Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
HDAC9Q9UKV0 RNA5SP25-201ENST00000410815 110 ntBASIC0.28□□□□□ -2.36
HDAC9Q9UKV0 RNA5SP170-201ENST00000517150 101 ntBASIC0.28□□□□□ -2.36
HDAC9Q9UKV0 MIR3140-201ENST00000583685 90 ntBASIC0.28□□□□□ -2.36
HDAC9Q9UKV0 AC069503.3-201ENST00000618674 145 ntBASIC0.28□□□□□ -2.36
HDAC9Q9UKV0 Y_RNA.17-201ENST00000362433 111 ntBASIC0.27□□□□□ -2.37
HDAC9Q9UKV0 Y_RNA.558-201ENST00000384685 113 ntBASIC0.27□□□□□ -2.37
HDAC9Q9UKV0 U3.27-201ENST00000391237 200 ntBASIC0.27□□□□□ -2.37
HDAC9Q9UKV0 U7.6-201ENST00000610841 64 ntBASIC0.27□□□□□ -2.37
HDAC9Q9UKV0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 SNORA63.2-201ENST00000362603 126 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 RNA5SP98-201ENST00000363158 137 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 RNU6-1051P-201ENST00000365471 102 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 MIR519C-201ENST00000385053 87 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 MIR1236-201ENST00000408340 102 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 MIR4460-201ENST00000577862 86 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 MIR4796-201ENST00000580742 81 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
HDAC9Q9UKV0 RNU6-127P-201ENST00000390897 107 ntBASIC0.25□□□□□ -2.37
HDAC9Q9UKV0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.25□□□□□ -2.37
HDAC9Q9UKV0 MIR548AD-201ENST00000584780 82 ntBASIC0.25□□□□□ -2.37
HDAC9Q9UKV0 MIR499B-201ENST00000636498 73 ntBASIC0.25□□□□□ -2.37
HDAC9Q9UKV0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 RNU6-294P-201ENST00000364999 102 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 MIR216B-201ENST00000390186 82 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 RNU6-1052P-201ENST00000411398 104 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 snoU13.17-201ENST00000458802 104 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 RNU6-719P-201ENST00000516671 104 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 YWHAEP2-201ENST00000580066 112 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 MIR548AE1-201ENST00000583292 70 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 MIR548BB-201ENST00000626714 66 ntBASIC0.24□□□□□ -2.37
HDAC9Q9UKV0 Y_RNA.43-201ENST00000362670 111 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 RNU6-161P-201ENST00000363051 106 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 RNU6-54P-201ENST00000365563 107 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 RNU6V-201ENST00000384105 107 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 MIR548H2-201ENST00000408874 88 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 FGF7P7-201ENST00000514120 227 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 RNU5B-6P-201ENST00000516765 68 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 AC140658.3-201ENST00000567603 271 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 MIR4677-201ENST00000584153 80 ntBASIC0.23□□□□□ -2.37
HDAC9Q9UKV0 RNU6-1255P-201ENST00000363434 112 ntBASIC0.22□□□□□ -2.37
HDAC9Q9UKV0 RNU6-1134P-201ENST00000365156 101 ntBASIC0.22□□□□□ -2.37
HDAC9Q9UKV0 SNORA25.13-201ENST00000516395 103 ntBASIC0.22□□□□□ -2.37
HDAC9Q9UKV0 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.22□□□□□ -2.37
HDAC9Q9UKV0 MIR3925-201ENST00000584674 77 ntBASIC0.22□□□□□ -2.37
HDAC9Q9UKV0 AC006160.2-201ENST00000637708 154 ntBASIC0.22□□□□□ -2.37
HDAC9Q9UKV0 Y_RNA.73-201ENST00000362910 113 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 RNU6-624P-201ENST00000363411 107 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 RNA5SP331-201ENST00000364986 107 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 Y_RNA.437-201ENST00000384113 113 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 SNORD42B-201ENST00000458893 67 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 RNU6-758P-201ENST00000516292 89 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 RNU6-762P-201ENST00000517107 102 ntBASIC0.21□□□□□ -2.38
HDAC9Q9UKV0 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 SNORD114-15-201ENST00000364687 72 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 RNU6-979P-201ENST00000383896 107 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 AC093729.1-201ENST00000513074 128 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 RNU6-782P-201ENST00000516852 104 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 MIR4473-201ENST00000583731 91 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 MIR4768-201ENST00000585270 74 ntBASIC0.2□□□□□ -2.38
HDAC9Q9UKV0 RNU6-495P-201ENST00000362995 107 ntBASIC0.19□□□□□ -2.38
HDAC9Q9UKV0 RNU6-824P-201ENST00000363724 104 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 RNA5SP368-201ENST00000364298 116 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 MIR643-201ENST00000385267 97 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 RNU6-1177P-201ENST00000391058 104 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 Y_RNA.611-201ENST00000410682 108 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 MIR5588-201ENST00000581890 63 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 AC062037.1-201ENST00000605302 128 ntBASIC0.18□□□□□ -2.38
HDAC9Q9UKV0 MIR450A2-201ENST00000385022 100 ntBASIC0.17□□□□□ -2.38
HDAC9Q9UKV0 MIR876-201ENST00000401147 81 ntBASIC0.17□□□□□ -2.38
HDAC9Q9UKV0 RNU7-24P-201ENST00000458867 62 ntBASIC0.17□□□□□ -2.38
HDAC9Q9UKV0 MIR371B-201ENST00000638082 66 ntBASIC0.17□□□□□ -2.38
HDAC9Q9UKV0 RNY1P1-201ENST00000364372 112 ntBASIC0.16□□□□□ -2.38
HDAC9Q9UKV0 Y_RNA.407-201ENST00000383986 113 ntBASIC0.16□□□□□ -2.38
HDAC9Q9UKV0 MIR652-201ENST00000385278 98 ntBASIC0.16□□□□□ -2.38
HDAC9Q9UKV0 IGLVI-20-201ENST00000519296 130 ntBASIC0.16□□□□□ -2.38
HDAC9Q9UKV0 U6.81-201ENST00000612550 106 ntBASIC0.16□□□□□ -2.38
HDAC9Q9UKV0 MIR494-201ENST00000349529 81 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 RNU5F-1-201ENST00000362507 117 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 SNORD115-37-201ENST00000363768 82 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 RNU6-478P-201ENST00000363904 110 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 SNORD73B-201ENST00000364394 72 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 SNORD75.2-201ENST00000408784 58 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 RNU7-171P-201ENST00000459581 62 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 AC022137.1-201ENST00000483735 151 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 AC097510.1-201ENST00000510945 133 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 AC104408.1-201ENST00000605241 170 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 IGLL4P-201ENST00000614590 133 ntBASIC0.15□□□□□ -2.39
HDAC9Q9UKV0 SNORD114-31-201ENST00000363219 75 ntBASIC0.14□□□□□ -2.39
HDAC9Q9UKV0 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
HDAC9Q9UKV0 RNU6-382P-201ENST00000365181 106 ntBASIC0.14□□□□□ -2.39
HDAC9Q9UKV0 RNU6-652P-201ENST00000365488 107 ntBASIC0.14□□□□□ -2.39
HDAC9Q9UKV0 RNU6-154P-201ENST00000384306 106 ntBASIC0.14□□□□□ -2.39
HDAC9Q9UKV0 RNU6-1152P-201ENST00000384576 107 ntBASIC0.14□□□□□ -2.39
HDAC9Q9UKV0 MIR516B1-201ENST00000385211 90 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms