Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 MIR548E-201ENST00000408287 88 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 MIR1265-201ENST00000408444 86 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 MIR4698-201ENST00000577795 80 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 AC103706.3-201ENST00000636297 85 ntBASIC0.71□□□□□ -2.3
SHISA3A0PJX4 SNORD2-201ENST00000459163 69 ntBASIC0.7□□□□□ -2.3
SHISA3A0PJX4 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
SHISA3A0PJX4 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
SHISA3A0PJX4 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
SHISA3A0PJX4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.69□□□□□ -2.3
SHISA3A0PJX4 SNORD114-29-201ENST00000364819 70 ntBASIC0.69□□□□□ -2.3
SHISA3A0PJX4 MIR582-201ENST00000365731 98 ntBASIC0.69□□□□□ -2.3
SHISA3A0PJX4 MIR6788-201ENST00000618842 66 ntBASIC0.69□□□□□ -2.3
SHISA3A0PJX4 MIR6755-201ENST00000619993 66 ntBASIC0.69□□□□□ -2.3
SHISA3A0PJX4 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
SHISA3A0PJX4 RNA5SP215-201ENST00000363440 122 ntBASIC0.68□□□□□ -2.3
SHISA3A0PJX4 Y_RNA.375-201ENST00000365625 101 ntBASIC0.68□□□□□ -2.3
SHISA3A0PJX4 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
SHISA3A0PJX4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
SHISA3A0PJX4 snoU13.13-201ENST00000458842 104 ntBASIC0.68□□□□□ -2.3
SHISA3A0PJX4 MIR4511-201ENST00000582784 87 ntBASIC0.68□□□□□ -2.3
SHISA3A0PJX4 RNU6-542P-201ENST00000516405 103 ntBASIC0.67□□□□□ -2.3
SHISA3A0PJX4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
SHISA3A0PJX4 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
SHISA3A0PJX4 MIR516B1-201ENST00000385211 90 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 MIR501-201ENST00000390204 84 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 MIR760-201ENST00000390220 80 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 MIR548J-201ENST00000408833 112 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 RNU6-1089P-201ENST00000516473 104 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 MIR4677-201ENST00000584153 80 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 MIR548AD-201ENST00000584780 82 ntBASIC0.66□□□□□ -2.3
SHISA3A0PJX4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SHISA3A0PJX4 RNA5SP128-201ENST00000365305 116 ntBASIC0.64□□□□□ -2.31
SHISA3A0PJX4 AL157398.1-201ENST00000452981 186 ntBASIC0.64□□□□□ -2.31
SHISA3A0PJX4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
SHISA3A0PJX4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SHISA3A0PJX4 MIR373-201ENST00000362273 69 ntBASIC0.63□□□□□ -2.31
SHISA3A0PJX4 SNORD44.1-201ENST00000363202 61 ntBASIC0.63□□□□□ -2.31
SHISA3A0PJX4 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
SHISA3A0PJX4 SNORA33.1-201ENST00000364957 130 ntBASIC0.62□□□□□ -2.31
SHISA3A0PJX4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.62□□□□□ -2.31
SHISA3A0PJX4 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
SHISA3A0PJX4 AL109933.3-201ENST00000619095 188 ntBASIC0.62□□□□□ -2.31
SHISA3A0PJX4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
SHISA3A0PJX4 RNU6-302P-201ENST00000365249 107 ntBASIC0.61□□□□□ -2.31
SHISA3A0PJX4 RNU7-188P-201ENST00000517063 64 ntBASIC0.61□□□□□ -2.31
SHISA3A0PJX4 MIR7111-201ENST00000619751 72 ntBASIC0.61□□□□□ -2.31
SHISA3A0PJX4 AC084368.1-201ENST00000620935 65 ntBASIC0.61□□□□□ -2.31
SHISA3A0PJX4 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
SHISA3A0PJX4 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
SHISA3A0PJX4 AC022709.1-201ENST00000615967 87 ntBASIC0.6□□□□□ -2.31
SHISA3A0PJX4 MIR6515-201ENST00000619843 57 ntBASIC0.6□□□□□ -2.31
SHISA3A0PJX4 MIR489-201ENST00000384923 84 ntBASIC0.59□□□□□ -2.31
SHISA3A0PJX4 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
SHISA3A0PJX4 U6.96-201ENST00000636425 70 ntBASIC0.59□□□□□ -2.31
SHISA3A0PJX4 RNU6-669P-201ENST00000365575 107 ntBASIC0.58□□□□□ -2.32
SHISA3A0PJX4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SHISA3A0PJX4 RNA5SP299-201ENST00000391203 116 ntBASIC0.58□□□□□ -2.32
SHISA3A0PJX4 MIR876-201ENST00000401147 81 ntBASIC0.58□□□□□ -2.32
SHISA3A0PJX4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.57□□□□□ -2.32
SHISA3A0PJX4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.57□□□□□ -2.32
SHISA3A0PJX4 SNORA68.3-201ENST00000515906 83 ntBASIC0.57□□□□□ -2.32
SHISA3A0PJX4 MIR6835-201ENST00000621552 64 ntBASIC0.57□□□□□ -2.32
SHISA3A0PJX4 MIRLET7D-201ENST00000362263 87 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 SNORA9.1-201ENST00000362412 131 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 MIR598-201ENST00000384868 97 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 SNORA75.1-201ENST00000391130 148 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 RNU7-129P-201ENST00000516128 62 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 RNU6-175P-201ENST00000516896 107 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 U2.7-201ENST00000619197 100 ntBASIC0.56□□□□□ -2.32
SHISA3A0PJX4 MIR548C-201ENST00000384815 97 ntBASIC0.55□□□□□ -2.32
SHISA3A0PJX4 MIR517B-201ENST00000385102 67 ntBASIC0.55□□□□□ -2.32
SHISA3A0PJX4 AC110620.1-201ENST00000416042 228 ntBASIC0.55□□□□□ -2.32
SHISA3A0PJX4 SCARNA21.1-201ENST00000515996 128 ntBASIC0.55□□□□□ -2.32
SHISA3A0PJX4 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
SHISA3A0PJX4 RNU7-174P-201ENST00000516248 59 ntBASIC0.54□□□□□ -2.32
SHISA3A0PJX4 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
SHISA3A0PJX4 MIR499B-201ENST00000636498 73 ntBASIC0.54□□□□□ -2.32
SHISA3A0PJX4 RNU6-698P-201ENST00000363523 107 ntBASIC0.53□□□□□ -2.32
SHISA3A0PJX4 RNU6-34P-201ENST00000364874 107 ntBASIC0.53□□□□□ -2.32
SHISA3A0PJX4 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
SHISA3A0PJX4 SNORA49-201ENST00000386157 136 ntBASIC0.53□□□□□ -2.32
SHISA3A0PJX4 MIR3925-201ENST00000584674 77 ntBASIC0.53□□□□□ -2.32
SHISA3A0PJX4 MIR103A1-201ENST00000362165 78 ntBASIC0.52□□□□□ -2.33
SHISA3A0PJX4 CYP3A54P-201ENST00000566950 75 ntBASIC0.52□□□□□ -2.33
SHISA3A0PJX4 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
SHISA3A0PJX4 MIR106A-201ENST00000384870 81 ntBASIC0.51□□□□□ -2.33
SHISA3A0PJX4 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
SHISA3A0PJX4 MIR548V-201ENST00000584165 80 ntBASIC0.51□□□□□ -2.33
SHISA3A0PJX4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.51□□□□□ -2.33
SHISA3A0PJX4 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
SHISA3A0PJX4 SNORA25.5-201ENST00000363782 126 ntBASIC0.5□□□□□ -2.33
SHISA3A0PJX4 SNORD113-2-201ENST00000391082 72 ntBASIC0.5□□□□□ -2.33
SHISA3A0PJX4 AL021921.1-201ENST00000442774 93 ntBASIC0.5□□□□□ -2.33
SHISA3A0PJX4 RNU6-782P-201ENST00000516852 104 ntBASIC0.5□□□□□ -2.33
SHISA3A0PJX4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms