Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORD115-31-201ENST00000365318 82 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 SNORD90-201ENST00000391145 111 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 RNY3P15-201ENST00000516297 97 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 RNU6-974P-201ENST00000384099 108 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 MIR1302-6-201ENST00000408466 90 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 MIR3149-201ENST00000584629 83 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 SNORD116-2-201ENST00000384274 95 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 MTND1P19-201ENST00000511780 315 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 AL160413.1-201ENST00000622780 310 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 DEFB108C-201ENST00000400154 252 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.99□□□□□ -2.73
SPTA1P02549 RNU6-381P-201ENST00000391259 108 ntBASIC-2□□□□□ -2.73
SPTA1P02549 MIR429-201ENST00000362106 83 ntBASIC-2□□□□□ -2.73
SPTA1P02549 Y_RNA.292-201ENST00000364904 97 ntBASIC-2□□□□□ -2.73
SPTA1P02549 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-523P-201ENST00000516304 54 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 MIR3646-201ENST00000578301 84 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 AC013734.1-201ENST00000619329 111 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 MIR125B1-201ENST00000385236 88 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 SNORD113-2-201ENST00000391082 72 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-995P-201ENST00000391244 107 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-781P-201ENST00000516377 101 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Z99129.1-201ENST00000612510 255 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 U6.81-201ENST00000612550 106 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 MIR6844-201ENST00000637122 62 ntBASIC-2.01□□□□□ -2.73
SPTA1P02549 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 AC002553.4-201ENST00000616896 331 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 RPS29P30-201ENST00000600975 111 ntBASIC-2.02□□□□□ -2.73
SPTA1P02549 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 SNORD45B-201ENST00000364617 72 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 RNU6-1215P-201ENST00000384441 102 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 RNU6-460P-201ENST00000391158 108 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 AC104996.3-201ENST00000590718 94 ntBASIC-2.03□□□□□ -2.73
SPTA1P02549 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 SNORA41B-201ENST00000384785 128 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 RNY4P25-201ENST00000459254 96 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.03□□□□□ -2.74
SPTA1P02549 RNU6-834P-201ENST00000362367 110 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 MIR559-201ENST00000385188 96 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 RNU6-554P-201ENST00000410466 106 ntBASIC-2.04□□□□□ -2.74
SPTA1P02549 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.04□□□□□ -2.74
SPTA1P02549 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
SPTA1P02549 MIR4694-201ENST00000578534 80 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 SNORD115-37-201ENST00000363768 82 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 SNORD116-10-201ENST00000363791 102 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 RNU6-211P-201ENST00000384047 107 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 SNORA40.15-201ENST00000516884 107 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.05□□□□□ -2.74
SPTA1P02549 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 MIR579-201ENST00000385221 98 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 SNORD77.2-201ENST00000391045 68 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 SNORD116.3-201ENST00000517176 78 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 AC130289.1-201ENST00000577321 73 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 MIR4777-201ENST00000583710 86 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 AL603755.1-201ENST00000619504 163 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 MTND4LP32-201ENST00000636111 270 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 RNY3P2-201ENST00000362918 102 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 RNU6-972P-201ENST00000391208 107 ntBASIC-2.06□□□□□ -2.74
SPTA1P02549 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 RNU6-669P-201ENST00000365575 107 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MTND2P23-201ENST00000422990 651 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MTND4LP1-201ENST00000446263 157 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MTND5P22-201ENST00000458380 195 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 RNU7-61P-201ENST00000515897 61 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 MIR5693-201ENST00000577722 73 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 AC012531.4-201ENST00000616509 177 ntBASIC-2.07□□□□□ -2.74
SPTA1P02549 RNU6-598P-201ENST00000364017 105 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 RNU6-310P-201ENST00000384655 107 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 RNU7-121P-201ENST00000516604 62 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 MIR4796-201ENST00000580742 81 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 AC090971.5-201ENST00000621102 293 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 RNU6-624P-201ENST00000363411 107 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.08□□□□□ -2.74
SPTA1P02549 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms