Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AL021921.1-201ENST00000442774 93 ntBASIC1.21□□□□□ -2.22
CHGAP10645 MIR548AD-201ENST00000584780 82 ntBASIC1.21□□□□□ -2.22
CHGAP10645 RNU6-1079P-201ENST00000362861 110 ntBASIC1.2□□□□□ -2.22
CHGAP10645 RNA5SP62-201ENST00000363457 110 ntBASIC1.2□□□□□ -2.22
CHGAP10645 MIR760-201ENST00000390220 80 ntBASIC1.19□□□□□ -2.22
CHGAP10645 SNORA75.1-201ENST00000391130 148 ntBASIC1.19□□□□□ -2.22
CHGAP10645 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.19□□□□□ -2.22
CHGAP10645 AC084368.1-201ENST00000620935 65 ntBASIC1.19□□□□□ -2.22
CHGAP10645 Y_RNA.246-201ENST00000364495 108 ntBASIC1.18□□□□□ -2.22
CHGAP10645 MIR3938-201ENST00000582157 103 ntBASIC1.18□□□□□ -2.22
CHGAP10645 MIR8087-201ENST00000612745 78 ntBASIC1.18□□□□□ -2.22
CHGAP10645 AC243829.3-201ENST00000622177 108 ntBASIC1.18□□□□□ -2.22
CHGAP10645 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.18□□□□□ -2.22
CHGAP10645 RNU4-37P-201ENST00000410214 84 ntBASIC1.17□□□□□ -2.22
CHGAP10645 RNU6-829P-201ENST00000363700 112 ntBASIC1.16□□□□□ -2.22
CHGAP10645 RNA5SP128-201ENST00000365305 116 ntBASIC1.15□□□□□ -2.23
CHGAP10645 RNU6-614P-201ENST00000384369 107 ntBASIC1.15□□□□□ -2.23
CHGAP10645 HAR1A.1-201ENST00000459583 118 ntBASIC1.15□□□□□ -2.23
CHGAP10645 RNU6-175P-201ENST00000516896 107 ntBASIC1.15□□□□□ -2.23
CHGAP10645 MIR4653-201ENST00000585107 83 ntBASIC1.15□□□□□ -2.23
CHGAP10645 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
CHGAP10645 U6.59-201ENST00000615686 107 ntBASIC1.15□□□□□ -2.23
CHGAP10645 MIR6835-201ENST00000621552 64 ntBASIC1.15□□□□□ -2.23
CHGAP10645 AC090617.8-201ENST00000623339 167 ntBASIC1.15□□□□□ -2.23
CHGAP10645 MIR508-201ENST00000384857 115 ntBASIC1.14□□□□□ -2.23
CHGAP10645 RNU6-518P-201ENST00000516056 96 ntBASIC1.13□□□□□ -2.23
CHGAP10645 MIR1255B2-201ENST00000408618 67 ntBASIC1.12□□□□□ -2.23
CHGAP10645 SNORD114-2-201ENST00000363953 78 ntBASIC1.11□□□□□ -2.23
CHGAP10645 SNORA49-201ENST00000386157 136 ntBASIC1.11□□□□□ -2.23
CHGAP10645 RNA5SP193-201ENST00000410353 107 ntBASIC1.11□□□□□ -2.23
CHGAP10645 MIR6773-201ENST00000612812 74 ntBASIC1.11□□□□□ -2.23
CHGAP10645 MIR330-201ENST00000362196 94 ntBASIC1.1□□□□□ -2.23
CHGAP10645 RNU6-945P-201ENST00000383947 107 ntBASIC1.1□□□□□ -2.23
CHGAP10645 MIR6866-201ENST00000638146 69 ntBASIC1.1□□□□□ -2.23
CHGAP10645 SNORD44.1-201ENST00000363202 61 ntBASIC1.09□□□□□ -2.23
CHGAP10645 Y_RNA.325-201ENST00000365171 122 ntBASIC1.09□□□□□ -2.23
CHGAP10645 RNU6-337P-201ENST00000391243 106 ntBASIC1.09□□□□□ -2.23
CHGAP10645 MIR1197-201ENST00000408818 88 ntBASIC1.09□□□□□ -2.23
CHGAP10645 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.09□□□□□ -2.23
CHGAP10645 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CHGAP10645 RPL39P28-201ENST00000465655 155 ntBASIC1.08□□□□□ -2.24
CHGAP10645 MIR876-201ENST00000401147 81 ntBASIC1.07□□□□□ -2.24
CHGAP10645 RNU6-351P-201ENST00000516097 100 ntBASIC1.07□□□□□ -2.24
CHGAP10645 Y_RNA.74-201ENST00000362911 99 ntBASIC1.06□□□□□ -2.24
CHGAP10645 RNU6-1036P-201ENST00000383959 104 ntBASIC1.06□□□□□ -2.24
CHGAP10645 MIR519A2-201ENST00000384990 87 ntBASIC1.06□□□□□ -2.24
CHGAP10645 RNA5SP470-201ENST00000516463 106 ntBASIC1.06□□□□□ -2.24
CHGAP10645 MIR4711-201ENST00000578274 70 ntBASIC1.06□□□□□ -2.24
CHGAP10645 SNORA9.1-201ENST00000362412 131 ntBASIC1.05□□□□□ -2.24
CHGAP10645 Y_RNA.236-201ENST00000364427 111 ntBASIC1.05□□□□□ -2.24
CHGAP10645 MIR3925-201ENST00000584674 77 ntBASIC1.05□□□□□ -2.24
CHGAP10645 MIR499B-201ENST00000636498 73 ntBASIC1.05□□□□□ -2.24
CHGAP10645 RNU6-35P-201ENST00000384530 107 ntBASIC1.04□□□□□ -2.24
CHGAP10645 RNU7-129P-201ENST00000516128 62 ntBASIC1.04□□□□□ -2.24
CHGAP10645 RN7SL660P-201ENST00000614852 299 ntBASIC1.04□□□□□ -2.24
CHGAP10645 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHGAP10645 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHGAP10645 SNORD115-25-201ENST00000362619 82 ntBASIC1.02□□□□□ -2.25
CHGAP10645 RNU6-446P-201ENST00000362827 106 ntBASIC1.02□□□□□ -2.25
CHGAP10645 RNU7-154P-201ENST00000516194 62 ntBASIC1.02□□□□□ -2.25
CHGAP10645 RNU6-502P-201ENST00000362419 108 ntBASIC1.01□□□□□ -2.25
CHGAP10645 MIRLET7B-201ENST00000385140 83 ntBASIC1.01□□□□□ -2.25
CHGAP10645 RNU6-1246P-201ENST00000391064 107 ntBASIC1.01□□□□□ -2.25
CHGAP10645 SNORA41B-201ENST00000384785 128 ntBASIC1□□□□□ -2.25
CHGAP10645 MIR2909-201ENST00000617113 69 ntBASIC1□□□□□ -2.25
CHGAP10645 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CHGAP10645 MIR106A-201ENST00000384870 81 ntBASIC0.99□□□□□ -2.25
CHGAP10645 SCARNA11.2-201ENST00000517183 154 ntBASIC0.97□□□□□ -2.25
CHGAP10645 RNA5SP347-201ENST00000362445 119 ntBASIC0.96□□□□□ -2.26
CHGAP10645 RNU6-520P-201ENST00000384717 104 ntBASIC0.96□□□□□ -2.26
CHGAP10645 RNU6-141P-201ENST00000410499 105 ntBASIC0.96□□□□□ -2.26
CHGAP10645 RNU6-782P-201ENST00000516852 104 ntBASIC0.96□□□□□ -2.26
CHGAP10645 SNORD116-16-201ENST00000384533 92 ntBASIC0.95□□□□□ -2.26
CHGAP10645 MIR527-201ENST00000385244 85 ntBASIC0.95□□□□□ -2.26
CHGAP10645 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.95□□□□□ -2.26
CHGAP10645 SNORA68.3-201ENST00000515906 83 ntBASIC0.95□□□□□ -2.26
CHGAP10645 Y_RNA.282-201ENST00000364793 102 ntBASIC0.93□□□□□ -2.26
CHGAP10645 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
CHGAP10645 MIR103A1-201ENST00000362165 78 ntBASIC0.91□□□□□ -2.26
CHGAP10645 MIRLET7D-201ENST00000362263 87 ntBASIC0.91□□□□□ -2.26
CHGAP10645 RNA5SP499-201ENST00000363982 119 ntBASIC0.91□□□□□ -2.26
CHGAP10645 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.91□□□□□ -2.26
CHGAP10645 RNU7-119P-201ENST00000459279 63 ntBASIC0.91□□□□□ -2.26
CHGAP10645 uc_338.17-201ENST00000619633 179 ntBASIC0.91□□□□□ -2.26
CHGAP10645 MIR6086-201ENST00000638065 55 ntBASIC0.91□□□□□ -2.26
CHGAP10645 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
CHGAP10645 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
CHGAP10645 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.88□□□□□ -2.27
CHGAP10645 AP000676.1-201ENST00000533307 52 ntBASIC0.87□□□□□ -2.27
CHGAP10645 MIR429-201ENST00000362106 83 ntBASIC0.86□□□□□ -2.27
CHGAP10645 RNA5SP98-201ENST00000363158 137 ntBASIC0.86□□□□□ -2.27
CHGAP10645 RNU6-127P-201ENST00000390897 107 ntBASIC0.86□□□□□ -2.27
CHGAP10645 AC108740.1-201ENST00000498629 225 ntBASIC0.84□□□□□ -2.27
CHGAP10645 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.84□□□□□ -2.27
CHGAP10645 RNU6-815P-201ENST00000384080 113 ntBASIC0.83□□□□□ -2.28
CHGAP10645 RNU6-231P-201ENST00000517122 103 ntBASIC0.83□□□□□ -2.28
CHGAP10645 SNORD113-4-201ENST00000364802 75 ntBASIC0.82□□□□□ -2.28
CHGAP10645 RNU6-246P-201ENST00000384702 107 ntBASIC0.82□□□□□ -2.28
CHGAP10645 SNORD115-23-201ENST00000364461 82 ntBASIC0.81□□□□□ -2.28
CHGAP10645 AL353803.5-201ENST00000599815 141 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms