Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORA19-201ENST00000384737 128 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 MIR1255B2-201ENST00000408618 67 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 SCARNA17-201ENST00000516183 144 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 RNU6-479P-201ENST00000516348 105 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 MIR4324-201ENST00000584846 72 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 AC006254.2-201ENST00000603259 279 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 AL445584.3-201ENST00000617173 78 ntBASIC-0.82□□□□□ -2.54
RTN3O95197 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.83□□□□□ -2.54
RTN3O95197 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.83□□□□□ -2.54
RTN3O95197 MIR1207-201ENST00000408249 87 ntBASIC-0.83□□□□□ -2.54
RTN3O95197 RNU6-313P-201ENST00000516317 112 ntBASIC-0.83□□□□□ -2.54
RTN3O95197 MIR4796-201ENST00000580742 81 ntBASIC-0.83□□□□□ -2.54
RTN3O95197 AC132825.6-201ENST00000638861 357 ntBASIC-0.83□□□□□ -2.54
RTN3O95197 RNU6-766P-201ENST00000362478 107 ntBASIC-0.84□□□□□ -2.54
RTN3O95197 MIR147A-201ENST00000385079 72 ntBASIC-0.84□□□□□ -2.54
RTN3O95197 CYP3A54P-201ENST00000566950 75 ntBASIC-0.84□□□□□ -2.54
RTN3O95197 SNORA2.1-201ENST00000363089 137 ntBASIC-0.85□□□□□ -2.55
RTN3O95197 SNORD115-27-201ENST00000364430 82 ntBASIC-0.85□□□□□ -2.55
RTN3O95197 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.85□□□□□ -2.55
RTN3O95197 AL691482.2-201ENST00000457453 84 ntBASIC-0.85□□□□□ -2.55
RTN3O95197 MIR3910-1-201ENST00000580936 111 ntBASIC-0.85□□□□□ -2.55
RTN3O95197 U6.81-201ENST00000612550 106 ntBASIC-0.85□□□□□ -2.55
RTN3O95197 SNORA62.4-201ENST00000365504 151 ntBASIC-0.86□□□□□ -2.55
RTN3O95197 U7.3-201ENST00000616123 62 ntBASIC-0.86□□□□□ -2.55
RTN3O95197 MIR382-201ENST00000637119 76 ntBASIC-0.86□□□□□ -2.55
RTN3O95197 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.87□□□□□ -2.55
RTN3O95197 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.87□□□□□ -2.55
RTN3O95197 MIR1236-201ENST00000408340 102 ntBASIC-0.87□□□□□ -2.55
RTN3O95197 MIR378F-201ENST00000578143 78 ntBASIC-0.87□□□□□ -2.55
RTN3O95197 MIR548AG1-201ENST00000579932 66 ntBASIC-0.87□□□□□ -2.55
RTN3O95197 SNORD83B-201ENST00000386745 93 ntBASIC-0.88□□□□□ -2.55
RTN3O95197 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.88□□□□□ -2.55
RTN3O95197 MIR4499-201ENST00000584834 69 ntBASIC-0.88□□□□□ -2.55
RTN3O95197 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.89□□□□□ -2.55
RTN3O95197 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.89□□□□□ -2.55
RTN3O95197 MIR519A2-201ENST00000384990 87 ntBASIC-0.89□□□□□ -2.55
RTN3O95197 RNU6-274P-201ENST00000459566 107 ntBASIC-0.89□□□□□ -2.55
RTN3O95197 uc_338.19-201ENST00000616808 99 ntBASIC-0.89□□□□□ -2.55
RTN3O95197 SNORD114-3-201ENST00000364969 75 ntBASIC-0.9□□□□□ -2.55
RTN3O95197 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.9□□□□□ -2.55
RTN3O95197 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.9□□□□□ -2.55
RTN3O95197 RNU6-158P-201ENST00000517104 100 ntBASIC-0.9□□□□□ -2.55
RTN3O95197 MIR521-2-201ENST00000384818 87 ntBASIC-0.91□□□□□ -2.56
RTN3O95197 SCARNA18B-201ENST00000458806 135 ntBASIC-0.91□□□□□ -2.56
RTN3O95197 AC140658.3-201ENST00000567603 271 ntBASIC-0.91□□□□□ -2.56
RTN3O95197 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.92□□□□□ -2.56
RTN3O95197 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.92□□□□□ -2.56
RTN3O95197 RNU2-51P-201ENST00000410708 197 ntBASIC-0.92□□□□□ -2.56
RTN3O95197 RNA5SP192-201ENST00000364404 120 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 SNORD115-22-201ENST00000364456 82 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 AL031737.1-201ENST00000450125 223 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 SNORD63.1-201ENST00000516178 80 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 RNA5SP470-201ENST00000516463 106 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
RTN3O95197 MIR6739-201ENST00000622461 75 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 MIR2052-201ENST00000636055 55 ntBASIC-0.93□□□□□ -2.56
RTN3O95197 RNU6-340P-201ENST00000364005 107 ntBASIC-0.94□□□□□ -2.56
RTN3O95197 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.94□□□□□ -2.56
RTN3O95197 RNU7-134P-201ENST00000458997 64 ntBASIC-0.94□□□□□ -2.56
RTN3O95197 RNU6-518P-201ENST00000516056 96 ntBASIC-0.94□□□□□ -2.56
RTN3O95197 MIR3165-201ENST00000579874 75 ntBASIC-0.94□□□□□ -2.56
RTN3O95197 MTATP8P2-201ENST00000435212 202 ntBASIC-0.95□□□□□ -2.56
RTN3O95197 AL450471.1-201ENST00000447509 127 ntBASIC-0.95□□□□□ -2.56
RTN3O95197 RNU6-656P-201ENST00000516785 107 ntBASIC-0.95□□□□□ -2.56
RTN3O95197 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.95□□□□□ -2.56
RTN3O95197 SNORD113-1-201ENST00000365321 69 ntBASIC-0.96□□□□□ -2.56
RTN3O95197 AL035461.1-201ENST00000421490 332 ntBASIC-0.96□□□□□ -2.56
RTN3O95197 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.96□□□□□ -2.56
RTN3O95197 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.97□□□□□ -2.56
RTN3O95197 RNU6-24P-201ENST00000384440 107 ntBASIC-0.97□□□□□ -2.56
RTN3O95197 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
RTN3O95197 snoU83B.1-201ENST00000517136 88 ntBASIC-0.97□□□□□ -2.56
RTN3O95197 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.97□□□□□ -2.56
RTN3O95197 RNU6-924P-201ENST00000362926 108 ntBASIC-0.98□□□□□ -2.57
RTN3O95197 SNORA26.4-201ENST00000391188 123 ntBASIC-0.98□□□□□ -2.57
RTN3O95197 RNU7-154P-201ENST00000516194 62 ntBASIC-0.98□□□□□ -2.57
RTN3O95197 MIR365A-201ENST00000362260 87 ntBASIC-0.99□□□□□ -2.57
RTN3O95197 RNU6-246P-201ENST00000384702 107 ntBASIC-0.99□□□□□ -2.57
RTN3O95197 MIR519C-201ENST00000385053 87 ntBASIC-0.99□□□□□ -2.57
RTN3O95197 SNORD77.2-201ENST00000391045 68 ntBASIC-0.99□□□□□ -2.57
RTN3O95197 AP002795.1-201ENST00000534879 84 ntBASIC-0.99□□□□□ -2.57
RTN3O95197 MIR3115-201ENST00000577915 68 ntBASIC-0.99□□□□□ -2.57
RTN3O95197 RNU6-330P-201ENST00000363015 107 ntBASIC-1□□□□□ -2.57
RTN3O95197 RNU7-88P-201ENST00000458752 63 ntBASIC-1□□□□□ -2.57
RTN3O95197 RNA5SP461-201ENST00000516451 104 ntBASIC-1□□□□□ -2.57
RTN3O95197 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
RTN3O95197 MIR450A1-201ENST00000362262 91 ntBASIC-1.01□□□□□ -2.57
RTN3O95197 AL603908.1-201ENST00000406098 201 ntBASIC-1.01□□□□□ -2.57
RTN3O95197 RNU6-752P-201ENST00000516376 102 ntBASIC-1.01□□□□□ -2.57
RTN3O95197 RNU6-267P-201ENST00000516714 103 ntBASIC-1.01□□□□□ -2.57
RTN3O95197 U7.5-201ENST00000517224 61 ntBASIC-1.01□□□□□ -2.57
RTN3O95197 RNU6-633P-201ENST00000362612 103 ntBASIC-1.02□□□□□ -2.57
RTN3O95197 SNORD115-33-201ENST00000363723 82 ntBASIC-1.02□□□□□ -2.57
RTN3O95197 RNY4P18-201ENST00000391107 89 ntBASIC-1.02□□□□□ -2.57
RTN3O95197 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.02□□□□□ -2.57
RTN3O95197 MIR4668-201ENST00000582284 70 ntBASIC-1.02□□□□□ -2.57
RTN3O95197 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 520.7 ms