Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 SNORD99-201ENST00000408612 74 ntBASIC1.54□□□□□ -2.16
TSR3Q9UJK0 RNU6-986P-201ENST00000363133 102 ntBASIC1.53□□□□□ -2.16
TSR3Q9UJK0 RNY1P8-201ENST00000383970 114 ntBASIC1.53□□□□□ -2.16
TSR3Q9UJK0 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
TSR3Q9UJK0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.53□□□□□ -2.16
TSR3Q9UJK0 RNU1-17P-201ENST00000363022 152 ntBASIC1.52□□□□□ -2.17
TSR3Q9UJK0 RNU4-45P-201ENST00000365469 141 ntBASIC1.52□□□□□ -2.17
TSR3Q9UJK0 SNORA49-201ENST00000386157 136 ntBASIC1.52□□□□□ -2.17
TSR3Q9UJK0 RNU6-724P-201ENST00000390958 105 ntBASIC1.52□□□□□ -2.17
TSR3Q9UJK0 RNU7-160P-201ENST00000516660 62 ntBASIC1.52□□□□□ -2.17
TSR3Q9UJK0 RNU7-151P-201ENST00000516930 53 ntBASIC1.52□□□□□ -2.17
TSR3Q9UJK0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
TSR3Q9UJK0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.51□□□□□ -2.17
TSR3Q9UJK0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 RNU6-598P-201ENST00000364017 105 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 RNA5SP99-201ENST00000364020 114 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 SNORD114-29-201ENST00000364819 70 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 RNA5SP255-201ENST00000516370 107 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 RNU1-29P-201ENST00000606574 126 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 U2.18-201ENST00000622185 84 ntBASIC1.51□□□□□ -2.17
TSR3Q9UJK0 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
TSR3Q9UJK0 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
TSR3Q9UJK0 MIR5706-201ENST00000579841 80 ntBASIC1.5□□□□□ -2.17
TSR3Q9UJK0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
TSR3Q9UJK0 MIRLET7B-201ENST00000385140 83 ntBASIC1.49□□□□□ -2.17
TSR3Q9UJK0 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
TSR3Q9UJK0 RNA5SP458-201ENST00000516188 119 ntBASIC1.49□□□□□ -2.17
TSR3Q9UJK0 MIR4303-201ENST00000581299 66 ntBASIC1.49□□□□□ -2.17
TSR3Q9UJK0 SNORD114-24-201ENST00000365029 72 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 RNU7-188P-201ENST00000517063 64 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 MIR548AL-201ENST00000578416 97 ntBASIC1.48□□□□□ -2.17
TSR3Q9UJK0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.47□□□□□ -2.17
TSR3Q9UJK0 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
TSR3Q9UJK0 SNORA17.3-201ENST00000391159 129 ntBASIC1.46□□□□□ -2.18
TSR3Q9UJK0 RNU6-782P-201ENST00000516852 104 ntBASIC1.46□□□□□ -2.18
TSR3Q9UJK0 MIR329-2-201ENST00000385029 84 ntBASIC1.45□□□□□ -2.18
TSR3Q9UJK0 RNA5SP222-201ENST00000411039 105 ntBASIC1.45□□□□□ -2.18
TSR3Q9UJK0 AC069271.1-201ENST00000445577 156 ntBASIC1.45□□□□□ -2.18
TSR3Q9UJK0 RNU6-502P-201ENST00000362419 108 ntBASIC1.44□□□□□ -2.18
TSR3Q9UJK0 RNU6-175P-201ENST00000516896 107 ntBASIC1.44□□□□□ -2.18
TSR3Q9UJK0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
TSR3Q9UJK0 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
TSR3Q9UJK0 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
TSR3Q9UJK0 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
TSR3Q9UJK0 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
TSR3Q9UJK0 RNA5SP404-201ENST00000517118 132 ntBASIC1.41□□□□□ -2.18
TSR3Q9UJK0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
TSR3Q9UJK0 RNA5SP517-201ENST00000364724 117 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 RNU6-828P-201ENST00000364876 107 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 RNU6-995P-201ENST00000391244 107 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 AL451105.1-201ENST00000450005 189 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 AL353803.5-201ENST00000599815 141 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
TSR3Q9UJK0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
TSR3Q9UJK0 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
TSR3Q9UJK0 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
TSR3Q9UJK0 RNU6-1262P-201ENST00000516217 96 ntBASIC1.39□□□□□ -2.19
TSR3Q9UJK0 U7.6-201ENST00000610841 64 ntBASIC1.39□□□□□ -2.19
TSR3Q9UJK0 MIR548AA1-201ENST00000384971 97 ntBASIC1.38□□□□□ -2.19
TSR3Q9UJK0 RNU6-696P-201ENST00000390834 107 ntBASIC1.38□□□□□ -2.19
TSR3Q9UJK0 SNORA2A-201ENST00000383885 135 ntBASIC1.37□□□□□ -2.19
TSR3Q9UJK0 MIR125B1-201ENST00000385236 88 ntBASIC1.37□□□□□ -2.19
TSR3Q9UJK0 SNORA67.5-201ENST00000391036 107 ntBASIC1.37□□□□□ -2.19
TSR3Q9UJK0 AC108667.1-201ENST00000428618 249 ntBASIC1.37□□□□□ -2.19
TSR3Q9UJK0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.37□□□□□ -2.19
TSR3Q9UJK0 RNU6-229P-201ENST00000516614 102 ntBASIC1.37□□□□□ -2.19
TSR3Q9UJK0 SNORA25.18-201ENST00000607153 114 ntBASIC1.37□□□□□ -2.19
TSR3Q9UJK0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TSR3Q9UJK0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.36□□□□□ -2.19
TSR3Q9UJK0 RNU6-1204P-201ENST00000363948 107 ntBASIC1.35□□□□□ -2.19
TSR3Q9UJK0 RNU6-945P-201ENST00000383947 107 ntBASIC1.34□□□□□ -2.19
TSR3Q9UJK0 SNORA36.2-201ENST00000384004 127 ntBASIC1.34□□□□□ -2.19
TSR3Q9UJK0 RNU6-1267P-201ENST00000410747 107 ntBASIC1.34□□□□□ -2.19
TSR3Q9UJK0 MIR4677-201ENST00000584153 80 ntBASIC1.34□□□□□ -2.19
TSR3Q9UJK0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 ACA64.5-201ENST00000516207 127 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 MIR4432-201ENST00000581823 84 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 AC108676.2-201ENST00000605225 163 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 AC084368.1-201ENST00000620935 65 ntBASIC1.33□□□□□ -2.2
TSR3Q9UJK0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
TSR3Q9UJK0 MIR378A-201ENST00000362177 66 ntBASIC1.32□□□□□ -2.2
TSR3Q9UJK0 AL603825.1-201ENST00000438481 80 ntBASIC1.32□□□□□ -2.2
TSR3Q9UJK0 AL353765.1-201ENST00000605514 183 ntBASIC1.32□□□□□ -2.2
TSR3Q9UJK0 Y_RNA.139-201ENST00000363464 102 ntBASIC1.31□□□□□ -2.2
TSR3Q9UJK0 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
TSR3Q9UJK0 MIR501-201ENST00000390204 84 ntBASIC1.3□□□□□ -2.2
TSR3Q9UJK0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
TSR3Q9UJK0 RN7SL660P-201ENST00000614852 299 ntBASIC1.3□□□□□ -2.2
TSR3Q9UJK0 RNU6-822P-201ENST00000362707 106 ntBASIC1.29□□□□□ -2.2
TSR3Q9UJK0 SNORD118-201ENST00000363593 134 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms