Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNA5SP128-201ENST00000365305 116 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 RNU6-540P-201ENST00000384622 101 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 MIR548E-201ENST00000408287 88 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 RNU6-863P-201ENST00000515989 104 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 RNU7-129P-201ENST00000516128 62 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
NPHS1O60500 RNU6-895P-201ENST00000384125 103 ntBASIC0.56□□□□□ -2.32
NPHS1O60500 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
NPHS1O60500 MIR499B-201ENST00000636498 73 ntBASIC0.56□□□□□ -2.32
NPHS1O60500 MIRLET7D-201ENST00000362263 87 ntBASIC0.55□□□□□ -2.32
NPHS1O60500 AC114801.3-201ENST00000510231 177 ntBASIC0.55□□□□□ -2.32
NPHS1O60500 AC021146.9-201ENST00000512503 156 ntBASIC0.55□□□□□ -2.32
NPHS1O60500 MIR548AD-201ENST00000584780 82 ntBASIC0.55□□□□□ -2.32
NPHS1O60500 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
NPHS1O60500 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
NPHS1O60500 MIR20A-201ENST00000362279 71 ntBASIC0.53□□□□□ -2.32
NPHS1O60500 SNORD30.1-201ENST00000391309 70 ntBASIC0.53□□□□□ -2.32
NPHS1O60500 RNU7-188P-201ENST00000517063 64 ntBASIC0.53□□□□□ -2.32
NPHS1O60500 RNU6-645P-201ENST00000364649 106 ntBASIC0.52□□□□□ -2.33
NPHS1O60500 SNORA63.6-201ENST00000364921 119 ntBASIC0.52□□□□□ -2.33
NPHS1O60500 RNU6-663P-201ENST00000391105 106 ntBASIC0.52□□□□□ -2.33
NPHS1O60500 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.52□□□□□ -2.33
NPHS1O60500 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
NPHS1O60500 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.52□□□□□ -2.33
NPHS1O60500 Y_RNA.250-201ENST00000364542 110 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 SNORD114-29-201ENST00000364819 70 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 RNU6-649P-201ENST00000384463 107 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 AC244090.1-201ENST00000441884 93 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 Y_RNA.633-201ENST00000459107 95 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 MIR3925-201ENST00000584674 77 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 AC022709.1-201ENST00000615967 87 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 MIR7111-201ENST00000619751 72 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 AC084368.1-201ENST00000620935 65 ntBASIC0.51□□□□□ -2.33
NPHS1O60500 RNU6-1216P-201ENST00000362590 107 ntBASIC0.5□□□□□ -2.33
NPHS1O60500 RNU6-815P-201ENST00000384080 113 ntBASIC0.5□□□□□ -2.33
NPHS1O60500 SNORD116-24-201ENST00000384549 92 ntBASIC0.5□□□□□ -2.33
NPHS1O60500 MIR598-201ENST00000384868 97 ntBASIC0.5□□□□□ -2.33
NPHS1O60500 RNU6-656P-201ENST00000516785 107 ntBASIC0.5□□□□□ -2.33
NPHS1O60500 MIR489-201ENST00000384923 84 ntBASIC0.49□□□□□ -2.33
NPHS1O60500 AC139453.2-201ENST00000487255 133 ntBASIC0.49□□□□□ -2.33
NPHS1O60500 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
NPHS1O60500 SNORA9.1-201ENST00000362412 131 ntBASIC0.48□□□□□ -2.33
NPHS1O60500 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
NPHS1O60500 RNU6-539P-201ENST00000516665 103 ntBASIC0.48□□□□□ -2.33
NPHS1O60500 RNU6-175P-201ENST00000516896 107 ntBASIC0.48□□□□□ -2.33
NPHS1O60500 RNA5SP62-201ENST00000363457 110 ntBASIC0.47□□□□□ -2.33
NPHS1O60500 SNORA33.1-201ENST00000364957 130 ntBASIC0.47□□□□□ -2.33
NPHS1O60500 RNU6-1162P-201ENST00000384443 104 ntBASIC0.47□□□□□ -2.33
NPHS1O60500 MIR521-2-201ENST00000384818 87 ntBASIC0.47□□□□□ -2.33
NPHS1O60500 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
NPHS1O60500 RNU6-127P-201ENST00000390897 107 ntBASIC0.46□□□□□ -2.34
NPHS1O60500 MTND4LP1-201ENST00000446263 157 ntBASIC0.46□□□□□ -2.34
NPHS1O60500 RN7SL660P-201ENST00000614852 299 ntBASIC0.46□□□□□ -2.34
NPHS1O60500 U6.111-201ENST00000636093 83 ntBASIC0.46□□□□□ -2.34
NPHS1O60500 SNORA15B-2-201ENST00000384058 135 ntBASIC0.45□□□□□ -2.34
NPHS1O60500 SNORA15B-1-201ENST00000384334 135 ntBASIC0.45□□□□□ -2.34
NPHS1O60500 RNA5SP436-201ENST00000516020 115 ntBASIC0.45□□□□□ -2.34
NPHS1O60500 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
NPHS1O60500 RNU6-668P-201ENST00000364180 107 ntBASIC0.44□□□□□ -2.34
NPHS1O60500 RNU6-630P-201ENST00000391258 106 ntBASIC0.44□□□□□ -2.34
NPHS1O60500 MIR876-201ENST00000401147 81 ntBASIC0.44□□□□□ -2.34
NPHS1O60500 SCARNA11.2-201ENST00000517183 154 ntBASIC0.44□□□□□ -2.34
NPHS1O60500 MIR6513-201ENST00000621188 64 ntBASIC0.44□□□□□ -2.34
NPHS1O60500 SNORA49-201ENST00000386157 136 ntBASIC0.43□□□□□ -2.34
NPHS1O60500 AC069113.3-201ENST00000521019 150 ntBASIC0.43□□□□□ -2.34
NPHS1O60500 AL109933.3-201ENST00000619095 188 ntBASIC0.43□□□□□ -2.34
NPHS1O60500 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
NPHS1O60500 RNU6-1036P-201ENST00000383959 104 ntBASIC0.42□□□□□ -2.34
NPHS1O60500 Y_RNA.443-201ENST00000384135 111 ntBASIC0.42□□□□□ -2.34
NPHS1O60500 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
NPHS1O60500 U6.96-201ENST00000636425 70 ntBASIC0.42□□□□□ -2.34
NPHS1O60500 RNU6-800P-201ENST00000384473 103 ntBASIC0.41□□□□□ -2.34
NPHS1O60500 MIR643-201ENST00000385267 97 ntBASIC0.41□□□□□ -2.34
NPHS1O60500 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
NPHS1O60500 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
NPHS1O60500 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
NPHS1O60500 SNORA75.1-201ENST00000391130 148 ntBASIC0.4□□□□□ -2.35
NPHS1O60500 RNU6-782P-201ENST00000516852 104 ntBASIC0.4□□□□□ -2.35
NPHS1O60500 AC005520.4-201ENST00000604337 90 ntBASIC0.4□□□□□ -2.35
NPHS1O60500 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
NPHS1O60500 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
NPHS1O60500 Y_RNA.386-201ENST00000383913 105 ntBASIC0.39□□□□□ -2.35
NPHS1O60500 SNORD2-201ENST00000459163 69 ntBASIC0.39□□□□□ -2.35
NPHS1O60500 AC108740.1-201ENST00000498629 225 ntBASIC0.39□□□□□ -2.35
NPHS1O60500 SNORD114-23-201ENST00000363536 72 ntBASIC0.38□□□□□ -2.35
NPHS1O60500 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
NPHS1O60500 RNU6-1089P-201ENST00000516473 104 ntBASIC0.38□□□□□ -2.35
NPHS1O60500 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
NPHS1O60500 PVT1_3.1-201ENST00000620853 95 ntBASIC0.38□□□□□ -2.35
NPHS1O60500 AC090617.8-201ENST00000623339 167 ntBASIC0.38□□□□□ -2.35
NPHS1O60500 SNORA25.4-201ENST00000363666 124 ntBASIC0.37□□□□□ -2.35
NPHS1O60500 MIR548C-201ENST00000384815 97 ntBASIC0.37□□□□□ -2.35
NPHS1O60500 RNU6-590P-201ENST00000365039 107 ntBASIC0.35□□□□□ -2.35
NPHS1O60500 RNU6-337P-201ENST00000391243 106 ntBASIC0.35□□□□□ -2.35
NPHS1O60500 RNA5SP480-201ENST00000516840 109 ntBASIC0.35□□□□□ -2.35
NPHS1O60500 CYP3A54P-201ENST00000566950 75 ntBASIC0.35□□□□□ -2.35
NPHS1O60500 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
NPHS1O60500 MIR6773-201ENST00000612812 74 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms