Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 U6.96-201ENST00000636425 70 ntBASIC-0.07□□□□□ -2.42
KDM1AO60341 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
KDM1AO60341 MIR6773-201ENST00000612812 74 ntBASIC-0.08□□□□□ -2.42
KDM1AO60341 RNU6-502P-201ENST00000362419 108 ntBASIC-0.09□□□□□ -2.42
KDM1AO60341 SNORD45.1-201ENST00000363181 77 ntBASIC-0.09□□□□□ -2.42
KDM1AO60341 SNORA33.1-201ENST00000364957 130 ntBASIC-0.09□□□□□ -2.42
KDM1AO60341 MIR521-2-201ENST00000384818 87 ntBASIC-0.09□□□□□ -2.42
KDM1AO60341 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.09□□□□□ -2.42
KDM1AO60341 AC244250.2-201ENST00000418731 148 ntBASIC-0.1□□□□□ -2.43
KDM1AO60341 MIR664A-201ENST00000626086 82 ntBASIC-0.1□□□□□ -2.43
KDM1AO60341 RNU6-70P-201ENST00000516438 60 ntBASIC-0.11□□□□□ -2.43
KDM1AO60341 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.11□□□□□ -2.43
KDM1AO60341 RNA5SP395-201ENST00000516567 118 ntBASIC-0.11□□□□□ -2.43
KDM1AO60341 U7.4-201ENST00000614961 63 ntBASIC-0.11□□□□□ -2.43
KDM1AO60341 MIR1295B-201ENST00000636144 60 ntBASIC-0.11□□□□□ -2.43
KDM1AO60341 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
KDM1AO60341 RNU6-455P-201ENST00000384681 107 ntBASIC-0.12□□□□□ -2.43
KDM1AO60341 MIR8053-201ENST00000613344 75 ntBASIC-0.12□□□□□ -2.43
KDM1AO60341 MIR2909-201ENST00000617113 69 ntBASIC-0.12□□□□□ -2.43
KDM1AO60341 SNORD49B-201ENST00000365172 72 ntBASIC-0.13□□□□□ -2.43
KDM1AO60341 MIR9-2-201ENST00000384838 87 ntBASIC-0.14□□□□□ -2.43
KDM1AO60341 MIRLET7B-201ENST00000385140 83 ntBASIC-0.14□□□□□ -2.43
KDM1AO60341 RNU6-337P-201ENST00000391243 106 ntBASIC-0.14□□□□□ -2.43
KDM1AO60341 MIR3134-201ENST00000579433 74 ntBASIC-0.14□□□□□ -2.43
KDM1AO60341 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.15□□□□□ -2.43
KDM1AO60341 RNU6-645P-201ENST00000364649 106 ntBASIC-0.15□□□□□ -2.43
KDM1AO60341 RNU6-900P-201ENST00000384498 102 ntBASIC-0.15□□□□□ -2.43
KDM1AO60341 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.15□□□□□ -2.43
KDM1AO60341 RNA5SP257-201ENST00000363023 116 ntBASIC-0.16□□□□□ -2.44
KDM1AO60341 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
KDM1AO60341 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.16□□□□□ -2.44
KDM1AO60341 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.16□□□□□ -2.44
KDM1AO60341 RNU6-656P-201ENST00000516785 107 ntBASIC-0.16□□□□□ -2.44
KDM1AO60341 SNORD115-22-201ENST00000364456 82 ntBASIC-0.17□□□□□ -2.44
KDM1AO60341 RNU6-587P-201ENST00000391282 106 ntBASIC-0.17□□□□□ -2.44
KDM1AO60341 RNU7-55P-201ENST00000459426 62 ntBASIC-0.17□□□□□ -2.44
KDM1AO60341 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.17□□□□□ -2.44
KDM1AO60341 MIR655-201ENST00000362159 97 ntBASIC-0.18□□□□□ -2.44
KDM1AO60341 SNORA18.1-201ENST00000363418 128 ntBASIC-0.18□□□□□ -2.44
KDM1AO60341 RNU6-411P-201ENST00000384451 107 ntBASIC-0.18□□□□□ -2.44
KDM1AO60341 MIR154-201ENST00000385243 84 ntBASIC-0.18□□□□□ -2.44
KDM1AO60341 AC090617.8-201ENST00000623339 167 ntBASIC-0.18□□□□□ -2.44
KDM1AO60341 RNU6-982P-201ENST00000516216 102 ntBASIC-0.19□□□□□ -2.44
KDM1AO60341 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.19□□□□□ -2.44
KDM1AO60341 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
KDM1AO60341 SNORD45A-201ENST00000384512 84 ntBASIC-0.2□□□□□ -2.44
KDM1AO60341 SNORD113.1-201ENST00000363280 73 ntBASIC-0.22□□□□□ -2.44
KDM1AO60341 RNU6-973P-201ENST00000364690 107 ntBASIC-0.22□□□□□ -2.44
KDM1AO60341 MTND4LP1-201ENST00000446263 157 ntBASIC-0.22□□□□□ -2.44
KDM1AO60341 RNU6-687P-201ENST00000516443 89 ntBASIC-0.22□□□□□ -2.44
KDM1AO60341 RNU6-881P-201ENST00000516813 102 ntBASIC-0.22□□□□□ -2.44
KDM1AO60341 CYP3A54P-201ENST00000566950 75 ntBASIC-0.22□□□□□ -2.44
KDM1AO60341 SNORD115-23-201ENST00000364461 82 ntBASIC-0.23□□□□□ -2.45
KDM1AO60341 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
KDM1AO60341 MIR4263-201ENST00000584745 83 ntBASIC-0.23□□□□□ -2.45
KDM1AO60341 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
KDM1AO60341 AL391099.1-201ENST00000624635 187 ntBASIC-0.23□□□□□ -2.45
KDM1AO60341 snoR1.1-201ENST00000628177 80 ntBASIC-0.23□□□□□ -2.45
KDM1AO60341 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.24□□□□□ -2.45
KDM1AO60341 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.24□□□□□ -2.45
KDM1AO60341 MIR1255B2-201ENST00000408618 67 ntBASIC-0.24□□□□□ -2.45
KDM1AO60341 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.24□□□□□ -2.45
KDM1AO60341 RNU6-901P-201ENST00000384593 106 ntBASIC-0.25□□□□□ -2.45
KDM1AO60341 MIR329-2-201ENST00000385029 84 ntBASIC-0.25□□□□□ -2.45
KDM1AO60341 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.25□□□□□ -2.45
KDM1AO60341 uc_338.36-201ENST00000622331 158 ntBASIC-0.25□□□□□ -2.45
KDM1AO60341 RNU6-895P-201ENST00000384125 103 ntBASIC-0.26□□□□□ -2.45
KDM1AO60341 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.26□□□□□ -2.45
KDM1AO60341 RNA5SP470-201ENST00000516463 106 ntBASIC-0.26□□□□□ -2.45
KDM1AO60341 SNORD56B-201ENST00000384713 71 ntBASIC-0.27□□□□□ -2.45
KDM1AO60341 MIR889-201ENST00000401280 79 ntBASIC-0.27□□□□□ -2.45
KDM1AO60341 RNA5SP285-201ENST00000516619 119 ntBASIC-0.27□□□□□ -2.45
KDM1AO60341 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.27□□□□□ -2.45
KDM1AO60341 MIR4432-201ENST00000581823 84 ntBASIC-0.27□□□□□ -2.45
KDM1AO60341 SNORD115-31-201ENST00000365318 82 ntBASIC-0.28□□□□□ -2.45
KDM1AO60341 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
KDM1AO60341 U2.7-201ENST00000619197 100 ntBASIC-0.28□□□□□ -2.45
KDM1AO60341 MIR4662A-201ENST00000637499 67 ntBASIC-0.28□□□□□ -2.45
KDM1AO60341 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.29□□□□□ -2.46
KDM1AO60341 RNU6-668P-201ENST00000364180 107 ntBASIC-0.29□□□□□ -2.46
KDM1AO60341 MIR548C-201ENST00000384815 97 ntBASIC-0.29□□□□□ -2.46
KDM1AO60341 AC096531.1-201ENST00000419107 107 ntBASIC-0.29□□□□□ -2.46
KDM1AO60341 AL021921.1-201ENST00000442774 93 ntBASIC-0.29□□□□□ -2.46
KDM1AO60341 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
KDM1AO60341 RNU6-634P-201ENST00000459134 106 ntBASIC-0.3□□□□□ -2.46
KDM1AO60341 RNU6-518P-201ENST00000516056 96 ntBASIC-0.3□□□□□ -2.46
KDM1AO60341 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.3□□□□□ -2.46
KDM1AO60341 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.31□□□□□ -2.46
KDM1AO60341 RNU7-154P-201ENST00000516194 62 ntBASIC-0.31□□□□□ -2.46
KDM1AO60341 RNA5SP66-201ENST00000517178 101 ntBASIC-0.31□□□□□ -2.46
KDM1AO60341 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
KDM1AO60341 RNU6-776P-201ENST00000364403 104 ntBASIC-0.32□□□□□ -2.46
KDM1AO60341 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.32□□□□□ -2.46
KDM1AO60341 AL445193.1-201ENST00000441183 141 ntBASIC-0.32□□□□□ -2.46
KDM1AO60341 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.33□□□□□ -2.46
KDM1AO60341 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
KDM1AO60341 RNA5SP300-201ENST00000391197 107 ntBASIC-0.33□□□□□ -2.46
KDM1AO60341 RNU6-871P-201ENST00000516122 100 ntBASIC-0.33□□□□□ -2.46
KDM1AO60341 RNU6-523P-201ENST00000516304 54 ntBASIC-0.33□□□□□ -2.46
KDM1AO60341 AL353803.5-201ENST00000599815 141 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms