Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORD58C-201ENST00000365223 64 ntBASIC-2.07□□□□□ -2.74
HLA-DQB2P05538 U7.5-201ENST00000517224 61 ntBASIC-2.07□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.08□□□□□ -2.74
HLA-DQB2P05538 SNORD19-201ENST00000391191 68 ntBASIC-2.08□□□□□ -2.74
HLA-DQB2P05538 AL021921.1-201ENST00000442774 93 ntBASIC-2.08□□□□□ -2.74
HLA-DQB2P05538 RNU6-412P-201ENST00000516434 106 ntBASIC-2.08□□□□□ -2.74
HLA-DQB2P05538 U6.81-201ENST00000612550 106 ntBASIC-2.08□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.09□□□□□ -2.74
HLA-DQB2P05538 SNORA20.1-201ENST00000364790 130 ntBASIC-2.09□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.09□□□□□ -2.74
HLA-DQB2P05538 AL117187.1-201ENST00000555482 181 ntBASIC-2.09□□□□□ -2.74
HLA-DQB2P05538 U7.2-201ENST00000607576 63 ntBASIC-2.09□□□□□ -2.74
HLA-DQB2P05538 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.1□□□□□ -2.75
HLA-DQB2P05538 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.1□□□□□ -2.75
HLA-DQB2P05538 MIR6739-201ENST00000622461 75 ntBASIC-2.1□□□□□ -2.75
HLA-DQB2P05538 RNU6-226P-201ENST00000363778 107 ntBASIC-2.11□□□□□ -2.75
HLA-DQB2P05538 AC090616.4-201ENST00000448026 115 ntBASIC-2.11□□□□□ -2.75
HLA-DQB2P05538 MIR4679-2-201ENST00000578358 77 ntBASIC-2.11□□□□□ -2.75
HLA-DQB2P05538 MIR4801-201ENST00000582704 82 ntBASIC-2.11□□□□□ -2.75
HLA-DQB2P05538 AC044792.1-201ENST00000593294 196 ntBASIC-2.11□□□□□ -2.75
HLA-DQB2P05538 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.12□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.12□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.12□□□□□ -2.75
HLA-DQB2P05538 MIR548AG1-201ENST00000579932 66 ntBASIC-2.12□□□□□ -2.75
HLA-DQB2P05538 MIR4441-201ENST00000582623 100 ntBASIC-2.12□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.13□□□□□ -2.75
HLA-DQB2P05538 RNU6-246P-201ENST00000384702 107 ntBASIC-2.13□□□□□ -2.75
HLA-DQB2P05538 MIR548Q-201ENST00000408404 100 ntBASIC-2.13□□□□□ -2.75
HLA-DQB2P05538 MIR4777-201ENST00000583710 86 ntBASIC-2.13□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.14□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.14□□□□□ -2.75
HLA-DQB2P05538 RNU6-168P-201ENST00000516189 101 ntBASIC-2.14□□□□□ -2.75
HLA-DQB2P05538 RNU6-795P-201ENST00000516323 103 ntBASIC-2.14□□□□□ -2.75
HLA-DQB2P05538 RNU6-861P-201ENST00000516745 106 ntBASIC-2.14□□□□□ -2.75
HLA-DQB2P05538 MIR365A-201ENST00000362260 87 ntBASIC-2.15□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.15□□□□□ -2.75
HLA-DQB2P05538 RNU6-774P-201ENST00000363238 107 ntBASIC-2.15□□□□□ -2.75
HLA-DQB2P05538 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.15□□□□□ -2.75
HLA-DQB2P05538 SNORD116-18-201ENST00000383961 92 ntBASIC-2.16□□□□□ -2.76
HLA-DQB2P05538 MIR1468-201ENST00000410600 86 ntBASIC-2.16□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.16□□□□□ -2.76
HLA-DQB2P05538 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.16□□□□□ -2.76
HLA-DQB2P05538 MIR548X2-201ENST00000579776 100 ntBASIC-2.16□□□□□ -2.76
HLA-DQB2P05538 AC062037.2-201ENST00000610137 73 ntBASIC-2.16□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.17□□□□□ -2.76
HLA-DQB2P05538 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.17□□□□□ -2.76
HLA-DQB2P05538 MIR5009-201ENST00000578736 100 ntBASIC-2.17□□□□□ -2.76
HLA-DQB2P05538 MIR4796-201ENST00000580742 81 ntBASIC-2.17□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.18□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.18□□□□□ -2.76
