Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.5□□□□□ -2.49
MMP1P03956 AC114755.3-201ENST00000481111 251 ntBASIC-0.5□□□□□ -2.49
MMP1P03956 MIR6773-201ENST00000612812 74 ntBASIC-0.5□□□□□ -2.49
MMP1P03956 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
MMP1P03956 RNU6-901P-201ENST00000384593 106 ntBASIC-0.51□□□□□ -2.49
MMP1P03956 RNU6-313P-201ENST00000516317 112 ntBASIC-0.51□□□□□ -2.49
MMP1P03956 MIR4796-201ENST00000580742 81 ntBASIC-0.51□□□□□ -2.49
MMP1P03956 MIR6851-201ENST00000617060 67 ntBASIC-0.51□□□□□ -2.49
MMP1P03956 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 RNA5SP331-201ENST00000364986 107 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 MTATP8P2-201ENST00000435212 202 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 RNU7-153P-201ENST00000516455 62 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 RNU6-158P-201ENST00000517104 100 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 AL391099.1-201ENST00000624635 187 ntBASIC-0.52□□□□□ -2.49
MMP1P03956 SNORD115-27-201ENST00000364430 82 ntBASIC-0.53□□□□□ -2.49
MMP1P03956 MIRLET7B-201ENST00000385140 83 ntBASIC-0.53□□□□□ -2.49
MMP1P03956 RNY4P18-201ENST00000391107 89 ntBASIC-0.53□□□□□ -2.49
MMP1P03956 MIR5704-201ENST00000584029 77 ntBASIC-0.53□□□□□ -2.49
MMP1P03956 RNU5F-1-201ENST00000362507 117 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 SNORD115-23-201ENST00000364461 82 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 MIR224-201ENST00000384889 81 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 MIR1236-201ENST00000408340 102 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 RNU2-51P-201ENST00000410708 197 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 RNU6-592P-201ENST00000411333 103 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.54□□□□□ -2.5
MMP1P03956 AC021146.9-201ENST00000512503 156 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 AC006254.2-201ENST00000603259 279 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 U6.81-201ENST00000612550 106 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.54□□□□□ -2.5
MMP1P03956 MIR4773-1-201ENST00000637203 78 ntBASIC-0.54□□□□□ -2.5
MMP1P03956 MIR409-201ENST00000362237 79 ntBASIC-0.55□□□□□ -2.5
MMP1P03956 MIR450A1-201ENST00000362262 91 ntBASIC-0.55□□□□□ -2.5
MMP1P03956 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.55□□□□□ -2.5
MMP1P03956 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.55□□□□□ -2.5
MMP1P03956 MIR8068-201ENST00000618032 68 ntBASIC-0.55□□□□□ -2.5
MMP1P03956 RNU6-260P-201ENST00000384092 107 ntBASIC-0.56□□□□□ -2.5
MMP1P03956 MIR4436A-201ENST00000585278 85 ntBASIC-0.56□□□□□ -2.5
MMP1P03956 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
MMP1P03956 AC090617.8-201ENST00000623339 167 ntBASIC-0.56□□□□□ -2.5
MMP1P03956 SNORD114-14-201ENST00000362723 75 ntBASIC-0.57□□□□□ -2.5
MMP1P03956 MIR203A-201ENST00000384836 110 ntBASIC-0.57□□□□□ -2.5
MMP1P03956 AL031737.1-201ENST00000450125 223 ntBASIC-0.57□□□□□ -2.5
MMP1P03956 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.58□□□□□ -2.5
MMP1P03956 MIR3657-201ENST00000584818 117 ntBASIC-0.58□□□□□ -2.5
MMP1P03956 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.58□□□□□ -2.5
MMP1P03956 MIR6509-201ENST00000614603 85 ntBASIC-0.58□□□□□ -2.5
MMP1P03956 SNORA3B-201ENST00000391305 131 ntBASIC-0.59□□□□□ -2.5
MMP1P03956 AL603908.1-201ENST00000406098 201 ntBASIC-0.59□□□□□ -2.5
MMP1P03956 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.59□□□□□ -2.5
MMP1P03956 RNA5SP147-201ENST00000516493 109 ntBASIC-0.59□□□□□ -2.5
MMP1P03956 MIR6854-201ENST00000614935 69 ntBASIC-0.59□□□□□ -2.5
MMP1P03956 AP001318.4-201ENST00000616637 121 ntBASIC-0.59□□□□□ -2.5
MMP1P03956 RNU6-755P-201ENST00000364400 103 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 MIR204-201ENST00000385200 110 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
MMP1P03956 AL606753.1-201ENST00000427435 87 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 RNA5SP67-201ENST00000516422 131 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 MIR548AX-201ENST00000580117 73 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 U6.96-201ENST00000636425 70 ntBASIC-0.6□□□□□ -2.51
MMP1P03956 SNORA2.1-201ENST00000363089 137 ntBASIC-0.61□□□□□ -2.51
MMP1P03956 SNORA32.3-201ENST00000384772 121 ntBASIC-0.61□□□□□ -2.51
MMP1P03956 MIR519C-201ENST00000385053 87 ntBASIC-0.61□□□□□ -2.51
MMP1P03956 AL691482.2-201ENST00000457453 84 ntBASIC-0.61□□□□□ -2.51
MMP1P03956 RNU6-274P-201ENST00000459566 107 ntBASIC-0.61□□□□□ -2.51
MMP1P03956 YWHAEP3-201ENST00000582767 121 ntBASIC-0.61□□□□□ -2.51
MMP1P03956 RNU6-633P-201ENST00000362612 103 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 SNORA33.1-201ENST00000364957 130 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 MIR518B-201ENST00000385127 83 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 RNU6-721P-201ENST00000410155 105 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 SNORA13-201ENST00000458790 133 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 MIR4668-201ENST00000582284 70 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 MIR2052-201ENST00000636055 55 ntBASIC-0.62□□□□□ -2.51
MMP1P03956 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.63□□□□□ -2.51
MMP1P03956 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.63□□□□□ -2.51
MMP1P03956 RNU6-905P-201ENST00000384434 107 ntBASIC-0.63□□□□□ -2.51
MMP1P03956 SNORD22.1-201ENST00000516331 125 ntBASIC-0.63□□□□□ -2.51
MMP1P03956 MALAT1.1-201ENST00000618249 95 ntBASIC-0.63□□□□□ -2.51
MMP1P03956 snoR1.1-201ENST00000628177 80 ntBASIC-0.63□□□□□ -2.51
MMP1P03956 RNU6-208P-201ENST00000362431 107 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 RNU6-340P-201ENST00000364005 107 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 RNU6-497P-201ENST00000365316 104 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 SNORD75.1-201ENST00000408373 60 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 AL450471.1-201ENST00000447509 127 ntBASIC-0.64□□□□□ -2.51
MMP1P03956 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
MMP1P03956 SNORA63.4-201ENST00000362763 126 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 RNU6-219P-201ENST00000364728 107 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 AC021146.6-201ENST00000514659 117 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 SNORA40.13-201ENST00000516379 120 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 MIR3179-1-201ENST00000578940 84 ntBASIC-0.65□□□□□ -2.51
MMP1P03956 MIR3179-2-201ENST00000579107 84 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms