Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.92□□□□□ -2.26
TTC39BQ5VTQ0 RNA5SP480-201ENST00000516840 109 ntBASIC0.92□□□□□ -2.26
TTC39BQ5VTQ0 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
TTC39BQ5VTQ0 AC103706.3-201ENST00000636297 85 ntBASIC0.92□□□□□ -2.26
TTC39BQ5VTQ0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.91□□□□□ -2.26
TTC39BQ5VTQ0 Y_RNA.375-201ENST00000365625 101 ntBASIC0.91□□□□□ -2.26
TTC39BQ5VTQ0 MIR9-2-201ENST00000384838 87 ntBASIC0.91□□□□□ -2.26
TTC39BQ5VTQ0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.91□□□□□ -2.26
TTC39BQ5VTQ0 SNORA63.6-201ENST00000364921 119 ntBASIC0.9□□□□□ -2.27
TTC39BQ5VTQ0 SNORA2A-201ENST00000383885 135 ntBASIC0.9□□□□□ -2.27
TTC39BQ5VTQ0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.9□□□□□ -2.27
TTC39BQ5VTQ0 SNORD71-201ENST00000411292 86 ntBASIC0.9□□□□□ -2.27
TTC39BQ5VTQ0 RNU6-229P-201ENST00000516614 102 ntBASIC0.9□□□□□ -2.27
TTC39BQ5VTQ0 AL157398.1-201ENST00000452981 186 ntBASIC0.89□□□□□ -2.27
TTC39BQ5VTQ0 RNU6-1089P-201ENST00000516473 104 ntBASIC0.89□□□□□ -2.27
TTC39BQ5VTQ0 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 SNORA33.1-201ENST00000364957 130 ntBASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 SNORA15B-2-201ENST00000384058 135 ntBASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 SNORA15B-1-201ENST00000384334 135 ntBASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 MIR6755-201ENST00000619993 66 ntBASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
TTC39BQ5VTQ0 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
TTC39BQ5VTQ0 AC098934.3-201ENST00000430450 190 ntBASIC0.87□□□□□ -2.27
TTC39BQ5VTQ0 RNU6-542P-201ENST00000516405 103 ntBASIC0.87□□□□□ -2.27
TTC39BQ5VTQ0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.87□□□□□ -2.27
TTC39BQ5VTQ0 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
TTC39BQ5VTQ0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.86□□□□□ -2.27
TTC39BQ5VTQ0 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
TTC39BQ5VTQ0 MIR20A-201ENST00000362279 71 ntBASIC0.84□□□□□ -2.27
TTC39BQ5VTQ0 RNA5SP215-201ENST00000363440 122 ntBASIC0.84□□□□□ -2.27
TTC39BQ5VTQ0 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
TTC39BQ5VTQ0 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
TTC39BQ5VTQ0 U7.6-201ENST00000610841 64 ntBASIC0.84□□□□□ -2.27
TTC39BQ5VTQ0 MIR516B1-201ENST00000385211 90 ntBASIC0.83□□□□□ -2.28
TTC39BQ5VTQ0 RNA5SP299-201ENST00000391203 116 ntBASIC0.83□□□□□ -2.28
TTC39BQ5VTQ0 AC110620.1-201ENST00000416042 228 ntBASIC0.83□□□□□ -2.28
TTC39BQ5VTQ0 AC244090.1-201ENST00000441884 93 ntBASIC0.83□□□□□ -2.28
TTC39BQ5VTQ0 MIR5000-201ENST00000577717 103 ntBASIC0.83□□□□□ -2.28
TTC39BQ5VTQ0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 MIR548C-201ENST00000384815 97 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 RNU6-848P-201ENST00000515948 107 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 RNU6-617P-201ENST00000516147 107 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 RNU6-473P-201ENST00000516164 107 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
TTC39BQ5VTQ0 MIR501-201ENST00000390204 84 ntBASIC0.81□□□□□ -2.28
TTC39BQ5VTQ0 RNA5SP436-201ENST00000516020 115 ntBASIC0.81□□□□□ -2.28
TTC39BQ5VTQ0 MIR4677-201ENST00000584153 80 ntBASIC0.81□□□□□ -2.28
TTC39BQ5VTQ0 U2.7-201ENST00000619197 100 ntBASIC0.81□□□□□ -2.28
TTC39BQ5VTQ0 SNORD114-26-201ENST00000363543 72 ntBASIC0.8□□□□□ -2.28
TTC39BQ5VTQ0 MIR760-201ENST00000390220 80 ntBASIC0.8□□□□□ -2.28
TTC39BQ5VTQ0 RNU7-188P-201ENST00000517063 64 ntBASIC0.8□□□□□ -2.28
TTC39BQ5VTQ0 MIR548V-201ENST00000584165 80 ntBASIC0.8□□□□□ -2.28
TTC39BQ5VTQ0 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
TTC39BQ5VTQ0 RNU6-945P-201ENST00000383947 107 ntBASIC0.79□□□□□ -2.28
TTC39BQ5VTQ0 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
TTC39BQ5VTQ0 MIR6779-201ENST00000617283 64 ntBASIC0.79□□□□□ -2.28
TTC39BQ5VTQ0 SNORD44.1-201ENST00000363202 61 ntBASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 SNORD114-29-201ENST00000364819 70 ntBASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 MIR548AD-201ENST00000584780 82 ntBASIC0.78□□□□□ -2.28
TTC39BQ5VTQ0 AC243829.6-201ENST00000612652 106 ntBASIC0.77□□□□□ -2.29
TTC39BQ5VTQ0 U6.96-201ENST00000636425 70 ntBASIC0.77□□□□□ -2.29
TTC39BQ5VTQ0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TTC39BQ5VTQ0 RNU6-175P-201ENST00000516896 107 ntBASIC0.76□□□□□ -2.29
TTC39BQ5VTQ0 RNA5SP128-201ENST00000365305 116 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 RNU6-669P-201ENST00000365575 107 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 RNU7-174P-201ENST00000516248 59 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 CYP3A54P-201ENST00000566950 75 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 AC084368.1-201ENST00000620935 65 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 AC090617.8-201ENST00000623339 167 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 MIR499B-201ENST00000636498 73 ntBASIC0.75□□□□□ -2.29
TTC39BQ5VTQ0 SNORA25.5-201ENST00000363782 126 ntBASIC0.74□□□□□ -2.29
TTC39BQ5VTQ0 MIR630-201ENST00000384957 97 ntBASIC0.74□□□□□ -2.29
TTC39BQ5VTQ0 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
TTC39BQ5VTQ0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 RNA5SP192-201ENST00000364404 120 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 RNU6-302P-201ENST00000365249 107 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 MIR216A-201ENST00000385063 110 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 MIR517B-201ENST00000385102 67 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 SNORA49-201ENST00000386157 136 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 RNU6-863P-201ENST00000515989 104 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 MIR3925-201ENST00000584674 77 ntBASIC0.73□□□□□ -2.29
TTC39BQ5VTQ0 RN7SL793P-201ENST00000583259 296 ntBASIC0.72□□□□□ -2.29
TTC39BQ5VTQ0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TTC39BQ5VTQ0 SNORA68.3-201ENST00000515906 83 ntBASIC0.71□□□□□ -2.3
TTC39BQ5VTQ0 RN7SL660P-201ENST00000614852 299 ntBASIC0.71□□□□□ -2.3
TTC39BQ5VTQ0 RNU6-698P-201ENST00000363523 107 ntBASIC0.7□□□□□ -2.3
TTC39BQ5VTQ0 RNA5SP325-201ENST00000363756 130 ntBASIC0.7□□□□□ -2.3
TTC39BQ5VTQ0 RNU6-34P-201ENST00000364874 107 ntBASIC0.7□□□□□ -2.3
TTC39BQ5VTQ0 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
TTC39BQ5VTQ0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC39BQ5VTQ0 SNORD2-201ENST00000459163 69 ntBASIC0.7□□□□□ -2.3
TTC39BQ5VTQ0 RNU7-129P-201ENST00000516128 62 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms