Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 SNORD99-201ENST00000408612 74 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR548J-201ENST00000408833 112 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR4752-201ENST00000579672 72 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR7107-201ENST00000611489 80 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 SNORA70.25-201ENST00000612741 95 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR6788-201ENST00000618842 66 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 RNU6-1312P-201ENST00000362425 108 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 SNORA63.6-201ENST00000364921 119 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 RNU6-1184P-201ENST00000384588 108 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 RNA5SP268-201ENST00000516828 124 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 AC011195.1-201ENST00000578177 177 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 AC090617.8-201ENST00000623339 167 ntBASIC0.96□□□□□ -2.26
SMPD4Q9NXE4 Y_RNA.325-201ENST00000365171 122 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 SNORA41B-201ENST00000384785 128 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 SNORD113-2-201ENST00000391082 72 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 SNORD110-201ENST00000408189 75 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 AC006210.1-201ENST00000424882 111 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 RNA5SP94-201ENST00000516917 108 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 MIR151B-201ENST00000584249 96 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 RNU1-29P-201ENST00000606574 126 ntBASIC0.95□□□□□ -2.26
SMPD4Q9NXE4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.94□□□□□ -2.26
SMPD4Q9NXE4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.94□□□□□ -2.26
SMPD4Q9NXE4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
SMPD4Q9NXE4 RNY1P8-201ENST00000383970 114 ntBASIC0.93□□□□□ -2.26
SMPD4Q9NXE4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.93□□□□□ -2.26
SMPD4Q9NXE4 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
SMPD4Q9NXE4 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
SMPD4Q9NXE4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SMPD4Q9NXE4 HMGN2P22-201ENST00000427588 175 ntBASIC0.92□□□□□ -2.26
SMPD4Q9NXE4 MIR6857-201ENST00000613267 93 ntBASIC0.92□□□□□ -2.26
SMPD4Q9NXE4 uc_338.10-201ENST00000621872 182 ntBASIC0.92□□□□□ -2.26
SMPD4Q9NXE4 SNORA9.1-201ENST00000362412 131 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 Y_RNA.246-201ENST00000364495 108 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 MIR516B1-201ENST00000385211 90 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 CYP3A54P-201ENST00000566950 75 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 MIR548AD-201ENST00000584780 82 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 AC022709.1-201ENST00000615967 87 ntBASIC0.91□□□□□ -2.26
SMPD4Q9NXE4 RNU6-808P-201ENST00000391233 108 ntBASIC0.9□□□□□ -2.27
SMPD4Q9NXE4 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
SMPD4Q9NXE4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.89□□□□□ -2.27
SMPD4Q9NXE4 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
SMPD4Q9NXE4 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
SMPD4Q9NXE4 MIR548AG1-201ENST00000579932 66 ntBASIC0.87□□□□□ -2.27
SMPD4Q9NXE4 U6.96-201ENST00000636425 70 ntBASIC0.87□□□□□ -2.27
SMPD4Q9NXE4 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
SMPD4Q9NXE4 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
SMPD4Q9NXE4 RNA5SP436-201ENST00000516020 115 ntBASIC0.86□□□□□ -2.27
SMPD4Q9NXE4 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
SMPD4Q9NXE4 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 RNU6-520P-201ENST00000384717 104 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 RNU4-88P-201ENST00000411220 86 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 RNU6-518P-201ENST00000516056 96 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 RNU6-231P-201ENST00000517122 103 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
SMPD4Q9NXE4 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 MIR519A2-201ENST00000384990 87 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 SNORA49-201ENST00000386157 136 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 RNU6-337P-201ENST00000391243 106 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 MIR1255B2-201ENST00000408618 67 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 AC243829.6-201ENST00000612652 106 ntBASIC0.84□□□□□ -2.27
SMPD4Q9NXE4 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
SMPD4Q9NXE4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.83□□□□□ -2.28
SMPD4Q9NXE4 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
SMPD4Q9NXE4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.83□□□□□ -2.28
SMPD4Q9NXE4 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
SMPD4Q9NXE4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
SMPD4Q9NXE4 Y_RNA.74-201ENST00000362911 99 ntBASIC0.82□□□□□ -2.28
SMPD4Q9NXE4 Y_RNA.282-201ENST00000364793 102 ntBASIC0.82□□□□□ -2.28
SMPD4Q9NXE4 SNORD116-16-201ENST00000384533 92 ntBASIC0.82□□□□□ -2.28
SMPD4Q9NXE4 AL021921.1-201ENST00000442774 93 ntBASIC0.82□□□□□ -2.28
SMPD4Q9NXE4 RNU6-980P-201ENST00000516925 103 ntBASIC0.82□□□□□ -2.28
SMPD4Q9NXE4 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
SMPD4Q9NXE4 AC244090.1-201ENST00000441884 93 ntBASIC0.81□□□□□ -2.28
SMPD4Q9NXE4 SNORA40.16-201ENST00000517238 121 ntBASIC0.81□□□□□ -2.28
SMPD4Q9NXE4 MIR20A-201ENST00000362279 71 ntBASIC0.8□□□□□ -2.28
SMPD4Q9NXE4 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
SMPD4Q9NXE4 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
SMPD4Q9NXE4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
SMPD4Q9NXE4 RNU6-753P-201ENST00000363926 107 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 Y_RNA.379-201ENST00000365653 102 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 RNU7-119P-201ENST00000459279 63 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 RNU4-54P-201ENST00000516428 129 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 RNU6-175P-201ENST00000516896 107 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 RNU7-188P-201ENST00000517063 64 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 MIR5706-201ENST00000579841 80 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 MIR6773-201ENST00000612812 74 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
SMPD4Q9NXE4 SNORD118-201ENST00000363593 134 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 239.9 ms