Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-537P-201ENST00000517277 103 ntBASIC-1.13□□□□□ -2.59
GGPS1O95749 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.13□□□□□ -2.59
GGPS1O95749 AC008267.6-201ENST00000441664 139 ntBASIC-1.14□□□□□ -2.59
GGPS1O95749 AC026421.1-201ENST00000519101 163 ntBASIC-1.14□□□□□ -2.59
GGPS1O95749 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.15□□□□□ -2.59
GGPS1O95749 MIR590-201ENST00000385008 97 ntBASIC-1.15□□□□□ -2.59
GGPS1O95749 MIR196A1-201ENST00000388006 70 ntBASIC-1.15□□□□□ -2.59
GGPS1O95749 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.15□□□□□ -2.59
GGPS1O95749 SNORD74.6-201ENST00000364796 70 ntBASIC-1.16□□□□□ -2.6
GGPS1O95749 MIR8068-201ENST00000618032 68 ntBASIC-1.16□□□□□ -2.6
GGPS1O95749 U6.96-201ENST00000636425 70 ntBASIC-1.16□□□□□ -2.6
GGPS1O95749 MIR409-201ENST00000362237 79 ntBASIC-1.17□□□□□ -2.6
GGPS1O95749 AC022137.1-201ENST00000483735 151 ntBASIC-1.17□□□□□ -2.6
GGPS1O95749 RNU7-61P-201ENST00000515897 61 ntBASIC-1.17□□□□□ -2.6
GGPS1O95749 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 RNU6-824P-201ENST00000363724 104 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 MIR517B-201ENST00000385102 67 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 MIR4796-201ENST00000580742 81 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 MIR4773-1-201ENST00000637203 78 ntBASIC-1.18□□□□□ -2.6
GGPS1O95749 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.19□□□□□ -2.6
GGPS1O95749 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.19□□□□□ -2.6
GGPS1O95749 AP000533.3-201ENST00000447704 118 ntBASIC-1.19□□□□□ -2.6
GGPS1O95749 YWHAEP3-201ENST00000582767 121 ntBASIC-1.19□□□□□ -2.6
GGPS1O95749 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.19□□□□□ -2.6
GGPS1O95749 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.2□□□□□ -2.6
GGPS1O95749 RNU6-260P-201ENST00000384092 107 ntBASIC-1.2□□□□□ -2.6
GGPS1O95749 RNU6-554P-201ENST00000410466 106 ntBASIC-1.2□□□□□ -2.6
GGPS1O95749 snoU13.17-201ENST00000458802 104 ntBASIC-1.2□□□□□ -2.6
GGPS1O95749 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.21□□□□□ -2.6
GGPS1O95749 RNU6-81P-201ENST00000365608 104 ntBASIC-1.21□□□□□ -2.6
GGPS1O95749 SNORD114-25-201ENST00000363742 72 ntBASIC-1.22□□□□□ -2.6
GGPS1O95749 RNU6-106P-201ENST00000384405 107 ntBASIC-1.22□□□□□ -2.6
GGPS1O95749 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
GGPS1O95749 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.22□□□□□ -2.6
GGPS1O95749 MIR1236-201ENST00000408340 102 ntBASIC-1.22□□□□□ -2.6
GGPS1O95749 MIR6509-201ENST00000614603 85 ntBASIC-1.22□□□□□ -2.6
GGPS1O95749 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 SNORA62.4-201ENST00000365504 151 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 RNU6-274P-201ENST00000459566 107 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 U6.81-201ENST00000612550 106 ntBASIC-1.23□□□□□ -2.61
GGPS1O95749 SNORA2.1-201ENST00000363089 137 ntBASIC-1.24□□□□□ -2.61
GGPS1O95749 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.24□□□□□ -2.61
GGPS1O95749 RNU6-905P-201ENST00000384434 107 ntBASIC-1.24□□□□□ -2.61
GGPS1O95749 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.24□□□□□ -2.61
GGPS1O95749 SCARNA17-201ENST00000516183 144 ntBASIC-1.24□□□□□ -2.61
GGPS1O95749 AL365222.1-201ENST00000614661 98 ntBASIC-1.24□□□□□ -2.61
GGPS1O95749 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
GGPS1O95749 RNU6-109P-201ENST00000516364 107 ntBASIC-1.25□□□□□ -2.61
GGPS1O95749 RNA5SP67-201ENST00000516422 131 ntBASIC-1.25□□□□□ -2.61
GGPS1O95749 RNU6-184P-201ENST00000516514 107 ntBASIC-1.25□□□□□ -2.61
GGPS1O95749 U7.3-201ENST00000616123 62 ntBASIC-1.25□□□□□ -2.61
GGPS1O95749 AL627230.5-201ENST00000619807 58 ntBASIC-1.25□□□□□ -2.61
GGPS1O95749 AL691482.2-201ENST00000457453 84 ntBASIC-1.26□□□□□ -2.61
GGPS1O95749 MIR3657-201ENST00000584818 117 ntBASIC-1.26□□□□□ -2.61
GGPS1O95749 MIR6129-201ENST00000616087 109 ntBASIC-1.26□□□□□ -2.61
GGPS1O95749 AC090617.8-201ENST00000623339 167 ntBASIC-1.26□□□□□ -2.61
GGPS1O95749 SNORA19-201ENST00000384737 128 ntBASIC-1.27□□□□□ -2.61
GGPS1O95749 MIR203A-201ENST00000384836 110 ntBASIC-1.27□□□□□ -2.61
GGPS1O95749 RNA5SP147-201ENST00000516493 109 ntBASIC-1.27□□□□□ -2.61
GGPS1O95749 RNU6-834P-201ENST00000362367 110 ntBASIC-1.28□□□□□ -2.61
GGPS1O95749 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.28□□□□□ -2.61
GGPS1O95749 SNORD18.2-201ENST00000459604 70 ntBASIC-1.28□□□□□ -2.61
GGPS1O95749 RNU6-162P-201ENST00000516228 103 ntBASIC-1.28□□□□□ -2.61
GGPS1O95749 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.28□□□□□ -2.61
GGPS1O95749 RNU6-589P-201ENST00000516485 107 ntBASIC-1.29□□□□□ -2.62
GGPS1O95749 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.29□□□□□ -2.62
GGPS1O95749 RNU6-208P-201ENST00000362431 107 ntBASIC-1.3□□□□□ -2.62
GGPS1O95749 RNU6-766P-201ENST00000362478 107 ntBASIC-1.3□□□□□ -2.62
GGPS1O95749 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.3□□□□□ -2.62
GGPS1O95749 MT-TR-201ENST00000387439 65 ntBASIC-1.3□□□□□ -2.62
GGPS1O95749 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.3□□□□□ -2.62
GGPS1O95749 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.31□□□□□ -2.62
GGPS1O95749 SNORA33.1-201ENST00000364957 130 ntBASIC-1.31□□□□□ -2.62
GGPS1O95749 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.31□□□□□ -2.62
GGPS1O95749 AL353803.5-201ENST00000599815 141 ntBASIC-1.31□□□□□ -2.62
GGPS1O95749 RNA5SP470-201ENST00000516463 106 ntBASIC-1.32□□□□□ -2.62
GGPS1O95749 RNU6-158P-201ENST00000517104 100 ntBASIC-1.32□□□□□ -2.62
GGPS1O95749 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 RNA5SP331-201ENST00000364986 107 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 MIR124-2-201ENST00000385081 109 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 AL450471.1-201ENST00000447509 127 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 RNU6-752P-201ENST00000516376 102 ntBASIC-1.33□□□□□ -2.62
GGPS1O95749 RNU7-153P-201ENST00000516455 62 ntBASIC-1.34□□□□□ -2.62
GGPS1O95749 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.34□□□□□ -2.62
GGPS1O95749 RNU6-22P-201ENST00000384355 107 ntBASIC-1.35□□□□□ -2.63
GGPS1O95749 MIR548M-201ENST00000408260 86 ntBASIC-1.35□□□□□ -2.63
GGPS1O95749 AL500527.2-201ENST00000454105 95 ntBASIC-1.35□□□□□ -2.63
GGPS1O95749 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.36□□□□□ -2.63
GGPS1O95749 RNA5SP266-201ENST00000410273 108 ntBASIC-1.36□□□□□ -2.63
GGPS1O95749 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.36□□□□□ -2.63
GGPS1O95749 MIR4464-201ENST00000580818 92 ntBASIC-1.36□□□□□ -2.63
GGPS1O95749 MIR521-2-201ENST00000384818 87 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms