Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RNU6-887P-201ENST00000410660 100 ntBASIC-0.31□□□□□ -2.46
Q9N2K0 SNORD4B-201ENST00000459083 72 ntBASIC-0.31□□□□□ -2.46
Q9N2K0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.31□□□□□ -2.46
Q9N2K0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Q9N2K0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
Q9N2K0 RNA5SP25-201ENST00000410815 110 ntBASIC-0.32□□□□□ -2.46
Q9N2K0 SNORD2-201ENST00000459163 69 ntBASIC-0.32□□□□□ -2.46
Q9N2K0 FGF7P7-201ENST00000514120 227 ntBASIC-0.32□□□□□ -2.46
Q9N2K0 RNU6-313P-201ENST00000516317 112 ntBASIC-0.32□□□□□ -2.46
Q9N2K0 AL590491.3-201ENST00000610731 82 ntBASIC-0.32□□□□□ -2.46
Q9N2K0 SNORD42B-201ENST00000458893 67 ntBASIC-0.33□□□□□ -2.46
Q9N2K0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
Q9N2K0 MIR3910-1-201ENST00000580936 111 ntBASIC-0.33□□□□□ -2.46
Q9N2K0 MIR4263-201ENST00000584745 83 ntBASIC-0.33□□□□□ -2.46
Q9N2K0 AC108676.2-201ENST00000605225 163 ntBASIC-0.33□□□□□ -2.46
Q9N2K0 RNU6-132P-201ENST00000383863 107 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Q9N2K0 snoU13.13-201ENST00000458842 104 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 AC114755.3-201ENST00000481111 251 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 MIR3140-201ENST00000583685 90 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 AC104996.3-201ENST00000590718 94 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 AC145423.2-201ENST00000610631 239 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.34□□□□□ -2.46
Q9N2K0 SNORD116-10-201ENST00000363791 102 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 RNY4P3-201ENST00000365254 95 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 SNORD58A-201ENST00000383875 65 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 SNORD56B-201ENST00000384713 71 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 MIR9-2-201ENST00000384838 87 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 MIR196A2-201ENST00000385189 110 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 SNORD90-201ENST00000391145 111 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 SNORA19.1-201ENST00000410656 129 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 MIR3064-201ENST00000581130 66 ntBASIC-0.35□□□□□ -2.47
Q9N2K0 SNORA63.2-201ENST00000362603 126 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 AL603908.1-201ENST00000406098 201 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 AC096531.1-201ENST00000419107 107 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 RNU6-589P-201ENST00000516485 107 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 MIR6129-201ENST00000616087 109 ntBASIC-0.36□□□□□ -2.47
Q9N2K0 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 SNORD95.1-201ENST00000364099 68 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 RNU6-106P-201ENST00000384405 107 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 MIR548E-201ENST00000408287 88 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 MIR5704-201ENST00000584029 77 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 MIR8064-201ENST00000612863 90 ntBASIC-0.37□□□□□ -2.47
Q9N2K0 MIR590-201ENST00000385008 97 ntBASIC-0.38□□□□□ -2.47
Q9N2K0 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
Q9N2K0 RNU6-537P-201ENST00000517277 103 ntBASIC-0.38□□□□□ -2.47
Q9N2K0 RNU6-990P-201ENST00000364385 104 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 SNORD113-1-201ENST00000365321 69 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 RNU6-901P-201ENST00000384593 106 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 RNU6-554P-201ENST00000410466 106 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 RNU2-51P-201ENST00000410708 197 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 MIR4436A-201ENST00000585278 85 ntBASIC-0.39□□□□□ -2.47
Q9N2K0 SNORD115-25-201ENST00000362619 82 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 RNU6-30P-201ENST00000384561 107 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 RNA5SP292-201ENST00000390974 118 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 RNA5SP66-201ENST00000517178 101 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 MIR4432-201ENST00000581823 84 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 MIR8068-201ENST00000618032 68 ntBASIC-0.4□□□□□ -2.47
Q9N2K0 RNU6-766P-201ENST00000362478 107 ntBASIC-0.41□□□□□ -2.48
Q9N2K0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.41□□□□□ -2.48
Q9N2K0 RNU6-284P-201ENST00000411105 106 ntBASIC-0.41□□□□□ -2.48
Q9N2K0 MTATP6P29-201ENST00000415057 132 ntBASIC-0.41□□□□□ -2.48
Q9N2K0 snoU13.19-201ENST00000459148 104 ntBASIC-0.41□□□□□ -2.48
Q9N2K0 SNORD114-15-201ENST00000364687 72 ntBASIC-0.42□□□□□ -2.48
Q9N2K0 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.42□□□□□ -2.48
Q9N2K0 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.42□□□□□ -2.48
Q9N2K0 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.42□□□□□ -2.48
Q9N2K0 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.42□□□□□ -2.48
Q9N2K0 MIR4280-201ENST00000582178 76 ntBASIC-0.42□□□□□ -2.48
Q9N2K0 SNORA3B-201ENST00000391305 131 ntBASIC-0.43□□□□□ -2.48
Q9N2K0 RPS29P8-201ENST00000445109 171 ntBASIC-0.43□□□□□ -2.48
Q9N2K0 RNU7-61P-201ENST00000515897 61 ntBASIC-0.43□□□□□ -2.48
Q9N2K0 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
Q9N2K0 RNU6-900P-201ENST00000384498 102 ntBASIC-0.44□□□□□ -2.48
Q9N2K0 RNU6-158P-201ENST00000517104 100 ntBASIC-0.44□□□□□ -2.48
Q9N2K0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 RNU4-32P-201ENST00000363404 141 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 SNORA19-201ENST00000384737 128 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 MIR203A-201ENST00000384836 110 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 MIR224-201ENST00000384889 81 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 RNU7-24P-201ENST00000458867 62 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.45□□□□□ -2.48
Q9N2K0 SNORA18.5-201ENST00000516616 101 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 RNU6-789P-201ENST00000517105 102 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 MIR2052-201ENST00000636055 55 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 AC093726.3-201ENST00000637588 150 ntBASIC-0.45□□□□□ -2.48
Q9N2K0 RNU6-495P-201ENST00000362995 107 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms