Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AP001094.1-201ENST00000579805 193 ntBASIC-1.49□□□□□ -2.65
ZNF404Q494X3 MIR4777-201ENST00000583710 86 ntBASIC-1.49□□□□□ -2.65
ZNF404Q494X3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.49□□□□□ -2.65
ZNF404Q494X3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.5□□□□□ -2.65
ZNF404Q494X3 SNORA63-201ENST00000363450 132 ntBASIC-1.5□□□□□ -2.65
ZNF404Q494X3 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.5□□□□□ -2.65
ZNF404Q494X3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.5□□□□□ -2.65
ZNF404Q494X3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.5□□□□□ -2.65
ZNF404Q494X3 MIR5009-201ENST00000578736 100 ntBASIC-1.5□□□□□ -2.65
ZNF404Q494X3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.51□□□□□ -2.65
ZNF404Q494X3 SNORD115-22-201ENST00000364456 82 ntBASIC-1.51□□□□□ -2.65
ZNF404Q494X3 MIR527-201ENST00000385244 85 ntBASIC-1.51□□□□□ -2.65
ZNF404Q494X3 AL118496.2-201ENST00000448300 230 ntBASIC-1.51□□□□□ -2.65
ZNF404Q494X3 U6.81-201ENST00000612550 106 ntBASIC-1.51□□□□□ -2.65
ZNF404Q494X3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.51□□□□□ -2.65
ZNF404Q494X3 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 MIR519A2-201ENST00000384990 87 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 AL353691.2-201ENST00000443795 59 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 RNU6-772P-201ENST00000516042 105 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 MIR5591-201ENST00000578248 65 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 MIR6739-201ENST00000622461 75 ntBASIC-1.52□□□□□ -2.65
ZNF404Q494X3 RNU6-200P-201ENST00000364743 107 ntBASIC-1.53□□□□□ -2.65
ZNF404Q494X3 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.53□□□□□ -2.65
ZNF404Q494X3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.53□□□□□ -2.65
ZNF404Q494X3 AL157777.2-201ENST00000258070 137 ntBASIC-1.54□□□□□ -2.66
ZNF404Q494X3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.54□□□□□ -2.66
ZNF404Q494X3 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.54□□□□□ -2.66
ZNF404Q494X3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.54□□□□□ -2.66
ZNF404Q494X3 MIR4503-201ENST00000582187 83 ntBASIC-1.54□□□□□ -2.66
ZNF404Q494X3 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.55□□□□□ -2.66
ZNF404Q494X3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.55□□□□□ -2.66
ZNF404Q494X3 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.55□□□□□ -2.66
ZNF404Q494X3 MIR889-201ENST00000401280 79 ntBASIC-1.55□□□□□ -2.66
ZNF404Q494X3 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.55□□□□□ -2.66
ZNF404Q494X3 MIR3144-201ENST00000579460 79 ntBASIC-1.55□□□□□ -2.66
ZNF404Q494X3 SNORD58A-201ENST00000383875 65 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 RNU6-804P-201ENST00000384286 107 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 RNU6-518P-201ENST00000516056 96 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 RNU6-795P-201ENST00000516323 103 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 MIR4770-201ENST00000579149 58 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 AC012531.4-201ENST00000616509 177 ntBASIC-1.56□□□□□ -2.66
ZNF404Q494X3 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 RNU6-972P-201ENST00000391208 107 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 AL021921.1-201ENST00000442774 93 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 RNU6-752P-201ENST00000516376 102 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.57□□□□□ -2.66
ZNF404Q494X3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 MTND4LP9-201ENST00000427694 174 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 RNA5SP272-201ENST00000516095 111 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 AC004792.1-201ENST00000614523 137 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 MIR6129-201ENST00000616087 109 ntBASIC-1.58□□□□□ -2.66
ZNF404Q494X3 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 RNU6-196P-201ENST00000384315 107 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 SNORA19.1-201ENST00000410656 129 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 RNU6-327P-201ENST00000516270 127 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 RNU6-426P-201ENST00000516464 97 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 MIR4796-201ENST00000580742 81 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 MIR6502-201ENST00000617296 76 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 MIR198-201ENST00000637333 62 ntBASIC-1.59□□□□□ -2.66
ZNF404Q494X3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.6□□□□□ -2.67
ZNF404Q494X3 MIR507-201ENST00000385234 94 ntBASIC-1.6□□□□□ -2.67
ZNF404Q494X3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.6□□□□□ -2.67
ZNF404Q494X3 RNU6-887P-201ENST00000410660 100 ntBASIC-1.61□□□□□ -2.67
ZNF404Q494X3 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.62□□□□□ -2.67
ZNF404Q494X3 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.62□□□□□ -2.67
ZNF404Q494X3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.62□□□□□ -2.67
ZNF404Q494X3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.62□□□□□ -2.67
ZNF404Q494X3 MIR4490-201ENST00000582647 84 ntBASIC-1.62□□□□□ -2.67
ZNF404Q494X3 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.63□□□□□ -2.67
ZNF404Q494X3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.63□□□□□ -2.67
ZNF404Q494X3 AC091912.2-201ENST00000624798 167 ntBASIC-1.63□□□□□ -2.67
ZNF404Q494X3 MIR5683-201ENST00000636514 76 ntBASIC-1.63□□□□□ -2.67
ZNF404Q494X3 MIR1246-201ENST00000636535 73 ntBASIC-1.63□□□□□ -2.67
ZNF404Q494X3 MIR3914-2-201ENST00000637339 95 ntBASIC-1.63□□□□□ -2.67
ZNF404Q494X3 SNORD116-10-201ENST00000363791 102 ntBASIC-1.64□□□□□ -2.67
ZNF404Q494X3 SNORA40-201ENST00000388090 126 ntBASIC-1.64□□□□□ -2.67
ZNF404Q494X3 SNORD19-201ENST00000391191 68 ntBASIC-1.64□□□□□ -2.67
ZNF404Q494X3 MIR1236-201ENST00000408340 102 ntBASIC-1.64□□□□□ -2.67
ZNF404Q494X3 SCARNA23-201ENST00000516060 130 ntBASIC-1.64□□□□□ -2.67
ZNF404Q494X3 AP002795.1-201ENST00000534879 84 ntBASIC-1.64□□□□□ -2.67
ZNF404Q494X3 RNU6-774P-201ENST00000363238 107 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 RNU7-107P-201ENST00000459121 61 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 U7.5-201ENST00000517224 61 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 MTND5P41-201ENST00000517498 206 ntBASIC-1.65□□□□□ -2.67
ZNF404Q494X3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
ZNF404Q494X3 RNU6-379P-201ENST00000363813 104 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms