Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MTATP6P29-201ENST00000415057 132 ntBASIC0.26□□□□□ -2.37
VPS4AQ9UN37 SNORA25.13-201ENST00000516395 103 ntBASIC0.26□□□□□ -2.37
VPS4AQ9UN37 RNU6-267P-201ENST00000516714 103 ntBASIC0.26□□□□□ -2.37
VPS4AQ9UN37 MIR5582-201ENST00000579697 68 ntBASIC0.26□□□□□ -2.37
VPS4AQ9UN37 MIR3140-201ENST00000583685 90 ntBASIC0.26□□□□□ -2.37
VPS4AQ9UN37 Y_RNA.17-201ENST00000362433 111 ntBASIC0.25□□□□□ -2.37
VPS4AQ9UN37 RNY4P3-201ENST00000365254 95 ntBASIC0.25□□□□□ -2.37
VPS4AQ9UN37 RNU7-153P-201ENST00000516455 62 ntBASIC0.25□□□□□ -2.37
VPS4AQ9UN37 RNU6-782P-201ENST00000516852 104 ntBASIC0.25□□□□□ -2.37
VPS4AQ9UN37 MIR6759-201ENST00000638110 65 ntBASIC0.25□□□□□ -2.37
VPS4AQ9UN37 RNU6-127P-201ENST00000390897 107 ntBASIC0.24□□□□□ -2.37
VPS4AQ9UN37 Y_RNA.593-201ENST00000410292 98 ntBASIC0.24□□□□□ -2.37
VPS4AQ9UN37 MIR499B-201ENST00000636498 73 ntBASIC0.24□□□□□ -2.37
VPS4AQ9UN37 SNORA42.1-201ENST00000363515 137 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 RNU6V-201ENST00000384105 107 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 FGF7P7-201ENST00000514120 227 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 RNU5B-6P-201ENST00000516765 68 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 RNA5SP170-201ENST00000517150 101 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
VPS4AQ9UN37 Y_RNA.437-201ENST00000384113 113 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 MIR548H2-201ENST00000408874 88 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 RNU6-1052P-201ENST00000411398 104 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 RNU6-719P-201ENST00000516671 104 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 MIR4636-201ENST00000582271 80 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 MIR3925-201ENST00000584674 77 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 MIR548BB-201ENST00000626714 66 ntBASIC0.22□□□□□ -2.37
VPS4AQ9UN37 RNU6-624P-201ENST00000363411 107 ntBASIC0.21□□□□□ -2.38
VPS4AQ9UN37 MIR876-201ENST00000401147 81 ntBASIC0.21□□□□□ -2.38
VPS4AQ9UN37 MIR548AE1-201ENST00000583292 70 ntBASIC0.21□□□□□ -2.38
VPS4AQ9UN37 RNU6-495P-201ENST00000362995 107 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 Y_RNA.407-201ENST00000383986 113 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 snoU13.17-201ENST00000458802 104 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 RNU7-24P-201ENST00000458867 62 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 AC093729.1-201ENST00000513074 128 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 MIR6718-201ENST00000616153 80 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 uc_338.10-201ENST00000621872 182 ntBASIC0.2□□□□□ -2.38
VPS4AQ9UN37 RNU6-294P-201ENST00000364999 102 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 RNU6-1134P-201ENST00000365156 101 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 RNU6-652P-201ENST00000365488 107 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 RNU6-54P-201ENST00000365563 107 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 RNU6-1177P-201ENST00000391058 104 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 AC140658.3-201ENST00000567603 271 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 MIR5589-201ENST00000579442 60 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 MIR5190-201ENST00000581537 80 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 MIR4473-201ENST00000583731 91 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 MIR4743-201ENST00000584576 69 ntBASIC0.19□□□□□ -2.38
VPS4AQ9UN37 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
VPS4AQ9UN37 RNU7-129P-201ENST00000516128 62 ntBASIC0.18□□□□□ -2.38
VPS4AQ9UN37 SNORD42B-201ENST00000458893 67 ntBASIC0.17□□□□□ -2.38
VPS4AQ9UN37 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.17□□□□□ -2.38
VPS4AQ9UN37 RNU5F-1-201ENST00000362507 117 ntBASIC0.16□□□□□ -2.38
VPS4AQ9UN37 MIR516B1-201ENST00000385211 90 ntBASIC0.16□□□□□ -2.38
VPS4AQ9UN37 AC097510.1-201ENST00000510945 133 ntBASIC0.16□□□□□ -2.38
VPS4AQ9UN37 Y_RNA.43-201ENST00000362670 111 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 SNORD115-37-201ENST00000363768 82 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 MIR652-201ENST00000385278 98 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 SNORD75.2-201ENST00000408784 58 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 AC006160.2-201ENST00000637708 154 ntBASIC0.15□□□□□ -2.39
VPS4AQ9UN37 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
VPS4AQ9UN37 RNU6-824P-201ENST00000363724 104 ntBASIC0.14□□□□□ -2.39
VPS4AQ9UN37 Y_RNA.185-201ENST00000363894 100 ntBASIC0.14□□□□□ -2.39
VPS4AQ9UN37 RNU6-979P-201ENST00000383896 107 ntBASIC0.14□□□□□ -2.39
VPS4AQ9UN37 RNU6-592P-201ENST00000411333 103 ntBASIC0.14□□□□□ -2.39
VPS4AQ9UN37 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.14□□□□□ -2.39
VPS4AQ9UN37 RNU6-154P-201ENST00000384306 106 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 SNORA75.1-201ENST00000391130 148 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 Y_RNA.606-201ENST00000410579 103 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 Y_RNA.611-201ENST00000410682 108 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 SCARNA17.3-201ENST00000516381 125 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 RNU6-557P-201ENST00000516842 110 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 SCARNA11.2-201ENST00000517183 154 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 MIR4802-201ENST00000581881 80 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 U6.81-201ENST00000612550 106 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 IGLL4P-201ENST00000614590 133 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 AC084368.1-201ENST00000620935 65 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
VPS4AQ9UN37 RNU6-1255P-201ENST00000363434 112 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 SNORD114-4-201ENST00000363962 75 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 RNY1P1-201ENST00000364372 112 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 MIR450A2-201ENST00000385022 100 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 MIR643-201ENST00000385267 97 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 MIR892B-201ENST00000401279 77 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 RNU6-180P-201ENST00000516697 61 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 MIR5588-201ENST00000581890 63 ntBASIC0.12□□□□□ -2.39
VPS4AQ9UN37 MIR610-201ENST00000385139 96 ntBASIC0.11□□□□□ -2.39
VPS4AQ9UN37 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
VPS4AQ9UN37 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.11□□□□□ -2.39
VPS4AQ9UN37 RNU7-188P-201ENST00000517063 64 ntBASIC0.11□□□□□ -2.39
VPS4AQ9UN37 RN7SL660P-201ENST00000614852 299 ntBASIC0.11□□□□□ -2.39
VPS4AQ9UN37 RNA5SP98-201ENST00000363158 137 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 SNORD114-29-201ENST00000364819 70 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 RNU6-382P-201ENST00000365181 106 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 MIR106A-201ENST00000384870 81 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 SNORD77.2-201ENST00000391045 68 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 Y_RNA.607-201ENST00000410597 98 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 AC244090.1-201ENST00000441884 93 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 337.3 ms