Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CGB1A6NKQ9 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
CGB1A6NKQ9 RNU7-129P-201ENST00000516128 62 ntBASIC0.45□□□□□ -2.34
CGB1A6NKQ9 MIR6513-201ENST00000621188 64 ntBASIC0.45□□□□□ -2.34
CGB1A6NKQ9 AL021921.1-201ENST00000442774 93 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 RNU6-175P-201ENST00000516896 107 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 MIR466-201ENST00000580653 84 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 MIR499B-201ENST00000636498 73 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 AC010487.4-201ENST00000637027 61 ntBASIC0.44□□□□□ -2.34
CGB1A6NKQ9 MIR876-201ENST00000401147 81 ntBASIC0.43□□□□□ -2.34
CGB1A6NKQ9 RNU6-122P-201ENST00000516818 107 ntBASIC0.43□□□□□ -2.34
CGB1A6NKQ9 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 SNORA9.1-201ENST00000362412 131 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 Y_RNA.246-201ENST00000364495 108 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 RNU6-1036P-201ENST00000383959 104 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 SNORA49-201ENST00000386157 136 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 SNORA75.1-201ENST00000391130 148 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 MIR1255B2-201ENST00000408618 67 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 RNU6-518P-201ENST00000516056 96 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 MIR3925-201ENST00000584674 77 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 MIR6773-201ENST00000612812 74 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 U4.4-201ENST00000620626 117 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 AC090617.8-201ENST00000623339 167 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
CGB1A6NKQ9 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
CGB1A6NKQ9 SNORD60.1-201ENST00000362451 73 ntBASIC0.4□□□□□ -2.35
CGB1A6NKQ9 SNORD115-25-201ENST00000362619 82 ntBASIC0.4□□□□□ -2.35
CGB1A6NKQ9 RNU6-337P-201ENST00000391243 106 ntBASIC0.4□□□□□ -2.35
CGB1A6NKQ9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
CGB1A6NKQ9 RN7SL660P-201ENST00000614852 299 ntBASIC0.4□□□□□ -2.35
CGB1A6NKQ9 MIR103A1-201ENST00000362165 78 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 MIR633-201ENST00000384821 98 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 MIR106A-201ENST00000384870 81 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 RNA5SP470-201ENST00000516463 106 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.39□□□□□ -2.35
CGB1A6NKQ9 RNU6-502P-201ENST00000362419 108 ntBASIC0.38□□□□□ -2.35
CGB1A6NKQ9 MIR519A2-201ENST00000384990 87 ntBASIC0.38□□□□□ -2.35
CGB1A6NKQ9 MIRLET7B-201ENST00000385140 83 ntBASIC0.38□□□□□ -2.35
CGB1A6NKQ9 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
CGB1A6NKQ9 MTND4LP19-201ENST00000403051 166 ntBASIC0.38□□□□□ -2.35
CGB1A6NKQ9 AC079150.2-201ENST00000443733 78 ntBASIC0.38□□□□□ -2.35
CGB1A6NKQ9 RNU6-1079P-201ENST00000362861 110 ntBASIC0.37□□□□□ -2.35
CGB1A6NKQ9 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
CGB1A6NKQ9 Y_RNA.325-201ENST00000365171 122 ntBASIC0.37□□□□□ -2.35
CGB1A6NKQ9 RNU7-154P-201ENST00000516194 62 ntBASIC0.37□□□□□ -2.35
CGB1A6NKQ9 MIR3938-201ENST00000582157 103 ntBASIC0.37□□□□□ -2.35
CGB1A6NKQ9 Y_RNA.74-201ENST00000362911 99 ntBASIC0.36□□□□□ -2.35
CGB1A6NKQ9 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CGB1A6NKQ9 RNU6-127P-201ENST00000390897 107 ntBASIC0.36□□□□□ -2.35
CGB1A6NKQ9 RNU6-782P-201ENST00000516852 104 ntBASIC0.36□□□□□ -2.35
CGB1A6NKQ9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.36□□□□□ -2.35
CGB1A6NKQ9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.35□□□□□ -2.35
CGB1A6NKQ9 RNA5SP62-201ENST00000363457 110 ntBASIC0.35□□□□□ -2.35
CGB1A6NKQ9 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
CGB1A6NKQ9 RNA5SP98-201ENST00000363158 137 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 RNU6-1246P-201ENST00000391064 107 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 MIR8087-201ENST00000612745 78 ntBASIC0.34□□□□□ -2.36
CGB1A6NKQ9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
CGB1A6NKQ9 MIR527-201ENST00000385244 85 ntBASIC0.33□□□□□ -2.36
CGB1A6NKQ9 AP000676.1-201ENST00000533307 52 ntBASIC0.33□□□□□ -2.36
CGB1A6NKQ9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
CGB1A6NKQ9 RNU6-829P-201ENST00000363700 112 ntBASIC0.32□□□□□ -2.36
CGB1A6NKQ9 SNORA41B-201ENST00000384785 128 ntBASIC0.32□□□□□ -2.36
CGB1A6NKQ9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.32□□□□□ -2.36
CGB1A6NKQ9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.32□□□□□ -2.36
CGB1A6NKQ9 MIR4711-201ENST00000578274 70 ntBASIC0.32□□□□□ -2.36
CGB1A6NKQ9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
CGB1A6NKQ9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.31□□□□□ -2.36
CGB1A6NKQ9 RNU6-614P-201ENST00000384369 107 ntBASIC0.31□□□□□ -2.36
CGB1A6NKQ9 MIR643-201ENST00000385267 97 ntBASIC0.31□□□□□ -2.36
CGB1A6NKQ9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.31□□□□□ -2.36
CGB1A6NKQ9 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CGB1A6NKQ9 U6.59-201ENST00000615686 107 ntBASIC0.31□□□□□ -2.36
CGB1A6NKQ9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.31□□□□□ -2.36
CGB1A6NKQ9 MIR429-201ENST00000362106 83 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 Y_RNA.282-201ENST00000364793 102 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 SNORD116-16-201ENST00000384533 92 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 RNU6-987P-201ENST00000384759 104 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 MIR892B-201ENST00000401279 77 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 MIR6514-201ENST00000622549 70 ntBASIC0.3□□□□□ -2.36
CGB1A6NKQ9 SNORD115-23-201ENST00000364461 82 ntBASIC0.29□□□□□ -2.36
CGB1A6NKQ9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
CGB1A6NKQ9 CR383656.4-201ENST00000546909 122 ntBASIC0.29□□□□□ -2.36
CGB1A6NKQ9 AL353803.5-201ENST00000599815 141 ntBASIC0.29□□□□□ -2.36
CGB1A6NKQ9 snoR1.1-201ENST00000628177 80 ntBASIC0.29□□□□□ -2.36
CGB1A6NKQ9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
CGB1A6NKQ9 Y_RNA.236-201ENST00000364427 111 ntBASIC0.28□□□□□ -2.36
CGB1A6NKQ9 RNU6-520P-201ENST00000384717 104 ntBASIC0.28□□□□□ -2.36
CGB1A6NKQ9 RNU4-37P-201ENST00000410214 84 ntBASIC0.28□□□□□ -2.36
CGB1A6NKQ9 RNU7-119P-201ENST00000459279 63 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms