Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MIR582-201ENST00000365731 98 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 MIR224-201ENST00000384889 81 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 RNU6-284P-201ENST00000411105 106 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 RPS29P8-201ENST00000445109 171 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 SNORA40.17-201ENST00000517256 115 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 MIR4432-201ENST00000581823 84 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 AC012531.4-201ENST00000616509 177 ntBASIC-0.68□□□□□ -2.52
SSX3Q99909 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.69□□□□□ -2.52
SSX3Q99909 uc_338.36-201ENST00000622331 158 ntBASIC-0.69□□□□□ -2.52
SSX3Q99909 RNU6-774P-201ENST00000363238 107 ntBASIC-0.7□□□□□ -2.52
SSX3Q99909 SCARNA23-201ENST00000516060 130 ntBASIC-0.7□□□□□ -2.52
SSX3Q99909 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.7□□□□□ -2.52
SSX3Q99909 MIR3140-201ENST00000583685 90 ntBASIC-0.7□□□□□ -2.52
SSX3Q99909 AC145423.2-201ENST00000610631 239 ntBASIC-0.7□□□□□ -2.52
SSX3Q99909 RNY4P3-201ENST00000365254 95 ntBASIC-0.71□□□□□ -2.52
SSX3Q99909 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.71□□□□□ -2.52
SSX3Q99909 snoU13.13-201ENST00000458842 104 ntBASIC-0.71□□□□□ -2.52
SSX3Q99909 HAR1A.1-201ENST00000459583 118 ntBASIC-0.71□□□□□ -2.52
SSX3Q99909 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.72□□□□□ -2.52
SSX3Q99909 RNU6-746P-201ENST00000384112 109 ntBASIC-0.72□□□□□ -2.52
SSX3Q99909 SNORD56B-201ENST00000384713 71 ntBASIC-0.72□□□□□ -2.52
SSX3Q99909 RNU6-972P-201ENST00000391208 107 ntBASIC-0.72□□□□□ -2.52
SSX3Q99909 RNU7-55P-201ENST00000459426 62 ntBASIC-0.72□□□□□ -2.52
SSX3Q99909 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.73□□□□□ -2.53
SSX3Q99909 MIR204-201ENST00000385200 110 ntBASIC-0.73□□□□□ -2.53
SSX3Q99909 SNORA19.1-201ENST00000410656 129 ntBASIC-0.73□□□□□ -2.53
SSX3Q99909 AC097510.1-201ENST00000510945 133 ntBASIC-0.73□□□□□ -2.53
SSX3Q99909 RNU6-904P-201ENST00000516206 101 ntBASIC-0.73□□□□□ -2.53
SSX3Q99909 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.73□□□□□ -2.53
SSX3Q99909 RNU6-495P-201ENST00000362995 107 ntBASIC-0.74□□□□□ -2.53
SSX3Q99909 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.74□□□□□ -2.53
SSX3Q99909 RNU6-887P-201ENST00000410660 100 ntBASIC-0.74□□□□□ -2.53
SSX3Q99909 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.74□□□□□ -2.53
SSX3Q99909 RNU6-62P-201ENST00000516526 102 ntBASIC-0.74□□□□□ -2.53
SSX3Q99909 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.74□□□□□ -2.53
SSX3Q99909 SNORD114-15-201ENST00000364687 72 ntBASIC-0.75□□□□□ -2.53
SSX3Q99909 RNA5SP292-201ENST00000390974 118 ntBASIC-0.75□□□□□ -2.53
SSX3Q99909 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 SNORD58A-201ENST00000383875 65 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 RNU6-959P-201ENST00000384671 107 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 MIR1302-5-201ENST00000408164 150 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 MTATP6P29-201ENST00000415057 132 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 snoU13.19-201ENST00000459148 104 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.76□□□□□ -2.53
SSX3Q99909 SNORA18.5-201ENST00000516616 101 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 MIR4280-201ENST00000582178 76 ntBASIC-0.76□□□□□ -2.53
SSX3Q99909 RNU6-502P-201ENST00000362419 108 ntBASIC-0.77□□□□□ -2.53
SSX3Q99909 RNU6-973P-201ENST00000364690 107 ntBASIC-0.77□□□□□ -2.53
SSX3Q99909 SNORA63.6-201ENST00000364921 119 ntBASIC-0.77□□□□□ -2.53
SSX3Q99909 SNORA24B-201ENST00000384176 131 ntBASIC-0.77□□□□□ -2.53
SSX3Q99909 AC008267.6-201ENST00000441664 139 ntBASIC-0.77□□□□□ -2.53
SSX3Q99909 RNU4-32P-201ENST00000363404 141 ntBASIC-0.78□□□□□ -2.53
SSX3Q99909 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.78□□□□□ -2.53
SSX3Q99909 AL391099.1-201ENST00000624635 187 ntBASIC-0.78□□□□□ -2.53
SSX3Q99909 SNORA3B-201ENST00000391305 131 ntBASIC-0.79□□□□□ -2.54
SSX3Q99909 SNORD75.2-201ENST00000408784 58 ntBASIC-0.79□□□□□ -2.54
SSX3Q99909 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
SSX3Q99909 RNU7-24P-201ENST00000458867 62 ntBASIC-0.79□□□□□ -2.54
SSX3Q99909 RNA5SP169-201ENST00000517268 117 ntBASIC-0.79□□□□□ -2.54
SSX3Q99909 MIR6851-201ENST00000617060 67 ntBASIC-0.79□□□□□ -2.54
SSX3Q99909 SNORD114-14-201ENST00000362723 75 ntBASIC-0.8□□□□□ -2.54
SSX3Q99909 SNORD116-10-201ENST00000363791 102 ntBASIC-0.8□□□□□ -2.54
SSX3Q99909 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.8□□□□□ -2.54
SSX3Q99909 RNU6-476P-201ENST00000384726 107 ntBASIC-0.8□□□□□ -2.54
SSX3Q99909 SNORD38.3-201ENST00000516599 73 ntBASIC-0.8□□□□□ -2.54
SSX3Q99909 SNORD75.1-201ENST00000408373 60 ntBASIC-0.81□□□□□ -2.54
SSX3Q99909 AC021146.6-201ENST00000514659 117 ntBASIC-0.81□□□□□ -2.54
SSX3Q99909 snoR1.1-201ENST00000628177 80 ntBASIC-0.81□□□□□ -2.54
SSX3Q99909 RNU5F-1-201ENST00000362507 117 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 MIR590-201ENST00000385008 97 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 MT-TQ-201ENST00000387372 72 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 AC006254.2-201ENST00000603259 279 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 MIR6773-201ENST00000612812 74 ntBASIC-0.82□□□□□ -2.54
SSX3Q99909 RNU6-990P-201ENST00000364385 104 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 RNU6-30P-201ENST00000384561 107 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 SNORD90-201ENST00000391145 111 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 RNU4-63P-201ENST00000411313 118 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 SNORA13-201ENST00000458790 133 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 RNU7-61P-201ENST00000515897 61 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 AC026421.1-201ENST00000519101 163 ntBASIC-0.83□□□□□ -2.54
SSX3Q99909 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.84□□□□□ -2.54
SSX3Q99909 AC021146.9-201ENST00000512503 156 ntBASIC-0.84□□□□□ -2.54
SSX3Q99909 RNU6-81P-201ENST00000365608 104 ntBASIC-0.85□□□□□ -2.55
SSX3Q99909 MT-TR-201ENST00000387439 65 ntBASIC-0.85□□□□□ -2.55
SSX3Q99909 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.85□□□□□ -2.55
SSX3Q99909 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.85□□□□□ -2.55
SSX3Q99909 AL365222.1-201ENST00000614661 98 ntBASIC-0.85□□□□□ -2.55
SSX3Q99909 RNU6-382P-201ENST00000365181 106 ntBASIC-0.86□□□□□ -2.55
SSX3Q99909 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
SSX3Q99909 RNU6-537P-201ENST00000517277 103 ntBASIC-0.86□□□□□ -2.55
SSX3Q99909 MIR5704-201ENST00000584029 77 ntBASIC-0.86□□□□□ -2.55
SSX3Q99909 MIR6854-201ENST00000614935 69 ntBASIC-0.86□□□□□ -2.55
SSX3Q99909 MIR518B-201ENST00000385127 83 ntBASIC-0.87□□□□□ -2.55
SSX3Q99909 MIRLET7B-201ENST00000385140 83 ntBASIC-0.87□□□□□ -2.55
SSX3Q99909 MIR548M-201ENST00000408260 86 ntBASIC-0.87□□□□□ -2.55
SSX3Q99909 RNU6-554P-201ENST00000410466 106 ntBASIC-0.87□□□□□ -2.55
SSX3Q99909 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms