Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.09□□□□□ -2.23
SHISA4Q96DD7 MIR3938-201ENST00000582157 103 ntBASIC1.09□□□□□ -2.23
SHISA4Q96DD7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SHISA4Q96DD7 snoU13.13-201ENST00000458842 104 ntBASIC1.08□□□□□ -2.24
SHISA4Q96DD7 RNU6-122P-201ENST00000516818 107 ntBASIC1.08□□□□□ -2.24
SHISA4Q96DD7 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
SHISA4Q96DD7 AC011195.1-201ENST00000578177 177 ntBASIC1.08□□□□□ -2.24
SHISA4Q96DD7 AC010487.4-201ENST00000637027 61 ntBASIC1.08□□□□□ -2.24
SHISA4Q96DD7 SNORD60.1-201ENST00000362451 73 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 RNU6-1184P-201ENST00000384588 108 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 MIR630-201ENST00000384957 97 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 RNU6-269P-201ENST00000391077 97 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 SNORD99-201ENST00000408612 74 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 MIR548V-201ENST00000584165 80 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 MIR6739-201ENST00000622461 75 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 MIR6828-201ENST00000636181 60 ntBASIC1.07□□□□□ -2.24
SHISA4Q96DD7 MIR18A-201ENST00000362310 71 ntBASIC1.06□□□□□ -2.24
SHISA4Q96DD7 SNORA2.1-201ENST00000363089 137 ntBASIC1.06□□□□□ -2.24
SHISA4Q96DD7 MIR936-201ENST00000401264 98 ntBASIC1.06□□□□□ -2.24
SHISA4Q96DD7 RNA5SP227-201ENST00000516184 113 ntBASIC1.06□□□□□ -2.24
SHISA4Q96DD7 AC018659.1-201ENST00000551083 169 ntBASIC1.06□□□□□ -2.24
SHISA4Q96DD7 RNU6-92P-201ENST00000605893 104 ntBASIC1.06□□□□□ -2.24
SHISA4Q96DD7 RNU6-1312P-201ENST00000362425 108 ntBASIC1.05□□□□□ -2.24
SHISA4Q96DD7 RNA5SP215-201ENST00000363440 122 ntBASIC1.05□□□□□ -2.24
SHISA4Q96DD7 RNA5SP62-201ENST00000363457 110 ntBASIC1.05□□□□□ -2.24
SHISA4Q96DD7 SNORD114-23-201ENST00000363536 72 ntBASIC1.05□□□□□ -2.24
SHISA4Q96DD7 AL157398.1-201ENST00000452981 186 ntBASIC1.05□□□□□ -2.24
SHISA4Q96DD7 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
SHISA4Q96DD7 RNU5B-6P-201ENST00000516765 68 ntBASIC1.04□□□□□ -2.24
SHISA4Q96DD7 AL162376.1-201ENST00000624117 175 ntBASIC1.04□□□□□ -2.24
SHISA4Q96DD7 RNA5SP484-201ENST00000458857 111 ntBASIC1.03□□□□□ -2.24
SHISA4Q96DD7 HAR1A.1-201ENST00000459583 118 ntBASIC1.03□□□□□ -2.24
SHISA4Q96DD7 MIR548AD-201ENST00000584780 82 ntBASIC1.03□□□□□ -2.24
SHISA4Q96DD7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.03□□□□□ -2.24
SHISA4Q96DD7 U4.4-201ENST00000620626 117 ntBASIC1.03□□□□□ -2.24
SHISA4Q96DD7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.02□□□□□ -2.25
SHISA4Q96DD7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
SHISA4Q96DD7 RNA5SP268-201ENST00000516828 124 ntBASIC1.02□□□□□ -2.25
SHISA4Q96DD7 MIR8087-201ENST00000612745 78 ntBASIC1.02□□□□□ -2.25
SHISA4Q96DD7 RNU6-808P-201ENST00000391233 108 ntBASIC1.01□□□□□ -2.25
SHISA4Q96DD7 RNU4-88P-201ENST00000411220 86 ntBASIC1.01□□□□□ -2.25
SHISA4Q96DD7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.01□□□□□ -2.25
SHISA4Q96DD7 U2.7-201ENST00000619197 100 ntBASIC1.01□□□□□ -2.25
SHISA4Q96DD7 MIR330-201ENST00000362196 94 ntBASIC1□□□□□ -2.25
SHISA4Q96DD7 Y_RNA.250-201ENST00000364542 110 ntBASIC1□□□□□ -2.25
SHISA4Q96DD7 MIR521-2-201ENST00000384818 87 ntBASIC1□□□□□ -2.25
SHISA4Q96DD7 RNA5SP193-201ENST00000410353 107 ntBASIC1□□□□□ -2.25
SHISA4Q96DD7 Y_RNA.633-201ENST00000459107 95 ntBASIC1□□□□□ -2.25
SHISA4Q96DD7 RNU7-174P-201ENST00000516248 59 ntBASIC1□□□□□ -2.25
SHISA4Q96DD7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
SHISA4Q96DD7 SNORA41B-201ENST00000384785 128 ntBASIC0.99□□□□□ -2.25
SHISA4Q96DD7 RNA5SP222-201ENST00000411039 105 ntBASIC0.99□□□□□ -2.25
SHISA4Q96DD7 RNA5SP94-201ENST00000516917 108 ntBASIC0.99□□□□□ -2.25
SHISA4Q96DD7 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 SNORA33.1-201ENST00000364957 130 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 MIR548C-201ENST00000384815 97 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 SNORD113-2-201ENST00000391082 72 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 AC006210.1-201ENST00000424882 111 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.98□□□□□ -2.25
SHISA4Q96DD7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.98□□□□□ -2.25
SHISA4Q96DD7 MIR582-201ENST00000365731 98 ntBASIC0.97□□□□□ -2.25
SHISA4Q96DD7 Y_RNA.407-201ENST00000383986 113 ntBASIC0.97□□□□□ -2.25
SHISA4Q96DD7 RNU6-1246P-201ENST00000391064 107 ntBASIC0.97□□□□□ -2.25
SHISA4Q96DD7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
SHISA4Q96DD7 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
SHISA4Q96DD7 AL353765.1-201ENST00000605514 183 ntBASIC0.97□□□□□ -2.25
SHISA4Q96DD7 Y_RNA.325-201ENST00000365171 122 ntBASIC0.96□□□□□ -2.26
SHISA4Q96DD7 RNU6-1162P-201ENST00000384443 104 ntBASIC0.96□□□□□ -2.26
SHISA4Q96DD7 SNORD110-201ENST00000408189 75 ntBASIC0.96□□□□□ -2.26
SHISA4Q96DD7 MIR548AE1-201ENST00000583292 70 ntBASIC0.96□□□□□ -2.26
SHISA4Q96DD7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SHISA4Q96DD7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 RNU6-698P-201ENST00000363523 107 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 RNU6-34P-201ENST00000364874 107 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 MIR517B-201ENST00000385102 67 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 MIR652-201ENST00000385278 98 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 RNU6-980P-201ENST00000516925 103 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 MIR7107-201ENST00000611489 80 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 AC090617.8-201ENST00000623339 167 ntBASIC0.95□□□□□ -2.26
SHISA4Q96DD7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.95□□□□□ -2.26
SHISA4Q96DD7 RNU6-753P-201ENST00000363926 107 ntBASIC0.94□□□□□ -2.26
SHISA4Q96DD7 RNU6-302P-201ENST00000365249 107 ntBASIC0.94□□□□□ -2.26
SHISA4Q96DD7 AC021146.9-201ENST00000512503 156 ntBASIC0.93□□□□□ -2.26
SHISA4Q96DD7 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
SHISA4Q96DD7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.93□□□□□ -2.26
SHISA4Q96DD7 MIR2909-201ENST00000617113 69 ntBASIC0.93□□□□□ -2.26
SHISA4Q96DD7 SNORA9.1-201ENST00000362412 131 ntBASIC0.92□□□□□ -2.26
SHISA4Q96DD7 SNORA36.2-201ENST00000384004 127 ntBASIC0.92□□□□□ -2.26
SHISA4Q96DD7 RNU6-35P-201ENST00000384530 107 ntBASIC0.92□□□□□ -2.26
SHISA4Q96DD7 MIR1197-201ENST00000408818 88 ntBASIC0.92□□□□□ -2.26
SHISA4Q96DD7 MIR548AG1-201ENST00000579932 66 ntBASIC0.92□□□□□ -2.26
SHISA4Q96DD7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SHISA4Q96DD7 SNORA15B-2-201ENST00000384058 135 ntBASIC0.91□□□□□ -2.26
SHISA4Q96DD7 SNORA15B-1-201ENST00000384334 135 ntBASIC0.91□□□□□ -2.26
SHISA4Q96DD7 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
SHISA4Q96DD7 MIR548E-201ENST00000408287 88 ntBASIC0.91□□□□□ -2.26
SHISA4Q96DD7 MIR4473-201ENST00000583731 91 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 273.1 ms