HLA-DQB2P05538 AC018880.2-201ENST00000414265 201 ntBASIC-2.18□□□□□ -2.76
HLA-DQB2P05538 AC008737.2-201ENST00000599446 118 ntBASIC-2.18□□□□□ -2.76
HLA-DQB2P05538 AC012531.4-201ENST00000616509 177 ntBASIC-2.18□□□□□ -2.76
HLA-DQB2P05538 RNU6-983P-201ENST00000516004 103 ntBASIC-2.19□□□□□ -2.76
HLA-DQB2P05538 RNU6-752P-201ENST00000516376 102 ntBASIC-2.19□□□□□ -2.76
HLA-DQB2P05538 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.2□□□□□ -2.76
HLA-DQB2P05538 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.2□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.2□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.2□□□□□ -2.76
HLA-DQB2P05538 AL118496.2-201ENST00000448300 230 ntBASIC-2.2□□□□□ -2.76
HLA-DQB2P05538 MIR548H1-201ENST00000408610 102 ntBASIC-2.21□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.21□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.21□□□□□ -2.76
HLA-DQB2P05538 RNU6-682P-201ENST00000363843 106 ntBASIC-2.22□□□□□ -2.76
HLA-DQB2P05538 SNORD58A-201ENST00000383875 65 ntBASIC-2.22□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.22□□□□□ -2.76
HLA-DQB2P05538 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.22□□□□□ -2.76
HLA-DQB2P05538 RNU6-772P-201ENST00000516042 105 ntBASIC-2.22□□□□□ -2.76
HLA-DQB2P05538 RNU6-158P-201ENST00000517104 100 ntBASIC-2.22□□□□□ -2.76
HLA-DQB2P05538 RNU6-400P-201ENST00000391173 106 ntBASIC-2.23□□□□□ -2.77
HLA-DQB2P05538 AL450471.1-201ENST00000447509 127 ntBASIC-2.23□□□□□ -2.77
HLA-DQB2P05538 RNU6-656P-201ENST00000516785 107 ntBASIC-2.23□□□□□ -2.77
HLA-DQB2P05538 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.23□□□□□ -2.77
HLA-DQB2P05538 U2.7-201ENST00000619197 100 ntBASIC-2.23□□□□□ -2.77
HLA-DQB2P05538 AL157777.2-201ENST00000258070 137 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 RNU6-478P-201ENST00000363904 110 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 RNU6-540P-201ENST00000384622 101 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 RNA5SP86-201ENST00000390869 98 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 MIR1302-3-201ENST00000408128 138 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 RNA5SP272-201ENST00000516095 111 ntBASIC-2.24□□□□□ -2.77
HLA-DQB2P05538 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 MIR548C-201ENST00000384815 97 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 MIR606-201ENST00000384851 96 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 MIR569-201ENST00000385228 96 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 RNU6-972P-201ENST00000391208 107 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 MTCYBP9-201ENST00000431021 303 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 RNU7-120P-201ENST00000459334 63 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 RNU6-807P-201ENST00000516805 107 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.25□□□□□ -2.77
HLA-DQB2P05538 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.26□□□□□ -2.77
HLA-DQB2P05538 MIR568-201ENST00000385036 95 ntBASIC-2.27□□□□□ -2.77
HLA-DQB2P05538 RNU6-887P-201ENST00000410660 100 ntBASIC-2.27□□□□□ -2.77
HLA-DQB2P05538 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.27□□□□□ -2.77
HLA-DQB2P05538 SNORD18.1-201ENST00000363807 70 ntBASIC-2.28□□□□□ -2.77
HLA-DQB2P05538 RNU6-340P-201ENST00000364005 107 ntBASIC-2.28□□□□□ -2.77
HLA-DQB2P05538 MIR1236-201ENST00000408340 102 ntBASIC-2.28□□□□□ -2.77
HLA-DQB2P05538 AL035461.1-201ENST00000421490 332 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms