Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU6-226P-201ENST00000363778 107 ntBASIC-1.71□□□□□ -2.68
RPL28P46779 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.71□□□□□ -2.68
RPL28P46779 RNA5SP86-201ENST00000390869 98 ntBASIC-1.71□□□□□ -2.68
RPL28P46779 RNU6-111P-201ENST00000517179 105 ntBASIC-1.71□□□□□ -2.68
RPL28P46779 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.72□□□□□ -2.68
RPL28P46779 SNORD58C-201ENST00000365223 64 ntBASIC-1.72□□□□□ -2.68
RPL28P46779 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.72□□□□□ -2.68
RPL28P46779 MIR4679-2-201ENST00000578358 77 ntBASIC-1.72□□□□□ -2.68
RPL28P46779 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.73□□□□□ -2.69
RPL28P46779 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.73□□□□□ -2.69
RPL28P46779 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.73□□□□□ -2.69
RPL28P46779 MIR3128-201ENST00000581957 66 ntBASIC-1.73□□□□□ -2.69
RPL28P46779 MIR4777-201ENST00000583710 86 ntBASIC-1.73□□□□□ -2.69
RPL28P46779 AC072026.1-201ENST00000605023 201 ntBASIC-1.73□□□□□ -2.69
RPL28P46779 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.73□□□□□ -2.69
RPL28P46779 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 U4.2-201ENST00000618561 85 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 MIR1246-201ENST00000636535 73 ntBASIC-1.74□□□□□ -2.69
RPL28P46779 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.75□□□□□ -2.69
RPL28P46779 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.75□□□□□ -2.69
RPL28P46779 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.75□□□□□ -2.69
RPL28P46779 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.75□□□□□ -2.69
RPL28P46779 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.75□□□□□ -2.69
RPL28P46779 U7.2-201ENST00000607576 63 ntBASIC-1.75□□□□□ -2.69
RPL28P46779 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.76□□□□□ -2.69
RPL28P46779 RNU6-400P-201ENST00000391173 106 ntBASIC-1.76□□□□□ -2.69
RPL28P46779 MIR513C-201ENST00000401352 84 ntBASIC-1.76□□□□□ -2.69
RPL28P46779 MIR548H1-201ENST00000408610 102 ntBASIC-1.76□□□□□ -2.69
RPL28P46779 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.76□□□□□ -2.69
RPL28P46779 RNU6-79P-201ENST00000362511 107 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 RNU6-704P-201ENST00000364162 103 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 AC018880.2-201ENST00000414265 201 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 RNU6-752P-201ENST00000516376 102 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 AL117187.1-201ENST00000555482 181 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 MIR4801-201ENST00000582704 82 ntBASIC-1.77□□□□□ -2.69
RPL28P46779 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.78□□□□□ -2.69
RPL28P46779 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.78□□□□□ -2.69
RPL28P46779 RNU6-478P-201ENST00000363904 110 ntBASIC-1.78□□□□□ -2.69
RPL28P46779 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.78□□□□□ -2.69
RPL28P46779 RNU6-656P-201ENST00000516785 107 ntBASIC-1.78□□□□□ -2.69
RPL28P46779 U2.7-201ENST00000619197 100 ntBASIC-1.78□□□□□ -2.69
RPL28P46779 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.79□□□□□ -2.7
RPL28P46779 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.79□□□□□ -2.7
RPL28P46779 MIR4796-201ENST00000580742 81 ntBASIC-1.79□□□□□ -2.7
RPL28P46779 SNORD115-27-201ENST00000364430 82 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 MIR548Q-201ENST00000408404 100 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 RNU6-795P-201ENST00000516323 103 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 RNU6-807P-201ENST00000516805 107 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 MIR5009-201ENST00000578736 100 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 AC012531.4-201ENST00000616509 177 ntBASIC-1.8□□□□□ -2.7
RPL28P46779 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.81□□□□□ -2.7
RPL28P46779 SNORD114-3-201ENST00000364969 75 ntBASIC-1.81□□□□□ -2.7
RPL28P46779 SNORD58A-201ENST00000383875 65 ntBASIC-1.81□□□□□ -2.7
RPL28P46779 AL118496.2-201ENST00000448300 230 ntBASIC-1.81□□□□□ -2.7
RPL28P46779 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.81□□□□□ -2.7
RPL28P46779 AC044792.1-201ENST00000593294 196 ntBASIC-1.81□□□□□ -2.7
RPL28P46779 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
RPL28P46779 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.82□□□□□ -2.7
RPL28P46779 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.82□□□□□ -2.7
RPL28P46779 SNORA20.1-201ENST00000364790 130 ntBASIC-1.82□□□□□ -2.7
RPL28P46779 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.82□□□□□ -2.7
RPL28P46779 RNU6-861P-201ENST00000516745 106 ntBASIC-1.82□□□□□ -2.7
RPL28P46779 MIR548X2-201ENST00000579776 100 ntBASIC-1.82□□□□□ -2.7
RPL28P46779 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.83□□□□□ -2.7
RPL28P46779 RNU6-682P-201ENST00000363843 106 ntBASIC-1.83□□□□□ -2.7
RPL28P46779 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.83□□□□□ -2.7
RPL28P46779 RNU6-340P-201ENST00000364005 107 ntBASIC-1.84□□□□□ -2.7
RPL28P46779 RNU6-608P-201ENST00000383927 104 ntBASIC-1.84□□□□□ -2.7
RPL28P46779 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.84□□□□□ -2.7
RPL28P46779 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.84□□□□□ -2.7
RPL28P46779 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.84□□□□□ -2.7
RPL28P46779 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.84□□□□□ -2.7
RPL28P46779 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.85□□□□□ -2.71
RPL28P46779 MIR487B-201ENST00000385021 84 ntBASIC-1.85□□□□□ -2.71
RPL28P46779 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.85□□□□□ -2.71
RPL28P46779 AC062037.2-201ENST00000610137 73 ntBASIC-1.85□□□□□ -2.71
RPL28P46779 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 SNORD116-18-201ENST00000383961 92 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 RNU6-458P-201ENST00000384179 107 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 MIR569-201ENST00000385228 96 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 RNU6-972P-201ENST00000391208 107 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 AL035461.1-201ENST00000421490 332 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 MIR4723-201ENST00000585070 81 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 U6.58-201ENST00000613107 107 ntBASIC-1.86□□□□□ -2.71
RPL28P46779 SNORD18.1-201ENST00000363807 70 ntBASIC-1.87□□□□□ -2.71
RPL28P46779 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.87□□□□□ -2.71
RPL28P46779 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.87□□□□□ -2.71
RPL28P46779 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.87□□□□□ -2.71
RPL28P46779 RNU6-696P-201ENST00000390834 107 ntBASIC-1.87□□□□□ -2.71
RPL28P46779 AL450471.1-201ENST00000447509 127 ntBASIC-1.87□□□□□ -2.71
RPL28P46779 RNU6-772P-201ENST00000516042 105 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms