Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU6-519P-201ENST00000410590 108 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU6-175P-201ENST00000516896 107 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU6-789P-201ENST00000517105 102 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU6-766P-201ENST00000362478 107 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU6-54P-201ENST00000365563 107 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 MIR652-201ENST00000385278 98 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 U3.27-201ENST00000391237 200 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 RNU4-61P-201ENST00000411243 107 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 AC104996.3-201ENST00000590718 94 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.13□□□□□ -2.43
ZNF541Q9H0D2 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.14□□□□□ -2.43
ZNF541Q9H0D2 RNA5SP292-201ENST00000390974 118 ntBASIC-0.14□□□□□ -2.43
ZNF541Q9H0D2 RNA5SP266-201ENST00000410273 108 ntBASIC-0.14□□□□□ -2.43
ZNF541Q9H0D2 RPS29P8-201ENST00000445109 171 ntBASIC-0.14□□□□□ -2.43
ZNF541Q9H0D2 FGF7P7-201ENST00000514120 227 ntBASIC-0.14□□□□□ -2.43
ZNF541Q9H0D2 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.15□□□□□ -2.43
ZNF541Q9H0D2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
ZNF541Q9H0D2 RNU6-811P-201ENST00000384069 107 ntBASIC-0.15□□□□□ -2.43
ZNF541Q9H0D2 AC026421.1-201ENST00000519101 163 ntBASIC-0.15□□□□□ -2.43
ZNF541Q9H0D2 MIR3140-201ENST00000583685 90 ntBASIC-0.15□□□□□ -2.43
ZNF541Q9H0D2 SNORD114-29-201ENST00000364819 70 ntBASIC-0.16□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.16□□□□□ -2.44
ZNF541Q9H0D2 MIR548U-201ENST00000390728 81 ntBASIC-0.16□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.16□□□□□ -2.44
ZNF541Q9H0D2 RNU6-162P-201ENST00000516228 103 ntBASIC-0.16□□□□□ -2.44
ZNF541Q9H0D2 MIR148A-201ENST00000362215 68 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 MIR450A1-201ENST00000362262 91 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 SNORD116-10-201ENST00000363791 102 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 SNORD90-201ENST00000391145 111 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 SNORD42B-201ENST00000458893 67 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 RNU6-762P-201ENST00000517107 102 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 U7.3-201ENST00000616123 62 ntBASIC-0.17□□□□□ -2.44
ZNF541Q9H0D2 SNORA63.2-201ENST00000362603 126 ntBASIC-0.18□□□□□ -2.44
ZNF541Q9H0D2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.18□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.18□□□□□ -2.44
ZNF541Q9H0D2 MIR6507-201ENST00000613630 70 ntBASIC-0.18□□□□□ -2.44
ZNF541Q9H0D2 SNORD49B-201ENST00000365172 72 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 RNU6-46P-201ENST00000383860 107 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 SNORA24B-201ENST00000384176 131 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 AL031737.1-201ENST00000450125 223 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 SNORA18.5-201ENST00000516616 101 ntBASIC-0.19□□□□□ -2.44
ZNF541Q9H0D2 MIR20A-201ENST00000362279 71 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 RNU4-32P-201ENST00000363404 141 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 RNA5SP451-201ENST00000410588 110 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 MTATP8P2-201ENST00000435212 202 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.2□□□□□ -2.44
ZNF541Q9H0D2 RNU6-755P-201ENST00000364400 103 ntBASIC-0.21□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.21□□□□□ -2.44
ZNF541Q9H0D2 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.21□□□□□ -2.44
ZNF541Q9H0D2 SNORD20-201ENST00000384550 80 ntBASIC-0.21□□□□□ -2.44
ZNF541Q9H0D2 AC244250.2-201ENST00000418731 148 ntBASIC-0.21□□□□□ -2.44
ZNF541Q9H0D2 RNU6-158P-201ENST00000517104 100 ntBASIC-0.21□□□□□ -2.44
ZNF541Q9H0D2 MIR655-201ENST00000362159 97 ntBASIC-0.22□□□□□ -2.44
ZNF541Q9H0D2 RNU6-215P-201ENST00000365169 102 ntBASIC-0.22□□□□□ -2.44
ZNF541Q9H0D2 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.22□□□□□ -2.44
ZNF541Q9H0D2 AC244090.1-201ENST00000441884 93 ntBASIC-0.22□□□□□ -2.44
ZNF541Q9H0D2 U2.22-201ENST00000636441 106 ntBASIC-0.22□□□□□ -2.44
ZNF541Q9H0D2 SNORA63.4-201ENST00000362763 126 ntBASIC-0.23□□□□□ -2.45
ZNF541Q9H0D2 MIR582-201ENST00000365731 98 ntBASIC-0.23□□□□□ -2.45
ZNF541Q9H0D2 SNORA49-201ENST00000386157 136 ntBASIC-0.23□□□□□ -2.45
ZNF541Q9H0D2 RNU6-495P-201ENST00000362995 107 ntBASIC-0.24□□□□□ -2.45
ZNF541Q9H0D2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
ZNF541Q9H0D2 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.24□□□□□ -2.45
ZNF541Q9H0D2 AP001318.4-201ENST00000616637 121 ntBASIC-0.24□□□□□ -2.45
ZNF541Q9H0D2 MIR548E-201ENST00000408287 88 ntBASIC-0.25□□□□□ -2.45
ZNF541Q9H0D2 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.26□□□□□ -2.45
ZNF541Q9H0D2 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
ZNF541Q9H0D2 AC097510.1-201ENST00000510945 133 ntBASIC-0.26□□□□□ -2.45
ZNF541Q9H0D2 AC145423.2-201ENST00000610631 239 ntBASIC-0.26□□□□□ -2.45
ZNF541Q9H0D2 SNORD114-4-201ENST00000363962 75 ntBASIC-0.27□□□□□ -2.45
ZNF541Q9H0D2 MTATP6P29-201ENST00000415057 132 ntBASIC-0.27□□□□□ -2.45
ZNF541Q9H0D2 snoU13.17-201ENST00000458802 104 ntBASIC-0.27□□□□□ -2.45
ZNF541Q9H0D2 RNU6-919P-201ENST00000516731 104 ntBASIC-0.27□□□□□ -2.45
ZNF541Q9H0D2 SNORD115-27-201ENST00000364430 82 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 MIR224-201ENST00000384889 81 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 MIR548AX-201ENST00000580117 73 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 MIR4796-201ENST00000580742 81 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 MIR4723-201ENST00000585070 81 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 MIR8064-201ENST00000612863 90 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 MIR2052-201ENST00000636055 55 ntBASIC-0.28□□□□□ -2.45
ZNF541Q9H0D2 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.29□□□□□ -2.46
ZNF541Q9H0D2 RNU6-147P-201ENST00000383983 107 ntBASIC-0.29□□□□□ -2.46
ZNF541Q9H0D2 MIR1236-201ENST00000408340 102 ntBASIC-0.29□□□□□ -2.46
ZNF541Q9H0D2 RNU7-153P-201ENST00000516455 62 ntBASIC-0.29□□□□□ -2.46
ZNF541Q9H0D2 MIR548AI-201ENST00000579940 88 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms