Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
ZNF260Q3ZCT1 MIR548E-201ENST00000408287 88 ntBASIC0.57□□□□□ -2.32
ZNF260Q3ZCT1 MIR518A1-201ENST00000385068 85 ntBASIC0.56□□□□□ -2.32
ZNF260Q3ZCT1 RNU6-630P-201ENST00000391258 106 ntBASIC0.56□□□□□ -2.32
ZNF260Q3ZCT1 SNORA40.8-201ENST00000411034 126 ntBASIC0.56□□□□□ -2.32
ZNF260Q3ZCT1 RNA5SP436-201ENST00000516020 115 ntBASIC0.56□□□□□ -2.32
ZNF260Q3ZCT1 MIR5706-201ENST00000579841 80 ntBASIC0.56□□□□□ -2.32
ZNF260Q3ZCT1 RNU6-471P-201ENST00000383944 106 ntBASIC0.55□□□□□ -2.32
ZNF260Q3ZCT1 RNU6-895P-201ENST00000384125 103 ntBASIC0.55□□□□□ -2.32
ZNF260Q3ZCT1 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
ZNF260Q3ZCT1 snoU13.13-201ENST00000458842 104 ntBASIC0.55□□□□□ -2.32
ZNF260Q3ZCT1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.55□□□□□ -2.32
ZNF260Q3ZCT1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.54□□□□□ -2.32
ZNF260Q3ZCT1 SNORA25.4-201ENST00000363666 124 ntBASIC0.54□□□□□ -2.32
ZNF260Q3ZCT1 SNORD114-4-201ENST00000363962 75 ntBASIC0.54□□□□□ -2.32
ZNF260Q3ZCT1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.54□□□□□ -2.32
ZNF260Q3ZCT1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.53□□□□□ -2.32
ZNF260Q3ZCT1 MIR501-201ENST00000390204 84 ntBASIC0.53□□□□□ -2.32
ZNF260Q3ZCT1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.52□□□□□ -2.33
ZNF260Q3ZCT1 Y_RNA.340-201ENST00000365330 92 ntBASIC0.52□□□□□ -2.33
ZNF260Q3ZCT1 Y_RNA.375-201ENST00000365625 101 ntBASIC0.52□□□□□ -2.33
ZNF260Q3ZCT1 MIR521-2-201ENST00000384818 87 ntBASIC0.52□□□□□ -2.33
ZNF260Q3ZCT1 RNA5SP480-201ENST00000516840 109 ntBASIC0.52□□□□□ -2.33
ZNF260Q3ZCT1 SNORA63.6-201ENST00000364921 119 ntBASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 MIR216A-201ENST00000385063 110 ntBASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 SNORA49-201ENST00000386157 136 ntBASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 MIR4511-201ENST00000582784 87 ntBASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ZNF260Q3ZCT1 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 SNORA33.1-201ENST00000364957 130 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 AC021146.9-201ENST00000512503 156 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-175P-201ENST00000516896 107 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 MIR6513-201ENST00000621188 64 ntBASIC0.5□□□□□ -2.33
ZNF260Q3ZCT1 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-668P-201ENST00000364180 107 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 SNORA2A-201ENST00000383885 135 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-848P-201ENST00000515948 107 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-617P-201ENST00000516147 107 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-473P-201ENST00000516164 107 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 MIR4677-201ENST00000584153 80 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 uc_338.10-201ENST00000621872 182 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 AC090617.8-201ENST00000623339 167 ntBASIC0.49□□□□□ -2.33
ZNF260Q3ZCT1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
ZNF260Q3ZCT1 MTND4LP1-201ENST00000446263 157 ntBASIC0.48□□□□□ -2.33
ZNF260Q3ZCT1 AC125388.1-201ENST00000459631 156 ntBASIC0.48□□□□□ -2.33
ZNF260Q3ZCT1 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
ZNF260Q3ZCT1 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
ZNF260Q3ZCT1 MIR548AD-201ENST00000584780 82 ntBASIC0.48□□□□□ -2.33
ZNF260Q3ZCT1 MIR9-2-201ENST00000384838 87 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 MIR516B1-201ENST00000385211 90 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-1089P-201ENST00000516473 104 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 RN7SL793P-201ENST00000583259 296 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 MIR3925-201ENST00000584674 77 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 U2.7-201ENST00000619197 100 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
ZNF260Q3ZCT1 SNORD114-26-201ENST00000363543 72 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 AC110620.1-201ENST00000416042 228 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 RNU7-188P-201ENST00000517063 64 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 AC103706.3-201ENST00000636297 85 ntBASIC0.46□□□□□ -2.34
ZNF260Q3ZCT1 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 RNU6-669P-201ENST00000365575 107 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 SNORA15B-2-201ENST00000384058 135 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 SNORA15B-1-201ENST00000384334 135 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 RNU6-1162P-201ENST00000384443 104 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 MIR760-201ENST00000390220 80 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
ZNF260Q3ZCT1 MIR20A-201ENST00000362279 71 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RNA5SP128-201ENST00000365305 116 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RNA5SP299-201ENST00000391203 116 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RNU6-337P-201ENST00000391243 106 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 MIR876-201ENST00000401147 81 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RNU7-174P-201ENST00000516248 59 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RNU6-542P-201ENST00000516405 103 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RN7SL660P-201ENST00000614852 299 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
ZNF260Q3ZCT1 RNA5SP215-201ENST00000363440 122 ntBASIC0.43□□□□□ -2.34
ZNF260Q3ZCT1 MIR499B-201ENST00000636498 73 ntBASIC0.43□□□□□ -2.34
ZNF260Q3ZCT1 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 SNORD114-23-201ENST00000363536 72 ntBASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 SCARNA21.1-201ENST00000515996 128 ntBASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 U7.6-201ENST00000610841 64 ntBASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 U4.4-201ENST00000620626 117 ntBASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
ZNF260Q3ZCT1 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
ZNF260Q3ZCT1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
ZNF260Q3ZCT1 MIR6779-201ENST00000617283 64 ntBASIC0.41□□□□□ -2.34
ZNF260Q3ZCT1 SNORD114-29-201ENST00000364819 70 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms