Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU7-134P-201ENST00000458997 64 ntBASIC-1.57□□□□□ -2.66
UPK3BQ9BT76 MIR3613-201ENST00000579844 87 ntBASIC-1.57□□□□□ -2.66
UPK3BQ9BT76 MIR4520-1-201ENST00000582609 70 ntBASIC-1.57□□□□□ -2.66
UPK3BQ9BT76 MIR3657-201ENST00000584818 117 ntBASIC-1.57□□□□□ -2.66
UPK3BQ9BT76 MIR6818-201ENST00000621576 65 ntBASIC-1.57□□□□□ -2.66
UPK3BQ9BT76 RNU5F-1-201ENST00000362507 117 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 MIR568-201ENST00000385036 95 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 SNORD90-201ENST00000391145 111 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 MIR548I1-201ENST00000408810 149 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.58□□□□□ -2.66
UPK3BQ9BT76 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.59□□□□□ -2.66
UPK3BQ9BT76 SNORD116-18-201ENST00000383961 92 ntBASIC-1.59□□□□□ -2.66
UPK3BQ9BT76 RNU6-738P-201ENST00000384531 106 ntBASIC-1.59□□□□□ -2.66
UPK3BQ9BT76 RNU7-120P-201ENST00000459334 63 ntBASIC-1.59□□□□□ -2.66
UPK3BQ9BT76 MIR6502-201ENST00000617296 76 ntBASIC-1.59□□□□□ -2.66
UPK3BQ9BT76 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 RNU6-824P-201ENST00000363724 104 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 MIR527-201ENST00000385244 85 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 MIR889-201ENST00000401280 79 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 RNU7-154P-201ENST00000516194 62 ntBASIC-1.6□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 RNY4P27-201ENST00000363341 96 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 RNU6-682P-201ENST00000363843 106 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 MTND3P2-201ENST00000438452 342 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 AL353691.2-201ENST00000443795 59 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 RNU6-732P-201ENST00000516033 103 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 AL035470.1-201ENST00000622571 220 ntBASIC-1.61□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 MIR521-2-201ENST00000384818 87 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 MIR1207-201ENST00000408249 87 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.62□□□□□ -2.67
UPK3BQ9BT76 SNORA63-201ENST00000363450 132 ntBASIC-1.63□□□□□ -2.67
UPK3BQ9BT76 AL118496.2-201ENST00000448300 230 ntBASIC-1.63□□□□□ -2.67
UPK3BQ9BT76 MIR5009-201ENST00000578736 100 ntBASIC-1.63□□□□□ -2.67
UPK3BQ9BT76 MIR519A2-201ENST00000384990 87 ntBASIC-1.64□□□□□ -2.67
UPK3BQ9BT76 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.64□□□□□ -2.67
UPK3BQ9BT76 RNA5SP272-201ENST00000516095 111 ntBASIC-1.64□□□□□ -2.67
UPK3BQ9BT76 SNORD18.1-201ENST00000363807 70 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 SNORD115-22-201ENST00000364456 82 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 RNA5SP86-201ENST00000390869 98 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 AL117351.2-201ENST00000513571 157 ntBASIC-1.65□□□□□ -2.67
UPK3BQ9BT76 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 MIR507-201ENST00000385234 94 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 RNU6-394P-201ENST00000410735 107 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 MIR4777-201ENST00000583710 86 ntBASIC-1.66□□□□□ -2.68
UPK3BQ9BT76 AL157777.2-201ENST00000258070 137 ntBASIC-1.67□□□□□ -2.68
UPK3BQ9BT76 MIR569-201ENST00000385228 96 ntBASIC-1.67□□□□□ -2.68
UPK3BQ9BT76 RNU6-518P-201ENST00000516056 96 ntBASIC-1.67□□□□□ -2.68
UPK3BQ9BT76 AL021921.1-201ENST00000442774 93 ntBASIC-1.68□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.68□□□□□ -2.68
UPK3BQ9BT76 AP001094.1-201ENST00000579805 193 ntBASIC-1.68□□□□□ -2.68
UPK3BQ9BT76 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.68□□□□□ -2.68
UPK3BQ9BT76 RNA5SP26-201ENST00000362406 119 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 RNU6-80P-201ENST00000384195 107 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 RNU6-795P-201ENST00000516323 103 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 MIR4490-201ENST00000582647 84 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 U6.81-201ENST00000612550 106 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 MIR6739-201ENST00000622461 75 ntBASIC-1.69□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.7□□□□□ -2.68
UPK3BQ9BT76 RNU6-200P-201ENST00000364743 107 ntBASIC-1.7□□□□□ -2.68
UPK3BQ9BT76 RNU6-880P-201ENST00000384526 107 ntBASIC-1.7□□□□□ -2.68
UPK3BQ9BT76 RNU6-972P-201ENST00000391208 107 ntBASIC-1.7□□□□□ -2.68
UPK3BQ9BT76 SNORA19.1-201ENST00000410656 129 ntBASIC-1.7□□□□□ -2.68
UPK3BQ9BT76 RNU6-772P-201ENST00000516042 105 ntBASIC-1.7□□□□□ -2.68
UPK3BQ9BT76 RNU6-164P-201ENST00000364604 103 ntBASIC-1.71□□□□□ -2.68
UPK3BQ9BT76 SNORD58A-201ENST00000383875 65 ntBASIC-1.71□□□□□ -2.68
UPK3BQ9BT76 MIR548H1-201ENST00000408610 102 ntBASIC-1.71□□□□□ -2.68
UPK3BQ9BT76 RNU2-51P-201ENST00000410708 197 ntBASIC-1.71□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.71□□□□□ -2.68
UPK3BQ9BT76 AC012531.4-201ENST00000616509 177 ntBASIC-1.71□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 RNU6-804P-201ENST00000384286 107 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 RNU6-752P-201ENST00000516376 102 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 MIR3144-201ENST00000579460 79 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 MIR4796-201ENST00000580742 81 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 MIR4503-201ENST00000582187 83 ntBASIC-1.72□□□□□ -2.68
UPK3BQ9BT76 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 346.7 ms