Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-412P-201ENST00000516434 106 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 MIR4499-201ENST00000584834 69 ntBASIC-1.17□□□□□ -2.6
SCN1BQ07699 SNORD116-21-201ENST00000384507 92 ntBASIC-1.18□□□□□ -2.6
SCN1BQ07699 RNU7-24P-201ENST00000458867 62 ntBASIC-1.18□□□□□ -2.6
SCN1BQ07699 SCARNA23-201ENST00000516060 130 ntBASIC-1.18□□□□□ -2.6
SCN1BQ07699 MIR378F-201ENST00000578143 78 ntBASIC-1.18□□□□□ -2.6
SCN1BQ07699 MIR8068-201ENST00000618032 68 ntBASIC-1.18□□□□□ -2.6
SCN1BQ07699 SNORD116-14-201ENST00000383894 92 ntBASIC-1.19□□□□□ -2.6
SCN1BQ07699 SNORD116-17-201ENST00000383929 92 ntBASIC-1.19□□□□□ -2.6
SCN1BQ07699 SNORD116-15-201ENST00000384445 92 ntBASIC-1.19□□□□□ -2.6
SCN1BQ07699 SNORD116-19-201ENST00000384729 92 ntBASIC-1.19□□□□□ -2.6
SCN1BQ07699 RNU6-337P-201ENST00000391243 106 ntBASIC-1.19□□□□□ -2.6
SCN1BQ07699 RNU6-592P-201ENST00000411333 103 ntBASIC-1.19□□□□□ -2.6
SCN1BQ07699 RNU6-972P-201ENST00000391208 107 ntBASIC-1.2□□□□□ -2.6
SCN1BQ07699 MIR548I1-201ENST00000408810 149 ntBASIC-1.2□□□□□ -2.6
SCN1BQ07699 RNU6-904P-201ENST00000516206 101 ntBASIC-1.2□□□□□ -2.6
SCN1BQ07699 uc_338.19-201ENST00000616808 99 ntBASIC-1.2□□□□□ -2.6
SCN1BQ07699 AC006254.2-201ENST00000603259 279 ntBASIC-1.21□□□□□ -2.6
SCN1BQ07699 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.21□□□□□ -2.6
SCN1BQ07699 MIR198-201ENST00000637333 62 ntBASIC-1.21□□□□□ -2.6
SCN1BQ07699 SNORD115-23-201ENST00000364461 82 ntBASIC-1.22□□□□□ -2.6
SCN1BQ07699 SNORD58A-201ENST00000383875 65 ntBASIC-1.22□□□□□ -2.6
SCN1BQ07699 RNU6-887P-201ENST00000410660 100 ntBASIC-1.22□□□□□ -2.6
SCN1BQ07699 MIR3165-201ENST00000579874 75 ntBASIC-1.22□□□□□ -2.6
SCN1BQ07699 U6.96-201ENST00000636425 70 ntBASIC-1.22□□□□□ -2.6
SCN1BQ07699 RNU5F-1-201ENST00000362507 117 ntBASIC-1.23□□□□□ -2.61
SCN1BQ07699 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
SCN1BQ07699 RNU6-382P-201ENST00000365181 106 ntBASIC-1.23□□□□□ -2.61
SCN1BQ07699 RNU6-274P-201ENST00000459566 107 ntBASIC-1.23□□□□□ -2.61
SCN1BQ07699 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.24□□□□□ -2.61
SCN1BQ07699 AC022137.1-201ENST00000483735 151 ntBASIC-1.24□□□□□ -2.61
SCN1BQ07699 RNA5SP180-201ENST00000516181 101 ntBASIC-1.24□□□□□ -2.61
SCN1BQ07699 U4.2-201ENST00000618561 85 ntBASIC-1.24□□□□□ -2.61
SCN1BQ07699 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.24□□□□□ -2.61
SCN1BQ07699 MIR4773-1-201ENST00000637203 78 ntBASIC-1.24□□□□□ -2.61
SCN1BQ07699 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.24□□□□□ -2.61
SCN1BQ07699 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
SCN1BQ07699 AP000533.3-201ENST00000447704 118 ntBASIC-1.25□□□□□ -2.61
SCN1BQ07699 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.25□□□□□ -2.61
SCN1BQ07699 MIR517B-201ENST00000385102 67 ntBASIC-1.26□□□□□ -2.61
SCN1BQ07699 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.26□□□□□ -2.61
SCN1BQ07699 SCARNA18B-201ENST00000458806 135 ntBASIC-1.26□□□□□ -2.61
SCN1BQ07699 AC026421.1-201ENST00000519101 163 ntBASIC-1.26□□□□□ -2.61
SCN1BQ07699 RNU6-209P-201ENST00000384118 107 ntBASIC-1.27□□□□□ -2.61
SCN1BQ07699 RNU6-905P-201ENST00000384434 107 ntBASIC-1.27□□□□□ -2.61
SCN1BQ07699 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.27□□□□□ -2.61
SCN1BQ07699 MIR3133-201ENST00000583157 78 ntBASIC-1.27□□□□□ -2.61
SCN1BQ07699 MIR4306-201ENST00000583390 91 ntBASIC-1.27□□□□□ -2.61
SCN1BQ07699 SNORD116-10-201ENST00000363791 102 ntBASIC-1.28□□□□□ -2.61
SCN1BQ07699 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.28□□□□□ -2.61
SCN1BQ07699 SNORD74.6-201ENST00000364796 70 ntBASIC-1.28□□□□□ -2.61
SCN1BQ07699 RNU6-431P-201ENST00000383874 107 ntBASIC-1.28□□□□□ -2.61
SCN1BQ07699 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.28□□□□□ -2.61
SCN1BQ07699 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.29□□□□□ -2.62
SCN1BQ07699 RNU6-824P-201ENST00000363724 104 ntBASIC-1.29□□□□□ -2.62
SCN1BQ07699 SNORD64-201ENST00000386683 67 ntBASIC-1.29□□□□□ -2.62
SCN1BQ07699 AC140658.3-201ENST00000567603 271 ntBASIC-1.29□□□□□ -2.62
SCN1BQ07699 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.29□□□□□ -2.62
SCN1BQ07699 MIR203A-201ENST00000384836 110 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 MIR1302-5-201ENST00000408164 150 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 snoU13.17-201ENST00000458802 104 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 RNU7-61P-201ENST00000515897 61 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 RNA5SP147-201ENST00000516493 109 ntBASIC-1.3□□□□□ -2.62
SCN1BQ07699 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.31□□□□□ -2.62
SCN1BQ07699 RNU6-260P-201ENST00000384092 107 ntBASIC-1.31□□□□□ -2.62
SCN1BQ07699 MIR590-201ENST00000385008 97 ntBASIC-1.31□□□□□ -2.62
SCN1BQ07699 YWHAEP3-201ENST00000582767 121 ntBASIC-1.31□□□□□ -2.62
SCN1BQ07699 MIR6509-201ENST00000614603 85 ntBASIC-1.31□□□□□ -2.62
SCN1BQ07699 AC090617.8-201ENST00000623339 167 ntBASIC-1.31□□□□□ -2.62
SCN1BQ07699 RNU6-774P-201ENST00000363238 107 ntBASIC-1.32□□□□□ -2.62
SCN1BQ07699 RNU6-704P-201ENST00000364162 103 ntBASIC-1.32□□□□□ -2.62
SCN1BQ07699 MIR147A-201ENST00000385079 72 ntBASIC-1.32□□□□□ -2.62
SCN1BQ07699 MIR4796-201ENST00000580742 81 ntBASIC-1.32□□□□□ -2.62
SCN1BQ07699 MIR382-201ENST00000637119 76 ntBASIC-1.32□□□□□ -2.62
SCN1BQ07699 SNORA62.4-201ENST00000365504 151 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 SNORD18.2-201ENST00000459604 70 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.33□□□□□ -2.62
SCN1BQ07699 RNU6-208P-201ENST00000362431 107 ntBASIC-1.34□□□□□ -2.62
SCN1BQ07699 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.35□□□□□ -2.63
SCN1BQ07699 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.35□□□□□ -2.63
SCN1BQ07699 AL691482.2-201ENST00000457453 84 ntBASIC-1.35□□□□□ -2.63
SCN1BQ07699 RNU6-537P-201ENST00000517277 103 ntBASIC-1.35□□□□□ -2.63
SCN1BQ07699 MIR365A-201ENST00000362260 87 ntBASIC-1.36□□□□□ -2.63
SCN1BQ07699 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.36□□□□□ -2.63
SCN1BQ07699 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.36□□□□□ -2.63
SCN1BQ07699 MIR124-2-201ENST00000385081 109 ntBASIC-1.36□□□□□ -2.63
SCN1BQ07699 MIR1285-2-201ENST00000408311 88 ntBASIC-1.36□□□□□ -2.63
SCN1BQ07699 MIR3657-201ENST00000584818 117 ntBASIC-1.36□□□□□ -2.63
SCN1BQ07699 SNORA2.1-201ENST00000363089 137 ntBASIC-1.37□□□□□ -2.63
SCN1BQ07699 MIR4441-201ENST00000582623 100 ntBASIC-1.37□□□□□ -2.63
SCN1BQ07699 AL353803.5-201ENST00000599815 141 ntBASIC-1.37□□□□□ -2.63
SCN1BQ07699 SNORA33.1-201ENST00000364957 130 ntBASIC-1.38□□□□□ -2.63
SCN1BQ07699 MIR1236-201ENST00000408340 102 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms