Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SNORA2.1-201ENST00000363089 137 ntBASIC0.36□□□□□ -2.35
FOXRED1Q96CU9 SNORA75.1-201ENST00000391130 148 ntBASIC0.36□□□□□ -2.35
FOXRED1Q96CU9 SNORD2-201ENST00000459163 69 ntBASIC0.36□□□□□ -2.35
FOXRED1Q96CU9 MIR3657-201ENST00000584818 117 ntBASIC0.36□□□□□ -2.35
FOXRED1Q96CU9 RNU6-70P-201ENST00000516438 60 ntBASIC0.35□□□□□ -2.35
FOXRED1Q96CU9 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
FOXRED1Q96CU9 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
FOXRED1Q96CU9 RNU6-990P-201ENST00000364385 104 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 MIR936-201ENST00000401264 98 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 RNU6-782P-201ENST00000516852 104 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 RNU7-188P-201ENST00000517063 64 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 MIR4315-1-201ENST00000636800 73 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 MIR4315-2-201ENST00000640925 73 ntBASIC0.34□□□□□ -2.36
FOXRED1Q96CU9 SNORD45.1-201ENST00000363181 77 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 SNORA63.6-201ENST00000364921 119 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 RNU6-411P-201ENST00000384451 107 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 MIR876-201ENST00000401147 81 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 MIR3925-201ENST00000584674 77 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 MIR8053-201ENST00000613344 75 ntBASIC0.32□□□□□ -2.36
FOXRED1Q96CU9 AC021146.9-201ENST00000512503 156 ntBASIC0.31□□□□□ -2.36
FOXRED1Q96CU9 MIR3134-201ENST00000579433 74 ntBASIC0.31□□□□□ -2.36
FOXRED1Q96CU9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
FOXRED1Q96CU9 RNU6-776P-201ENST00000364403 104 ntBASIC0.3□□□□□ -2.36
FOXRED1Q96CU9 RNU6-1022P-201ENST00000365049 104 ntBASIC0.3□□□□□ -2.36
FOXRED1Q96CU9 MIR489-201ENST00000384923 84 ntBASIC0.3□□□□□ -2.36
FOXRED1Q96CU9 MIR892B-201ENST00000401279 77 ntBASIC0.3□□□□□ -2.36
FOXRED1Q96CU9 MIR548E-201ENST00000408287 88 ntBASIC0.3□□□□□ -2.36
FOXRED1Q96CU9 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
FOXRED1Q96CU9 RNA5SP147-201ENST00000516493 109 ntBASIC0.29□□□□□ -2.36
FOXRED1Q96CU9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.29□□□□□ -2.36
FOXRED1Q96CU9 Y_RNA.788-201ENST00000622394 112 ntBASIC0.29□□□□□ -2.36
FOXRED1Q96CU9 MIR582-201ENST00000365731 98 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 SNORA15B-2-201ENST00000384058 135 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 SNORA15B-1-201ENST00000384334 135 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 Y_RNA.545-201ENST00000384652 105 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 MIR610-201ENST00000385139 96 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 MIR154-201ENST00000385243 84 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 MIR643-201ENST00000385267 97 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 RNU6-587P-201ENST00000391282 106 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 RNA5SP436-201ENST00000516020 115 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 MIR664A-201ENST00000626086 82 ntBASIC0.28□□□□□ -2.36
FOXRED1Q96CU9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.27□□□□□ -2.37
FOXRED1Q96CU9 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
FOXRED1Q96CU9 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
FOXRED1Q96CU9 RNU6-1241P-201ENST00000384536 107 ntBASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 RNU6-604P-201ENST00000390917 100 ntBASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 MIR889-201ENST00000401280 79 ntBASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 SNORA40.17-201ENST00000517256 115 ntBASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
FOXRED1Q96CU9 RNA5SP325-201ENST00000363756 130 ntBASIC0.25□□□□□ -2.37
FOXRED1Q96CU9 MIR106A-201ENST00000384870 81 ntBASIC0.25□□□□□ -2.37
FOXRED1Q96CU9 snoU13.13-201ENST00000458842 104 ntBASIC0.24□□□□□ -2.37
FOXRED1Q96CU9 RNU6-871P-201ENST00000516122 100 ntBASIC0.24□□□□□ -2.37
FOXRED1Q96CU9 RNU6-175P-201ENST00000516896 107 ntBASIC0.24□□□□□ -2.37
FOXRED1Q96CU9 MIR4743-201ENST00000584576 69 ntBASIC0.24□□□□□ -2.37
FOXRED1Q96CU9 RN7SL660P-201ENST00000614852 299 ntBASIC0.24□□□□□ -2.37
FOXRED1Q96CU9 MIR6739-201ENST00000622461 75 ntBASIC0.24□□□□□ -2.37
FOXRED1Q96CU9 RNU6-1296P-201ENST00000383879 107 ntBASIC0.23□□□□□ -2.37
FOXRED1Q96CU9 MIR548H2-201ENST00000408874 88 ntBASIC0.23□□□□□ -2.37
FOXRED1Q96CU9 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 RNU6-1036P-201ENST00000383959 104 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 MIR521-2-201ENST00000384818 87 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 Y_RNA.633-201ENST00000459107 95 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 RNU6-687P-201ENST00000516443 89 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 MIR7111-201ENST00000619751 72 ntBASIC0.22□□□□□ -2.37
FOXRED1Q96CU9 RNU6-895P-201ENST00000384125 103 ntBASIC0.21□□□□□ -2.38
FOXRED1Q96CU9 AC104408.1-201ENST00000605241 170 ntBASIC0.21□□□□□ -2.38
FOXRED1Q96CU9 U6.96-201ENST00000636425 70 ntBASIC0.21□□□□□ -2.38
FOXRED1Q96CU9 SNORD115-22-201ENST00000364456 82 ntBASIC0.2□□□□□ -2.38
FOXRED1Q96CU9 MIR193B-201ENST00000384907 83 ntBASIC0.2□□□□□ -2.38
FOXRED1Q96CU9 RNA5SP163-201ENST00000410304 99 ntBASIC0.2□□□□□ -2.38
FOXRED1Q96CU9 MTND4LP1-201ENST00000446263 157 ntBASIC0.2□□□□□ -2.38
FOXRED1Q96CU9 RNU6-1015P-201ENST00000517121 99 ntBASIC0.2□□□□□ -2.38
FOXRED1Q96CU9 RNA5SP98-201ENST00000363158 137 ntBASIC0.19□□□□□ -2.38
FOXRED1Q96CU9 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
FOXRED1Q96CU9 RNU6-645P-201ENST00000364649 106 ntBASIC0.19□□□□□ -2.38
FOXRED1Q96CU9 RNU6-881P-201ENST00000516813 102 ntBASIC0.19□□□□□ -2.38
FOXRED1Q96CU9 CR383656.4-201ENST00000546909 122 ntBASIC0.19□□□□□ -2.38
FOXRED1Q96CU9 MIR6514-201ENST00000622549 70 ntBASIC0.19□□□□□ -2.38
FOXRED1Q96CU9 SNORA49-201ENST00000386157 136 ntBASIC0.18□□□□□ -2.38
FOXRED1Q96CU9 SNORD113.1-201ENST00000363280 73 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 SNORD45A-201ENST00000384512 84 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 Y_RNA.565-201ENST00000384719 101 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 MIR593-201ENST00000384856 100 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 RNU6-634P-201ENST00000459134 106 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 RNU6-180P-201ENST00000516697 61 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 RNA5SP480-201ENST00000516840 109 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
FOXRED1Q96CU9 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 291.1 ms