Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 SNORA19-201ENST00000384737 128 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 MT-TR-201ENST00000387439 65 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 MTATP6P29-201ENST00000415057 132 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 AC021146.6-201ENST00000514659 117 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 RNU6-109P-201ENST00000516364 107 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 RNU6-184P-201ENST00000516514 107 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 U6.81-201ENST00000612550 106 ntBASIC-0.64□□□□□ -2.51
CDH9Q9ULB4 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.65□□□□□ -2.51
CDH9Q9ULB4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.65□□□□□ -2.51
CDH9Q9ULB4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.65□□□□□ -2.51
CDH9Q9ULB4 RNU6-260P-201ENST00000384092 107 ntBASIC-0.65□□□□□ -2.51
CDH9Q9ULB4 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.65□□□□□ -2.51
CDH9Q9ULB4 AL365222.1-201ENST00000614661 98 ntBASIC-0.65□□□□□ -2.51
CDH9Q9ULB4 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.66□□□□□ -2.52
CDH9Q9ULB4 MIR4796-201ENST00000580742 81 ntBASIC-0.66□□□□□ -2.52
CDH9Q9ULB4 MIR3657-201ENST00000584818 117 ntBASIC-0.66□□□□□ -2.52
CDH9Q9ULB4 AC006254.2-201ENST00000603259 279 ntBASIC-0.66□□□□□ -2.52
CDH9Q9ULB4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.67□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
CDH9Q9ULB4 MIR203A-201ENST00000384836 110 ntBASIC-0.67□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.67□□□□□ -2.52
CDH9Q9ULB4 RNU7-153P-201ENST00000516455 62 ntBASIC-0.67□□□□□ -2.52
CDH9Q9ULB4 RNU6-589P-201ENST00000516485 107 ntBASIC-0.67□□□□□ -2.52
CDH9Q9ULB4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 AP000533.3-201ENST00000447704 118 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 MIR3681-201ENST00000580089 72 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 MIR6129-201ENST00000616087 109 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 U7.3-201ENST00000616123 62 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 U6.96-201ENST00000636425 70 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 MIR4773-1-201ENST00000637203 78 ntBASIC-0.68□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 SNORA2.1-201ENST00000363089 137 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 MIR517B-201ENST00000385102 67 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 MIR1302-5-201ENST00000408164 150 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 AC008267.6-201ENST00000441664 139 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 AC022137.1-201ENST00000483735 151 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 RNU6-162P-201ENST00000516228 103 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 RNA5SP147-201ENST00000516493 109 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 MIR6509-201ENST00000614603 85 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 MIR6888-201ENST00000621977 67 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 snoR1.1-201ENST00000628177 80 ntBASIC-0.69□□□□□ -2.52
CDH9Q9ULB4 RNU5F-1-201ENST00000362507 117 ntBASIC-0.7□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.7□□□□□ -2.52
CDH9Q9ULB4 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.7□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.7□□□□□ -2.52
CDH9Q9ULB4 AL353803.5-201ENST00000599815 141 ntBASIC-0.7□□□□□ -2.52
CDH9Q9ULB4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.7□□□□□ -2.52
CDH9Q9ULB4 RNU6-208P-201ENST00000362431 107 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 RNU6-431P-201ENST00000383874 107 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 MIR1236-201ENST00000408340 102 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 MIR3668-201ENST00000582138 75 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 AL445584.3-201ENST00000617173 78 ntBASIC-0.71□□□□□ -2.52
CDH9Q9ULB4 SNORA62.4-201ENST00000365504 151 ntBASIC-0.72□□□□□ -2.52
CDH9Q9ULB4 RNU6-158P-201ENST00000517104 100 ntBASIC-0.72□□□□□ -2.52
CDH9Q9ULB4 RNU6-766P-201ENST00000362478 107 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 MIR147A-201ENST00000385079 72 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 MIR124-2-201ENST00000385081 109 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 MIR1255B2-201ENST00000408618 67 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 MTATP8P2-201ENST00000435212 202 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 AL691482.2-201ENST00000457453 84 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 HAR1A.1-201ENST00000459583 118 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 CYP3A54P-201ENST00000566950 75 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 MIR6739-201ENST00000622461 75 ntBASIC-0.73□□□□□ -2.53
CDH9Q9ULB4 RNU6-834P-201ENST00000362367 110 ntBASIC-0.74□□□□□ -2.53
CDH9Q9ULB4 MIR521-2-201ENST00000384818 87 ntBASIC-0.74□□□□□ -2.53
CDH9Q9ULB4 MT-TQ-201ENST00000387372 72 ntBASIC-0.74□□□□□ -2.53
CDH9Q9ULB4 AL500527.2-201ENST00000454105 95 ntBASIC-0.74□□□□□ -2.53
CDH9Q9ULB4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.74□□□□□ -2.53
CDH9Q9ULB4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.75□□□□□ -2.53
CDH9Q9ULB4 RNU6-340P-201ENST00000364005 107 ntBASIC-0.75□□□□□ -2.53
CDH9Q9ULB4 RNU6-497P-201ENST00000365316 104 ntBASIC-0.75□□□□□ -2.53
CDH9Q9ULB4 RNU6-22P-201ENST00000384355 107 ntBASIC-0.75□□□□□ -2.53
CDH9Q9ULB4 RNA5SP476-201ENST00000516613 103 ntBASIC-0.75□□□□□ -2.53
CDH9Q9ULB4 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.75□□□□□ -2.53
CDH9Q9ULB4 SNORD64-201ENST00000386683 67 ntBASIC-0.76□□□□□ -2.53
CDH9Q9ULB4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.76□□□□□ -2.53
CDH9Q9ULB4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.76□□□□□ -2.53
CDH9Q9ULB4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.77□□□□□ -2.53
CDH9Q9ULB4 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.77□□□□□ -2.53
CDH9Q9ULB4 RNU6-752P-201ENST00000516376 102 ntBASIC-0.77□□□□□ -2.53
CDH9Q9ULB4 RNU6-633P-201ENST00000362612 103 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms