Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.39□□□□□ -2.47
CTCFP49711 AC114755.3-201ENST00000481111 251 ntBASIC-0.39□□□□□ -2.47
CTCFP49711 RNA5SP169-201ENST00000517268 117 ntBASIC-0.39□□□□□ -2.47
CTCFP49711 AC026421.1-201ENST00000519101 163 ntBASIC-0.39□□□□□ -2.47
CTCFP49711 RNU6-502P-201ENST00000362419 108 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 SNORD114-14-201ENST00000362723 75 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 MT-TQ-201ENST00000387372 72 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 SNORA18.5-201ENST00000516616 101 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 AP000676.1-201ENST00000533307 52 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 AC093726.3-201ENST00000637588 150 ntBASIC-0.4□□□□□ -2.47
CTCFP49711 SNORD114-4-201ENST00000363962 75 ntBASIC-0.41□□□□□ -2.48
CTCFP49711 SNORD90-201ENST00000391145 111 ntBASIC-0.41□□□□□ -2.48
CTCFP49711 AL606753.1-201ENST00000427435 87 ntBASIC-0.41□□□□□ -2.48
CTCFP49711 snoU13.13-201ENST00000458842 104 ntBASIC-0.41□□□□□ -2.48
CTCFP49711 SNORA40.17-201ENST00000517256 115 ntBASIC-0.41□□□□□ -2.48
CTCFP49711 MIR6851-201ENST00000617060 67 ntBASIC-0.41□□□□□ -2.48
CTCFP49711 RNU6-495P-201ENST00000362995 107 ntBASIC-0.42□□□□□ -2.48
CTCFP49711 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
CTCFP49711 RNY4P18-201ENST00000391107 89 ntBASIC-0.42□□□□□ -2.48
CTCFP49711 SNORD2-201ENST00000459163 69 ntBASIC-0.42□□□□□ -2.48
CTCFP49711 U7.3-201ENST00000616123 62 ntBASIC-0.42□□□□□ -2.48
CTCFP49711 MIR4320-201ENST00000636981 65 ntBASIC-0.42□□□□□ -2.48
CTCFP49711 RNU6-973P-201ENST00000364690 107 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 RNU6-162P-201ENST00000516228 103 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 RNU6-158P-201ENST00000517104 100 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
CTCFP49711 SNORD114-3-201ENST00000364969 75 ntBASIC-0.44□□□□□ -2.48
CTCFP49711 MIR587-201ENST00000384845 96 ntBASIC-0.44□□□□□ -2.48
CTCFP49711 RNU6-789P-201ENST00000517105 102 ntBASIC-0.44□□□□□ -2.48
CTCFP49711 SNORD115-23-201ENST00000364461 82 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 RNU6-337P-201ENST00000391243 106 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 RNU6-592P-201ENST00000411333 103 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 AL031737.1-201ENST00000450125 223 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 RNU7-24P-201ENST00000458867 62 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 RNU6-406P-201ENST00000516470 107 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 SNORD38.3-201ENST00000516599 73 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
CTCFP49711 MIRLET7B-201ENST00000385140 83 ntBASIC-0.46□□□□□ -2.48
CTCFP49711 MTATP6P29-201ENST00000415057 132 ntBASIC-0.46□□□□□ -2.48
CTCFP49711 MTATP8P2-201ENST00000435212 202 ntBASIC-0.46□□□□□ -2.48
CTCFP49711 AL445193.1-201ENST00000441183 141 ntBASIC-0.46□□□□□ -2.48
CTCFP49711 MIR6773-201ENST00000612812 74 ntBASIC-0.46□□□□□ -2.48
CTCFP49711 MIR450A1-201ENST00000362262 91 ntBASIC-0.47□□□□□ -2.48
CTCFP49711 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.47□□□□□ -2.48
CTCFP49711 SNORA63.6-201ENST00000364921 119 ntBASIC-0.47□□□□□ -2.48
CTCFP49711 SNORA3B-201ENST00000391305 131 ntBASIC-0.47□□□□□ -2.48
CTCFP49711 SNORD75.2-201ENST00000408784 58 ntBASIC-0.47□□□□□ -2.48
CTCFP49711 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.47□□□□□ -2.48
CTCFP49711 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 RNU6-990P-201ENST00000364385 104 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 RNU6-901P-201ENST00000384593 106 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 RNU6-721P-201ENST00000410155 105 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 SNORA13-201ENST00000458790 133 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 MIR5704-201ENST00000584029 77 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 MIR8068-201ENST00000618032 68 ntBASIC-0.48□□□□□ -2.49
CTCFP49711 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.49□□□□□ -2.49
CTCFP49711 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
CTCFP49711 MIR3681-201ENST00000580089 72 ntBASIC-0.49□□□□□ -2.49
CTCFP49711 RNU6-755P-201ENST00000364400 103 ntBASIC-0.5□□□□□ -2.49
CTCFP49711 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.5□□□□□ -2.49
CTCFP49711 RNU4-61P-201ENST00000411243 107 ntBASIC-0.5□□□□□ -2.49
CTCFP49711 MIR6854-201ENST00000614935 69 ntBASIC-0.5□□□□□ -2.49
CTCFP49711 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.5□□□□□ -2.49
CTCFP49711 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.51□□□□□ -2.49
CTCFP49711 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.51□□□□□ -2.49
CTCFP49711 MIR518B-201ENST00000385127 83 ntBASIC-0.51□□□□□ -2.49
CTCFP49711 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
CTCFP49711 AC021146.6-201ENST00000514659 117 ntBASIC-0.51□□□□□ -2.49
CTCFP49711 RNU6-881P-201ENST00000516813 102 ntBASIC-0.51□□□□□ -2.49
CTCFP49711 MIR4796-201ENST00000580742 81 ntBASIC-0.51□□□□□ -2.49
CTCFP49711 RNU5F-1-201ENST00000362507 117 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 RNU6-824P-201ENST00000363724 104 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 RNU6-905P-201ENST00000384434 107 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR204-201ENST00000385200 110 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR1236-201ENST00000408340 102 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.52□□□□□ -2.49
CTCFP49711 SNORD22.1-201ENST00000516331 125 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR3179-1-201ENST00000578940 84 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR3179-2-201ENST00000579107 84 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR3179-3-201ENST00000579566 84 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR3179-4-201ENST00000617599 84 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 AC090617.8-201ENST00000623339 167 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 MIR2052-201ENST00000636055 55 ntBASIC-0.52□□□□□ -2.49
CTCFP49711 SNORD74.6-201ENST00000364796 70 ntBASIC-0.53□□□□□ -2.49
CTCFP49711 RNU6-382P-201ENST00000365181 106 ntBASIC-0.53□□□□□ -2.49
CTCFP49711 snoU13.17-201ENST00000458802 104 ntBASIC-0.53□□□□□ -2.49
CTCFP49711 MIR4464-201ENST00000580818 92 ntBASIC-0.53□□□□□ -2.49
CTCFP49711 YWHAEP3-201ENST00000582767 121 ntBASIC-0.53□□□□□ -2.49
CTCFP49711 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.54□□□□□ -2.5
CTCFP49711 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CTCFP49711 AP001318.4-201ENST00000616637 121 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 254.7 ms