Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 HMGN2P22-201ENST00000427588 175 ntBASIC0.63□□□□□ -2.31
SHOXO15266 RNU6-634P-201ENST00000459134 106 ntBASIC0.63□□□□□ -2.31
SHOXO15266 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
SHOXO15266 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
SHOXO15266 MIR652-201ENST00000385278 98 ntBASIC0.62□□□□□ -2.31
SHOXO15266 RNU6-604P-201ENST00000390917 100 ntBASIC0.62□□□□□ -2.31
SHOXO15266 MIR3973-201ENST00000579824 107 ntBASIC0.62□□□□□ -2.31
SHOXO15266 MIR548AE1-201ENST00000583292 70 ntBASIC0.62□□□□□ -2.31
SHOXO15266 RNA5SP257-201ENST00000363023 116 ntBASIC0.61□□□□□ -2.31
SHOXO15266 RNU6-895P-201ENST00000384125 103 ntBASIC0.61□□□□□ -2.31
SHOXO15266 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
SHOXO15266 MIR8087-201ENST00000612745 78 ntBASIC0.61□□□□□ -2.31
SHOXO15266 MIR6767-201ENST00000637302 66 ntBASIC0.61□□□□□ -2.31
SHOXO15266 SNORD114-29-201ENST00000364819 70 ntBASIC0.6□□□□□ -2.31
SHOXO15266 RNA5SP128-201ENST00000365305 116 ntBASIC0.6□□□□□ -2.31
SHOXO15266 RNU6-523P-201ENST00000516304 54 ntBASIC0.6□□□□□ -2.31
SHOXO15266 AL109933.3-201ENST00000619095 188 ntBASIC0.6□□□□□ -2.31
SHOXO15266 MIR6755-201ENST00000619993 66 ntBASIC0.6□□□□□ -2.31
SHOXO15266 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
SHOXO15266 MIR20A-201ENST00000362279 71 ntBASIC0.59□□□□□ -2.31
SHOXO15266 RNU6-990P-201ENST00000364385 104 ntBASIC0.59□□□□□ -2.31
SHOXO15266 AC244090.1-201ENST00000441884 93 ntBASIC0.59□□□□□ -2.31
SHOXO15266 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
SHOXO15266 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
SHOXO15266 SNORD44.1-201ENST00000363202 61 ntBASIC0.58□□□□□ -2.32
SHOXO15266 SNORA63.6-201ENST00000364921 119 ntBASIC0.58□□□□□ -2.32
SHOXO15266 SNORD2-201ENST00000459163 69 ntBASIC0.58□□□□□ -2.32
SHOXO15266 RNU6-881P-201ENST00000516813 102 ntBASIC0.58□□□□□ -2.32
SHOXO15266 MIR516B1-201ENST00000385211 90 ntBASIC0.57□□□□□ -2.32
SHOXO15266 AC021146.9-201ENST00000512503 156 ntBASIC0.57□□□□□ -2.32
SHOXO15266 RNU7-129P-201ENST00000516128 62 ntBASIC0.57□□□□□ -2.32
SHOXO15266 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
SHOXO15266 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
SHOXO15266 MIR501-201ENST00000390204 84 ntBASIC0.56□□□□□ -2.32
SHOXO15266 MIR936-201ENST00000401264 98 ntBASIC0.56□□□□□ -2.32
SHOXO15266 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
SHOXO15266 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
SHOXO15266 MIR4677-201ENST00000584153 80 ntBASIC0.56□□□□□ -2.32
SHOXO15266 MIR548AD-201ENST00000584780 82 ntBASIC0.56□□□□□ -2.32
SHOXO15266 SNORA9.1-201ENST00000362412 131 ntBASIC0.55□□□□□ -2.32
SHOXO15266 SNORD115-22-201ENST00000364456 82 ntBASIC0.55□□□□□ -2.32
SHOXO15266 RNU6-1162P-201ENST00000384443 104 ntBASIC0.55□□□□□ -2.32
SHOXO15266 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
SHOXO15266 MTND4LP1-201ENST00000446263 157 ntBASIC0.55□□□□□ -2.32
SHOXO15266 RNA5SP147-201ENST00000516493 109 ntBASIC0.55□□□□□ -2.32
SHOXO15266 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
SHOXO15266 AC084368.1-201ENST00000620935 65 ntBASIC0.55□□□□□ -2.32
SHOXO15266 MIRLET7D-201ENST00000362263 87 ntBASIC0.54□□□□□ -2.32
SHOXO15266 MIR373-201ENST00000362273 69 ntBASIC0.54□□□□□ -2.32
SHOXO15266 SNORA15B-2-201ENST00000384058 135 ntBASIC0.54□□□□□ -2.32
SHOXO15266 SNORA15B-1-201ENST00000384334 135 ntBASIC0.54□□□□□ -2.32
SHOXO15266 SNORD45A-201ENST00000384512 84 ntBASIC0.54□□□□□ -2.32
SHOXO15266 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
SHOXO15266 MIR330-201ENST00000362196 94 ntBASIC0.53□□□□□ -2.32
SHOXO15266 SNORD113.1-201ENST00000363280 73 ntBASIC0.53□□□□□ -2.32
SHOXO15266 MIR508-201ENST00000384857 115 ntBASIC0.53□□□□□ -2.32
SHOXO15266 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
SHOXO15266 AC090625.1-201ENST00000357130 210 ntBASIC0.52□□□□□ -2.33
SHOXO15266 RNU6-1216P-201ENST00000362590 107 ntBASIC0.52□□□□□ -2.33
SHOXO15266 SNORD115-31-201ENST00000365318 82 ntBASIC0.52□□□□□ -2.33
SHOXO15266 RNU6-649P-201ENST00000384463 107 ntBASIC0.52□□□□□ -2.33
SHOXO15266 SNORD30.1-201ENST00000391309 70 ntBASIC0.52□□□□□ -2.33
SHOXO15266 MIR548E-201ENST00000408287 88 ntBASIC0.52□□□□□ -2.33
SHOXO15266 AC114801.3-201ENST00000510231 177 ntBASIC0.52□□□□□ -2.33
SHOXO15266 RNU6-1232P-201ENST00000516299 86 ntBASIC0.52□□□□□ -2.33
SHOXO15266 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
SHOXO15266 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
SHOXO15266 RNU6-35P-201ENST00000384530 107 ntBASIC0.51□□□□□ -2.33
SHOXO15266 RNU6-663P-201ENST00000391105 106 ntBASIC0.51□□□□□ -2.33
SHOXO15266 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
SHOXO15266 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.51□□□□□ -2.33
SHOXO15266 SNORA75.1-201ENST00000391130 148 ntBASIC0.5□□□□□ -2.33
SHOXO15266 RNU6-539P-201ENST00000516665 103 ntBASIC0.5□□□□□ -2.33
SHOXO15266 RNU7-188P-201ENST00000517063 64 ntBASIC0.5□□□□□ -2.33
SHOXO15266 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
SHOXO15266 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
SHOXO15266 RNU6-645P-201ENST00000364649 106 ntBASIC0.49□□□□□ -2.33
SHOXO15266 RNU6-540P-201ENST00000384622 101 ntBASIC0.49□□□□□ -2.33
SHOXO15266 MIR521-2-201ENST00000384818 87 ntBASIC0.49□□□□□ -2.33
SHOXO15266 MIR1197-201ENST00000408818 88 ntBASIC0.49□□□□□ -2.33
SHOXO15266 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
SHOXO15266 SNORA40.17-201ENST00000517256 115 ntBASIC0.49□□□□□ -2.33
SHOXO15266 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.49□□□□□ -2.33
SHOXO15266 MIR499B-201ENST00000636498 73 ntBASIC0.48□□□□□ -2.33
SHOXO15266 RNU6-668P-201ENST00000364180 107 ntBASIC0.47□□□□□ -2.33
SHOXO15266 MIR582-201ENST00000365731 98 ntBASIC0.47□□□□□ -2.33
SHOXO15266 snoU13.13-201ENST00000458842 104 ntBASIC0.47□□□□□ -2.33
SHOXO15266 HAR1A.1-201ENST00000459583 118 ntBASIC0.47□□□□□ -2.33
SHOXO15266 RNU6-1327P-201ENST00000365302 105 ntBASIC0.46□□□□□ -2.34
SHOXO15266 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
SHOXO15266 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
SHOXO15266 MIR876-201ENST00000401147 81 ntBASIC0.45□□□□□ -2.34
SHOXO15266 Y_RNA.633-201ENST00000459107 95 ntBASIC0.45□□□□□ -2.34
SHOXO15266 RNU6-982P-201ENST00000516216 102 ntBASIC0.45□□□□□ -2.34
SHOXO15266 MIR6086-201ENST00000638065 55 ntBASIC0.45□□□□□ -2.34
SHOXO15266 RNA5SP285-201ENST00000516619 119 ntBASIC0.44□□□□□ -2.34
SHOXO15266 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
SHOXO15266 RNU6-782P-201ENST00000516852 104 ntBASIC0.43□□□□□ -2.34
SHOXO15266 SCARNA11.2-201ENST00000517183 154 ntBASIC0.43□□□□□ -2.34
SHOXO15266 AC069113.3-201ENST00000521019 150 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 280.6 ms