Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.18□□□□□ -2.76
CHD2O14647 RNU6-682P-201ENST00000363843 106 ntBASIC-2.18□□□□□ -2.76
CHD2O14647 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.18□□□□□ -2.76
CHD2O14647 MIR1236-201ENST00000408340 102 ntBASIC-2.19□□□□□ -2.76
CHD2O14647 MIR548X2-201ENST00000579776 100 ntBASIC-2.19□□□□□ -2.76
CHD2O14647 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.19□□□□□ -2.76
CHD2O14647 RNU6-752P-201ENST00000516376 102 ntBASIC-2.19□□□□□ -2.76
CHD2O14647 MIR4777-201ENST00000583710 86 ntBASIC-2.19□□□□□ -2.76
CHD2O14647 MIR664B-201ENST00000626756 61 ntBASIC-2.19□□□□□ -2.76
CHD2O14647 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
CHD2O14647 RNU6-797P-201ENST00000363101 109 ntBASIC-2.2□□□□□ -2.76
CHD2O14647 AL158147.1-201ENST00000443970 75 ntBASIC-2.2□□□□□ -2.76
CHD2O14647 RNY4-201ENST00000516507 96 ntBASIC-2.2□□□□□ -2.76
CHD2O14647 RNU6-656P-201ENST00000516785 107 ntBASIC-2.2□□□□□ -2.76
CHD2O14647 MIR4796-201ENST00000580742 81 ntBASIC-2.2□□□□□ -2.76
CHD2O14647 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.21□□□□□ -2.76
CHD2O14647 RNU6-79P-201ENST00000362511 107 ntBASIC-2.21□□□□□ -2.76
CHD2O14647 RNU6-394P-201ENST00000410735 107 ntBASIC-2.21□□□□□ -2.76
CHD2O14647 AC108019.1-201ENST00000512540 175 ntBASIC-2.21□□□□□ -2.76
CHD2O14647 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.22□□□□□ -2.77
CHD2O14647 MIR568-201ENST00000385036 95 ntBASIC-2.22□□□□□ -2.77
CHD2O14647 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.22□□□□□ -2.77
CHD2O14647 MIR3139-201ENST00000579145 76 ntBASIC-2.22□□□□□ -2.77
CHD2O14647 SNORD116-10-201ENST00000363791 102 ntBASIC-2.23□□□□□ -2.77
CHD2O14647 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.23□□□□□ -2.77
CHD2O14647 MIR548A3-201ENST00000385297 97 ntBASIC-2.23□□□□□ -2.77
CHD2O14647 RNU6-772P-201ENST00000516042 105 ntBASIC-2.23□□□□□ -2.77
CHD2O14647 RNU6-168P-201ENST00000516189 101 ntBASIC-2.23□□□□□ -2.77
CHD2O14647 RNU6-246P-201ENST00000384702 107 ntBASIC-2.24□□□□□ -2.77
CHD2O14647 RNU6-695P-201ENST00000391157 104 ntBASIC-2.24□□□□□ -2.77
CHD2O14647 AC090616.4-201ENST00000448026 115 ntBASIC-2.24□□□□□ -2.77
CHD2O14647 MIR548Q-201ENST00000408404 100 ntBASIC-2.24□□□□□ -2.77
CHD2O14647 RNU6-537P-201ENST00000517277 103 ntBASIC-2.24□□□□□ -2.77
CHD2O14647 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.25□□□□□ -2.77
CHD2O14647 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.25□□□□□ -2.77
CHD2O14647 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.25□□□□□ -2.77
CHD2O14647 AL353621.2-201ENST00000605340 133 ntBASIC-2.25□□□□□ -2.77
CHD2O14647 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.26□□□□□ -2.77
CHD2O14647 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.26□□□□□ -2.77
CHD2O14647 RNU6-696P-201ENST00000390834 107 ntBASIC-2.26□□□□□ -2.77
CHD2O14647 AL035461.1-201ENST00000421490 332 ntBASIC-2.26□□□□□ -2.77
CHD2O14647 MIR23C-201ENST00000579846 100 ntBASIC-2.26□□□□□ -2.77
CHD2O14647 U6.81-201ENST00000612550 106 ntBASIC-2.26□□□□□ -2.77
CHD2O14647 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.27□□□□□ -2.77
CHD2O14647 RNU6-400P-201ENST00000391173 106 ntBASIC-2.27□□□□□ -2.77
CHD2O14647 RNU6-340P-201ENST00000364005 107 ntBASIC-2.28□□□□□ -2.77
CHD2O14647 RNU6-518P-201ENST00000516056 96 ntBASIC-2.28□□□□□ -2.77
CHD2O14647 SCARNA23-201ENST00000516060 130 ntBASIC-2.28□□□□□ -2.77
CHD2O14647 MIR4756-201ENST00000577874 78 ntBASIC-2.28□□□□□ -2.77
CHD2O14647 MIR3675-201ENST00000583661 73 ntBASIC-2.28□□□□□ -2.77
CHD2O14647 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.28□□□□□ -2.78
CHD2O14647 MIR3144-201ENST00000579460 79 ntBASIC-2.28□□□□□ -2.78
CHD2O14647 AL035470.1-201ENST00000622571 220 ntBASIC-2.28□□□□□ -2.78
CHD2O14647 RNU6-795P-201ENST00000516323 103 ntBASIC-2.29□□□□□ -2.78
CHD2O14647 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.3□□□□□ -2.78
CHD2O14647 MIR487B-201ENST00000385021 84 ntBASIC-2.3□□□□□ -2.78
CHD2O14647 RNU6-426P-201ENST00000516464 97 ntBASIC-2.3□□□□□ -2.78
CHD2O14647 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.31□□□□□ -2.78
CHD2O14647 SNORD90-201ENST00000391145 111 ntBASIC-2.31□□□□□ -2.78
CHD2O14647 AL157777.2-201ENST00000258070 137 ntBASIC-2.31□□□□□ -2.78
CHD2O14647 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.31□□□□□ -2.78
CHD2O14647 SNORD116-18-201ENST00000383961 92 ntBASIC-2.31□□□□□ -2.78
CHD2O14647 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.32□□□□□ -2.78
CHD2O14647 AC012531.4-201ENST00000616509 177 ntBASIC-2.32□□□□□ -2.78
CHD2O14647 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 AL450471.1-201ENST00000447509 127 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 RNU7-61P-201ENST00000515897 61 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 RNU6-624P-201ENST00000363411 107 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 MTND4LP9-201ENST00000427694 174 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 AC004792.1-201ENST00000614523 137 ntBASIC-2.33□□□□□ -2.78
CHD2O14647 MIR429-201ENST00000362106 83 ntBASIC-2.34□□□□□ -2.78
CHD2O14647 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.34□□□□□ -2.78
CHD2O14647 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.34□□□□□ -2.78
CHD2O14647 RNU6-807P-201ENST00000516805 107 ntBASIC-2.35□□□□□ -2.79
CHD2O14647 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.35□□□□□ -2.79
CHD2O14647 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.35□□□□□ -2.79
CHD2O14647 MIR519C-201ENST00000385053 87 ntBASIC-2.35□□□□□ -2.79
CHD2O14647 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.35□□□□□ -2.79
CHD2O14647 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.35□□□□□ -2.79
CHD2O14647 U2.7-201ENST00000619197 100 ntBASIC-2.35□□□□□ -2.79
CHD2O14647 RNA5SP405-201ENST00000363059 114 ntBASIC-2.36□□□□□ -2.79
CHD2O14647 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.36□□□□□ -2.79
CHD2O14647 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.37□□□□□ -2.79
CHD2O14647 SNORA40-201ENST00000388090 126 ntBASIC-2.38□□□□□ -2.79
CHD2O14647 RNU6-841P-201ENST00000383872 107 ntBASIC-2.38□□□□□ -2.79
CHD2O14647 SNORD77.2-201ENST00000391045 68 ntBASIC-2.38□□□□□ -2.79
CHD2O14647 SNORA63-201ENST00000363450 132 ntBASIC-2.39□□□□□ -2.79
CHD2O14647 RNU6-630P-201ENST00000391258 106 ntBASIC-2.39□□□□□ -2.79
CHD2O14647 SNORD115-37-201ENST00000363768 82 ntBASIC-2.4□□□□□ -2.79
CHD2O14647 RNU6-379P-201ENST00000363813 104 ntBASIC-2.4□□□□□ -2.79
CHD2O14647 RNU6-458P-201ENST00000384179 107 ntBASIC-2.4□□□□□ -2.79
CHD2O14647 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
CHD2O14647 RPL35AP4-201ENST00000412007 102 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 298.2 ms