Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR4484-201ENST00000582855 83 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR1297-201ENST00000637311 77 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 MIR6759-201ENST00000638110 65 ntBASIC0.64□□□□□ -2.31
SNED1Q8TER0 SNORD18A-201ENST00000363753 72 ntBASIC0.63□□□□□ -2.31
SNED1Q8TER0 RNU6-681P-201ENST00000364012 104 ntBASIC0.63□□□□□ -2.31
SNED1Q8TER0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNED1Q8TER0 MIR617-201ENST00000385030 97 ntBASIC0.63□□□□□ -2.31
SNED1Q8TER0 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
SNED1Q8TER0 RNU6-303P-201ENST00000517091 106 ntBASIC0.63□□□□□ -2.31
SNED1Q8TER0 MIR548AG2-201ENST00000581228 64 ntBASIC0.63□□□□□ -2.31
SNED1Q8TER0 RNA5SP63-201ENST00000391225 112 ntBASIC0.62□□□□□ -2.31
SNED1Q8TER0 RNU2-59P-201ENST00000410482 191 ntBASIC0.62□□□□□ -2.31
SNED1Q8TER0 SCARNA18B-201ENST00000458806 135 ntBASIC0.62□□□□□ -2.31
SNED1Q8TER0 MIR4514-201ENST00000581410 57 ntBASIC0.62□□□□□ -2.31
SNED1Q8TER0 RNU6-340P-201ENST00000364005 107 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 MIR519E-201ENST00000385075 84 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 MIR216B-201ENST00000390186 82 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 RNU6-1177P-201ENST00000391058 104 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 RNU7-74P-201ENST00000459104 62 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 RNA5SP47-201ENST00000517230 109 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 AC243829.6-201ENST00000612652 106 ntBASIC0.61□□□□□ -2.31
SNED1Q8TER0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SNED1Q8TER0 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 RNU6-726P-201ENST00000364680 107 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 SNORA24B-201ENST00000384176 131 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 Y_RNA.565-201ENST00000384719 101 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SNED1Q8TER0 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 RNU6-70P-201ENST00000516438 60 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 SNORA62.5-201ENST00000516634 120 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 MIR3134-201ENST00000579433 74 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
SNED1Q8TER0 RNU6-824P-201ENST00000363724 104 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 SNORA8.1-201ENST00000384250 140 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 Y_RNA.532-201ENST00000384590 113 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 SNORD41.1-201ENST00000391000 69 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 Y_RNA.606-201ENST00000410579 103 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 AC074348.1-201ENST00000426503 132 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.59□□□□□ -2.31
SNED1Q8TER0 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 Y_RNA.788-201ENST00000622394 112 ntBASIC0.59□□□□□ -2.31
SNED1Q8TER0 Y_RNA.545-201ENST00000384652 105 ntBASIC0.58□□□□□ -2.32
SNED1Q8TER0 snoU13.19-201ENST00000459148 104 ntBASIC0.58□□□□□ -2.32
SNED1Q8TER0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.58□□□□□ -2.32
SNED1Q8TER0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.58□□□□□ -2.32
SNED1Q8TER0 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
SNED1Q8TER0 MIR4773-1-201ENST00000637203 78 ntBASIC0.58□□□□□ -2.32
SNED1Q8TER0 RNU6-330P-201ENST00000363015 107 ntBASIC0.57□□□□□ -2.32
SNED1Q8TER0 RNU4-45P-201ENST00000365469 141 ntBASIC0.57□□□□□ -2.32
SNED1Q8TER0 RNA5SP227-201ENST00000516184 113 ntBASIC0.57□□□□□ -2.32
SNED1Q8TER0 MIR3675-201ENST00000583661 73 ntBASIC0.57□□□□□ -2.32
SNED1Q8TER0 RNU6-382P-201ENST00000365181 106 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 RNU6-154P-201ENST00000384306 106 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 RNU6-411P-201ENST00000384451 107 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SNED1Q8TER0 RNU6-269P-201ENST00000391077 97 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.56□□□□□ -2.32
SNED1Q8TER0 MIR4460-201ENST00000577862 86 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 U6.81-201ENST00000612550 106 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 MIR548O2-201ENST00000616090 70 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 MIR664A-201ENST00000626086 82 ntBASIC0.56□□□□□ -2.32
SNED1Q8TER0 RNU1-141P-201ENST00000364623 158 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 SNORA36.2-201ENST00000384004 127 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 AC073261.1-201ENST00000429409 121 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 AL691482.2-201ENST00000457453 84 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 RNU6-274P-201ENST00000459566 107 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 RNA5SP268-201ENST00000516828 124 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SNED1Q8TER0 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
SNED1Q8TER0 RNU6-495P-201ENST00000362995 107 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 SNORA36.1-201ENST00000363424 132 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 RNU6V-201ENST00000384105 107 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 AC093423.1-201ENST00000440817 142 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 RNA5SP94-201ENST00000516917 108 ntBASIC0.55□□□□□ -2.32
SNED1Q8TER0 MIR329-2-201ENST00000385029 84 ntBASIC0.54□□□□□ -2.32
SNED1Q8TER0 MT-TY-201ENST00000387409 66 ntBASIC0.54□□□□□ -2.32
SNED1Q8TER0 RNU6-523P-201ENST00000516304 54 ntBASIC0.54□□□□□ -2.32
SNED1Q8TER0 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
SNED1Q8TER0 NAMPTP3-201ENST00000569273 224 ntBASIC0.54□□□□□ -2.32
SNED1Q8TER0 RNA5SP331-201ENST00000364986 107 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 RNU6-54P-201ENST00000365563 107 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 SNORD75.2-201ENST00000408784 58 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 RNU7-24P-201ENST00000458867 62 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 RNU5B-6P-201ENST00000516765 68 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 RNU6-1015P-201ENST00000517121 99 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 AL162376.1-201ENST00000624117 175 ntBASIC0.53□□□□□ -2.32
SNED1Q8TER0 SNORD45.1-201ENST00000363181 77 ntBASIC0.52□□□□□ -2.33
SNED1Q8TER0 MIR154-201ENST00000385243 84 ntBASIC0.52□□□□□ -2.33
SNED1Q8TER0 RNU6-587P-201ENST00000391282 106 ntBASIC0.52□□□□□ -2.33
SNED1Q8TER0 RNA5SP484-201ENST00000458857 111 ntBASIC0.52□□□□□ -2.33
SNED1Q8TER0 RNU6-687P-201ENST00000516443 89 ntBASIC0.52□□□□□ -2.33
SNED1Q8TER0 MIR5589-201ENST00000579442 60 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms