -2.44
HOXD12P35452 RNU6-645P-201ENST00000364649 106 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 RNU6-901P-201ENST00000384593 106 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 SNORA72.7-201ENST00000516349 94 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 MIR4280-201ENST00000582178 76 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 MIR4645-201ENST00000583158 77 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 MIR4263-201ENST00000584745 83 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 snoR1.1-201ENST00000628177 80 ntBASIC-0.23□□□□□ -2.45
HOXD12P35452 RNU6-973P-201ENST00000364690 107 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 RNA5SP300-201ENST00000391197 107 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 RNU6-279P-201ENST00000391297 101 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 RNU6-857P-201ENST00000515893 110 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 AP001180.6-201ENST00000584918 159 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 MIR8053-201ENST00000613344 75 ntBASIC-0.24□□□□□ -2.45
HOXD12P35452 MIR1255B2-201ENST00000408618 67 ntBASIC-0.25□□□□□ -2.45
HOXD12P35452 snoU13.19-201ENST00000459148 104 ntBASIC-0.25□□□□□ -2.45
HOXD12P35452 RNU6-881P-201ENST00000516813 102 ntBASIC-0.25□□□□□ -2.45
HOXD12P35452 U7.4-201ENST00000614961 63 ntBASIC-0.25□□□□□ -2.45
HOXD12P35452 AL391099.1-201ENST00000624635 187 ntBASIC-0.25□□□□□ -2.45
HOXD12P35452 SNORD115-22-201ENST00000364456 82 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 SNORD114-15-201ENST00000364687 72 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 RNU6-24P-201ENST00000384440 107 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 RNA5SP225-201ENST00000410874 135 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 RNU6-982P-201ENST00000516216 102 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 MIR3134-201ENST00000579433 74 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 MIR4493-201ENST00000584016 73 ntBASIC-0.26□□□□□ -2.45
HOXD12P35452 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
HOXD12P35452 MIR4432-201ENST00000581823 84 ntBASIC-0.27□□□□□ -2.45
HOXD12P35452 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.28□□□□□ -2.45
HOXD12P35452 MIR154-201ENST00000385243 84 ntBASIC-0.28□□□□□ -2.45
HOXD12P35452 AL445193.1-201ENST00000441183 141 ntBASIC-0.28□□□□□ -2.45
HOXD12P35452 SNORD45A-201ENST00000384512 84 ntBASIC-0.29□□□□□ -2.46
HOXD12P35452 MIR604-201ENST00000384880 94 ntBASIC-0.29□□□□□ -2.46
HOXD12P35452 AC114755.3-201ENST00000481111 251 ntBASIC-0.29□□□□□ -2.46
HOXD12P35452 RNA5SP66-201ENST00000517178 101 ntBASIC-0.29□□□□□ -2.46
HOXD12P35452 MIR5704-201ENST00000584029 77 ntBASIC-0.29□□□□□ -2.46
HOXD12P35452 MIR8068-201ENST00000618032 68 ntBASIC-0.29□□□□□ -2.46
HOXD12P35452 SNORD113.1-201ENST00000363280 73 ntBASIC-0.3□□□□□ -2.46
HOXD12P35452 SNORD114-11-201ENST00000363738 75 ntBASIC-0.3□□□□□ -2.46
HOXD12P35452 RNU6-587P-201ENST00000391282 106 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms