Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.53□□□□□ -2.65
SNRNP200O75643 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.53□□□□□ -2.65
SNRNP200O75643 SNORD115-37-201ENST00000363768 82 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 RNU6-704P-201ENST00000364162 103 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 RNU6-813P-201ENST00000384691 107 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 RNU6-518P-201ENST00000516056 96 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 RNU6-111P-201ENST00000517179 105 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.54□□□□□ -2.66
SNRNP200O75643 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 MIR487B-201ENST00000385021 84 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 RNA5SP86-201ENST00000390869 98 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 AL117187.1-201ENST00000555482 181 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 MIR4801-201ENST00000582704 82 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 MIR3123-201ENST00000583417 75 ntBASIC-1.55□□□□□ -2.66
SNRNP200O75643 RNU6-228P-201ENST00000362700 106 ntBASIC-1.56□□□□□ -2.66
SNRNP200O75643 RNU6-563P-201ENST00000364872 108 ntBASIC-1.56□□□□□ -2.66
SNRNP200O75643 SNORD77.2-201ENST00000391045 68 ntBASIC-1.56□□□□□ -2.66
SNRNP200O75643 MIR548H1-201ENST00000408610 102 ntBASIC-1.56□□□□□ -2.66
SNRNP200O75643 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.57□□□□□ -2.66
SNRNP200O75643 MIR3144-201ENST00000579460 79 ntBASIC-1.57□□□□□ -2.66
SNRNP200O75643 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.57□□□□□ -2.66
SNRNP200O75643 MIR548X2-201ENST00000579776 100 ntBASIC-1.57□□□□□ -2.66
SNRNP200O75643 RNU6-119P-201ENST00000364882 107 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 SNORD90-201ENST00000391145 111 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 AC108019.1-201ENST00000512540 175 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 RNU6-732P-201ENST00000516033 103 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 RNU6-698P-201ENST00000363523 107 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 RNU6-34P-201ENST00000364874 107 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 RNU6-841P-201ENST00000383872 107 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 RNU6-887P-201ENST00000410660 100 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 RNU6-983P-201ENST00000516004 103 ntBASIC-1.58□□□□□ -2.66
SNRNP200O75643 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.59□□□□□ -2.66
SNRNP200O75643 RNU6-540P-201ENST00000384622 101 ntBASIC-1.59□□□□□ -2.66
SNRNP200O75643 RNU6-258P-201ENST00000390884 101 ntBASIC-1.59□□□□□ -2.66
SNRNP200O75643 MIR3675-201ENST00000583661 73 ntBASIC-1.59□□□□□ -2.66
SNRNP200O75643 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 SNORA20.1-201ENST00000364790 130 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.6□□□□□ -2.66
SNRNP200O75643 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 RNU6-795P-201ENST00000516323 103 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 MIR3170-201ENST00000582699 77 ntBASIC-1.6□□□□□ -2.66
SNRNP200O75643 RNU6-982P-201ENST00000516216 102 ntBASIC-1.6□□□□□ -2.67
SNRNP200O75643 MIR4756-201ENST00000577874 78 ntBASIC-1.6□□□□□ -2.67
SNRNP200O75643 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.6□□□□□ -2.67
SNRNP200O75643 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.61□□□□□ -2.67
SNRNP200O75643 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.61□□□□□ -2.67
SNRNP200O75643 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.61□□□□□ -2.67
SNRNP200O75643 SNORD1B-201ENST00000363091 84 ntBASIC-1.62□□□□□ -2.67
SNRNP200O75643 SNORD18.1-201ENST00000363807 70 ntBASIC-1.62□□□□□ -2.67
SNRNP200O75643 MIR1236-201ENST00000408340 102 ntBASIC-1.62□□□□□ -2.67
SNRNP200O75643 MTND4LP9-201ENST00000427694 174 ntBASIC-1.62□□□□□ -2.67
SNRNP200O75643 RNA5SP272-201ENST00000516095 111 ntBASIC-1.62□□□□□ -2.67
SNRNP200O75643 RNU6-904P-201ENST00000516206 101 ntBASIC-1.62□□□□□ -2.67
SNRNP200O75643 MIR429-201ENST00000362106 83 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 MIR630-201ENST00000384957 97 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 RPL35AP4-201ENST00000412007 102 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 RNU6-182P-201ENST00000516970 105 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 MIR548AA1-201ENST00000384971 97 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 MIR548AM-201ENST00000584298 74 ntBASIC-1.63□□□□□ -2.67
SNRNP200O75643 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 RNU7-107P-201ENST00000459121 61 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 SCARNA23-201ENST00000516060 130 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 U2.18-201ENST00000622185 84 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
SNRNP200O75643 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 MIR520D-201ENST00000385002 87 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 RNU6-303P-201ENST00000517091 106 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.64□□□□□ -2.67
SNRNP200O75643 RNY4P27-201ENST00000363341 96 ntBASIC-1.65□□□□□ -2.67
SNRNP200O75643 RNU6-880P-201ENST00000384526 107 ntBASIC-1.66□□□□□ -2.67
SNRNP200O75643 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.66□□□□□ -2.67
SNRNP200O75643 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.66□□□□□ -2.68
SNRNP200O75643 RNU7-120P-201ENST00000459334 63 ntBASIC-1.66□□□□□ -2.68
SNRNP200O75643 RNU7-151P-201ENST00000516930 53 ntBASIC-1.66□□□□□ -2.68
SNRNP200O75643 RNU6-645P-201ENST00000364649 106 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 RNU7-153P-201ENST00000516455 62 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 RNU6-388P-201ENST00000517012 105 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 RNU6-389P-201ENST00000517048 105 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 RNU6-247P-201ENST00000362636 107 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.67□□□□□ -2.68
SNRNP200O75643 SNORA8.1-201ENST00000384250 140 ntBASIC-1.68□□□□□ -2.68
SNRNP200O75643 MT-TG-201ENST00000387429 68 ntBASIC-1.68□□□□□ -2.68
SNRNP200O75643 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.68□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms