Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-495P-201ENST00000362995 107 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD114-4-201ENST00000363962 75 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 RNU6-746P-201ENST00000384112 109 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 RNU6-209P-201ENST00000384118 107 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 MIR1468-201ENST00000410600 86 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD2-201ENST00000459163 69 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 RNU6-904P-201ENST00000516206 101 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD56B-201ENST00000384713 71 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU4-63P-201ENST00000411313 118 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-719P-201ENST00000516671 104 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-537P-201ENST00000517277 103 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 AP000676.1-201ENST00000533307 52 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 MIR3140-201ENST00000583685 90 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 AC104996.3-201ENST00000590718 94 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-502P-201ENST00000362419 108 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU4-36P-201ENST00000364294 144 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-880P-201ENST00000384526 107 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
FOXC2Q99958 AC097510.1-201ENST00000510945 133 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-795P-201ENST00000516323 103 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-62P-201ENST00000516526 102 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-762P-201ENST00000517107 102 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-81P-201ENST00000365608 104 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 SNORD58A-201ENST00000383875 65 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 SNORD116-21-201ENST00000384507 92 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 MIR548U-201ENST00000390728 81 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU7-24P-201ENST00000458867 62 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 FGF7P7-201ENST00000514120 227 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU6-412P-201ENST00000516434 106 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 SNORA40.17-201ENST00000517256 115 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-959P-201ENST00000384671 107 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-476P-201ENST00000384726 107 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNA5SP292-201ENST00000390974 118 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 SNORD90-201ENST00000391145 111 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 SNORA19.1-201ENST00000410656 129 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 SCARNA23-201ENST00000516060 130 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.48□□□□□ -2.49
FOXC2Q99958 snoU13.13-201ENST00000458842 104 ntBASIC-0.48□□□□□ -2.49
FOXC2Q99958 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
FOXC2Q99958 RNU6-774P-201ENST00000363238 107 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 SNORA32.3-201ENST00000384772 121 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 RNU6-972P-201ENST00000391208 107 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 RNU6-519P-201ENST00000410590 108 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 RNA5SP169-201ENST00000517268 117 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 MIR3668-201ENST00000582138 75 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 MIR6851-201ENST00000617060 67 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 AL391099.1-201ENST00000624635 187 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 AC093726.3-201ENST00000637588 150 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 SNORD114-14-201ENST00000362723 75 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 RNU6-973P-201ENST00000364690 107 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 MT-TR-201ENST00000387439 65 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 RNU6-887P-201ENST00000410660 100 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 AC114755.3-201ENST00000481111 251 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 SNORA18.5-201ENST00000516616 101 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 MT-TQ-201ENST00000387372 72 ntBASIC-0.51□□□□□ -2.49
FOXC2Q99958 RNU6-337P-201ENST00000391243 106 ntBASIC-0.51□□□□□ -2.49
FOXC2Q99958 SNORD75.2-201ENST00000408784 58 ntBASIC-0.51□□□□□ -2.49
FOXC2Q99958 RNU6-106P-201ENST00000384405 107 ntBASIC-0.52□□□□□ -2.49
FOXC2Q99958 MIR590-201ENST00000385008 97 ntBASIC-0.52□□□□□ -2.49
FOXC2Q99958 MIR6773-201ENST00000612812 74 ntBASIC-0.52□□□□□ -2.49
FOXC2Q99958 SNORD115-23-201ENST00000364461 82 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 AC008267.6-201ENST00000441664 139 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 AC026421.1-201ENST00000519101 163 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 SNORD116-10-201ENST00000363791 102 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 RNU6-990P-201ENST00000364385 104 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
FOXC2Q99958 SNORD75.1-201ENST00000408373 60 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 RNU6-592P-201ENST00000411333 103 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.54□□□□□ -2.5
FOXC2Q99958 SNORD38.3-201ENST00000516599 73 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 AL365222.1-201ENST00000614661 98 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-382P-201ENST00000365181 106 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-901P-201ENST00000384593 106 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 MIRLET7B-201ENST00000385140 83 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 MIR1302-5-201ENST00000408164 150 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-554P-201ENST00000410466 106 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 MTATP6P29-201ENST00000415057 132 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 AL445193.1-201ENST00000441183 141 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 snoU13.17-201ENST00000458802 104 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms