Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 SNORD116-17-201ENST00000383929 92 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 SNORD116-15-201ENST00000384445 92 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 SNORD116-19-201ENST00000384729 92 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 MIR548U-201ENST00000390728 81 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-719P-201ENST00000516671 104 ntBASIC-0.6□□□□□ -2.51
UBQLN1Q9UMX0 RNU4-36P-201ENST00000364294 144 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 SNORA40.17-201ENST00000517256 115 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 MIR548Z-201ENST00000584743 97 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 AC104996.3-201ENST00000590718 94 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 AC012531.4-201ENST00000616509 177 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 AC093726.3-201ENST00000637588 150 ntBASIC-0.61□□□□□ -2.51
UBQLN1Q9UMX0 SNORA24B-201ENST00000384176 131 ntBASIC-0.62□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-880P-201ENST00000384526 107 ntBASIC-0.62□□□□□ -2.51
UBQLN1Q9UMX0 MIR4436A-201ENST00000585278 85 ntBASIC-0.62□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-495P-201ENST00000362995 107 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-209P-201ENST00000384118 107 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 snoU13.13-201ENST00000458842 104 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 AC097510.1-201ENST00000510945 133 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-795P-201ENST00000516323 103 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 MIR3671-201ENST00000580455 88 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 MIR4280-201ENST00000582178 76 ntBASIC-0.63□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.64□□□□□ -2.51
UBQLN1Q9UMX0 MIR3140-201ENST00000583685 90 ntBASIC-0.64□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-704P-201ENST00000364162 103 ntBASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-904P-201ENST00000516206 101 ntBASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-412P-201ENST00000516434 106 ntBASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 RNU6-62P-201ENST00000516526 102 ntBASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 MIR3133-201ENST00000583157 78 ntBASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.65□□□□□ -2.51
UBQLN1Q9UMX0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.66□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.66□□□□□ -2.52
UBQLN1Q9UMX0 SNORD116-21-201ENST00000384507 92 ntBASIC-0.66□□□□□ -2.52
UBQLN1Q9UMX0 SNORD57-201ENST00000448188 72 ntBASIC-0.66□□□□□ -2.52
UBQLN1Q9UMX0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.66□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-476P-201ENST00000384726 107 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 RNA5SP292-201ENST00000390974 118 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-519P-201ENST00000410590 108 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 SNORA19.1-201ENST00000410656 129 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 RNU7-24P-201ENST00000458867 62 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 SCARNA23-201ENST00000516060 130 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 RNY1P9-201ENST00000532431 109 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 MIR6851-201ENST00000617060 67 ntBASIC-0.67□□□□□ -2.52
UBQLN1Q9UMX0 SNORD58A-201ENST00000383875 65 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-746P-201ENST00000384112 109 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 MIR204-201ENST00000385200 110 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 SNORA3B-201ENST00000391305 131 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.68□□□□□ -2.52
UBQLN1Q9UMX0 SNORA63.6-201ENST00000364921 119 ntBASIC-0.69□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-972P-201ENST00000391208 107 ntBASIC-0.69□□□□□ -2.52
UBQLN1Q9UMX0 SNORD90-201ENST00000391145 111 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 SNORD75.2-201ENST00000408784 58 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-887P-201ENST00000410660 100 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 SNORA18.5-201ENST00000516616 101 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-537P-201ENST00000517277 103 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 MIR3668-201ENST00000582138 75 ntBASIC-0.7□□□□□ -2.52
UBQLN1Q9UMX0 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.71□□□□□ -2.52
UBQLN1Q9UMX0 RNY1P7-201ENST00000384743 110 ntBASIC-0.71□□□□□ -2.52
UBQLN1Q9UMX0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.71□□□□□ -2.52
UBQLN1Q9UMX0 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-774P-201ENST00000363238 107 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 RNU6-959P-201ENST00000384671 107 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 MIR196A1-201ENST00000388006 70 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 SNORA13-201ENST00000458790 133 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 MIR6773-201ENST00000612812 74 ntBASIC-0.72□□□□□ -2.52
UBQLN1Q9UMX0 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.73□□□□□ -2.53
UBQLN1Q9UMX0 RNU6-990P-201ENST00000364385 104 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 RNU6-337P-201ENST00000391243 106 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 MTATP6P29-201ENST00000415057 132 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 MIR5704-201ENST00000584029 77 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.74□□□□□ -2.53
UBQLN1Q9UMX0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.75□□□□□ -2.53
UBQLN1Q9UMX0 MIRLET7B-201ENST00000385140 83 ntBASIC-0.75□□□□□ -2.53
UBQLN1Q9UMX0 RNU6-592P-201ENST00000411333 103 ntBASIC-0.75□□□□□ -2.53
UBQLN1Q9UMX0 AC008267.6-201ENST00000441664 139 ntBASIC-0.75□□□□□ -2.53
UBQLN1Q9UMX0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.75□□□□□ -2.53
UBQLN1Q9UMX0 SNORD116-10-201ENST00000363791 102 ntBASIC-0.76□□□□□ -2.53
UBQLN1Q9UMX0 SNORD115-23-201ENST00000364461 82 ntBASIC-0.76□□□□□ -2.53
UBQLN1Q9UMX0 RNU6-81P-201ENST00000365608 104 ntBASIC-0.76□□□□□ -2.53
UBQLN1Q9UMX0 MIR590-201ENST00000385008 97 ntBASIC-0.76□□□□□ -2.53
UBQLN1Q9UMX0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms